LOC110525573 (LOC106585515)


Basic Information

Item Value
gene id LOC110525573
gene name LOC106585515
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 24080291 ~ 24122599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605789.2
TCACGGATGTGCAGATTAAATAAGTGGCAAAACCATTCTCATTTGTCAAAAATGGCCAAAAACACATCCCTATATTTCCGTATTGTAGAGGGCAGGAGCCTACCAGTCAAAGACGTCTCTGGGACCAGTGACCCATACTGCATTGTAAAAGTTGACAATGAAGTTGTGGCCAGGACAGCCACAGTGTGGAAGAACCTCAACCCTTTCTGGGGAGAAGAATACACCCTGCACCTCCCGACGGGGTTCCACTCGCTCTCCTTCTATGTCATGGATGAGGACACCATTGGCCATGATGACATCATTGGAAAGATATCGCTGAGCAAAGACACCATCGGGGCCAAGGTTAAAGGGCTGGATAACTGGCTGAATCTGACCCGGGTGGACCCGGATGAGGAGGTGCAGGGGGAGATCCACTTTGGTCTGGAGCTTCTCAGAGATGCCAAAGGTATAGGACTACGATGCCATTTCATAGAGGCCAGAGACTTGGCACCAAGAGACATTTCTGGAACCTCTGATCCCTTTGCCAGAATCCTCTTCAataaccacagtgcagagacttcgATCATTAAAAAGACTCGTTACCCACACTGGGGTGAGACCCTGGAGTTGGAGCTTGAGACAGAGGAGCTGTCTGagggagggacagtcacagtggaGGTCTGGGACTGGGACATGGTGGGCAAAAATGACTTCCTGGGAAAGGTGGAAATCCCTTTTGCTTGCCTGCACAAGACACCTCTGGTACAGGGTTGGTTTCGTCTGATGCCCCTGGGAAACAATGAGGATGATGCTGGAGGTAAGCTGGGTGCGCTGCGACTGAAGGTGCGTCTGGTGGAGGACCATATTCTTCCCTCCATGTACTACCAGCCTCTCATTGACCTGCTGGTGCAGTCAGTCATCTCTCCTGCTGAGGTGGAGGACGGCAGCCCCCTGACCATGTTGGAGGAGGTGACCACAGTGGAGAGCCGGCAGGACGTGGCCATGACCCTGGTCAAGATCTACCTGGGGCGGGGCCTGGTGGTGCCCTTTCTGGACTACCTAAACACCCGCGAGGTCAACCACACCTTGGATCCAAACACCCTGTTCCGGTCCAACTCTCTAGCTTCTAAGGCCATGGAACAGTTCATGAAGGCTGTGGGGATGCTGTACCTTCATGAGGTCCTGAAGCCCATCATTAACCGCATCTTTGAGGAGAAGAAGTACATTGAGCTGGACCCGTGTAAAATTGACCTGAACAGAACCAGgcGTATCTCATTTAAAGGTGCGGTGTCTGAGGCTGAGGTGAGGGAGAGCAGTGTGGAGATGCTGCAGGGCTATCTGTCTAACATCGTGGAGTCCATCATTGGGTCAGTTACCCAGTGTCCACCTGTCATGAGGGTGGCCTTCAAACAGCTGCACAAGAGGGTGGAGGAGCAGTTCCCTGAGTCAGAAAATGAGGATGTGAAGTATCTGGCCATCAGTGGGTTTTTCTTCCTGCGTTTCCTTGCCCCTGCTATCCTCACACCCAAGCTCTTTCACCTGAGGGACCAGCATGCAGATACACGCACCAGCAGGACACTGTTACTACTGGCCAAGGCAGTGCAGAGTGTGGGGAACCTGGGTTTGCAGCTGGGCCACGGTAAGGAGCTGTGGATGGAGCCCTTGCATCCCATCATCCTTTATAGCGTGGCCTCTGTTAAAGACTTCCTGGACAAGCTCATCGACATTGATAGCGtgtCAGAGGTGCCCCAGAGGGCTGTGTTCCTTCCCTCAGTGACAGTGAAGGAGGGCTATCTCCAGAAGCACAAGGCCGAAAGCCCCCAGCTCCTGTCCCGCTTTTCCTTCAAGAAGCGATACTTCTGGCTGAGCAGTGAGACACTGTCCTATGCCAAGACCCCGGATCCCTGGCAGGTGCgctcctccatccccatccagtgtgtgtgtgctgtggagAGAGTGGATGAGAATGCCTTCCAACAGCAGCATGTGTTGCAGGTCGTCACCCAGGACAACGATGGACAGATGCACACCATCTATACCCAGTGCAAGaaTGTGAATGAGTTGAACCAGTGGCTGTCAGCCATCAGGAAGGCCAGTATCTACAACAGGCGCATGCTGCCCTCCTTCCACCCAGGGGTGTACCGAAGTGGCAAGTGGACCTGCTGCCTACAGGCTGATCGCGCAACTTCAGGTTGCAGTCGCACTCACTCTGCAGTGACTCTGGGCGACTGGAGTGACCCATTAGATCCAGACGCAGAGACCCAGACCATCTACAAACAGCTTCTTCAGGGAAGAGACAAGCTCAGGAAACAGTATGTGGAGGTGGAGGCTGAGATGACCACAGAGGAAGAGAATAGAGTGAACTCTGGGCTGCTCCCTGatgGAGCAGACTGTAGCGTGGAGCTCCTGAAGCACAGGCAAGCTGCAGCGGTTCGGCTACTTGGAGTGgttctggatctggagcaggccCATGCCACCTTCCAGCGGCAggaaagagtggaggctggtagCCTCATCCTGACCCCCTAGATTGGGCCTTCCCTGGGGCCTGAGCCCGGGTCTGAAGGGGAGAGCAGCGTCCTGTATCAGACTCAATGGAGTAGGAAAACTAAGCGACCACAGAAGGAAGGCagcctctccctgctccctgtcATGTTGTCTGTTACATGTGATGTCTAGAGGAACTCTCTTCTCATCCAGATCACTTCTTCATAAGCCAGAATGAAGAGGATACCCATTCTGTAACATCCTTTTCCTGGGATGTTTGATATCACACACACTGGTTTTCAGCTGTGGCGGAGAAGTTATCTAGTGAAATAACTGATTGCCACAGGTCTTGCATTCAGATGAACTGCCACATAAACTTCTGCTACTCTCCCAAAGCTTGGGTTCTTATTGATTGAGCAGGAAACAAACTGTTATGTGGAACTGAGCTGAAGCAGGGGCACGCATGGAGTGTGTCATTCCGTGGTACTGCATTATTGTATGGCTATCAAGGAATGCAGTGCATGCCCTGCATCCAGCGTCTGTTAAATGTGAATAATTTTGTTTATATTCAAATCATTATATGGGTCGTTCCAGCAATTCGGTGCCTTTTAAGAAGTGtaacttggtaaaaaaaaaaaaaaaactttggatttcacctcattttagcattctgtcataaagagcacacgttttcccatctcaagaggttcaaT

Function

NR:

description
rasGAP-activating-like protein 1

GO: NA

KEGG:

id description
K17632 RASAL1; RAS protein activator-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605789.2 True 3179 mRNA 0.52 21 24080291 24122599

Neighbor

gene id symbol gene type direction distance location
LOC110525569 LOC106585512 coding upstream 34089 24042520 ~ 24046202 (+)
LOC110525570 LOC106585512 coding upstream 37932 24042029 ~ 24042359 (+)
LOC110525298 LOC106585338 coding upstream 138413 23925846 ~ 23941878 (+)
LOC110525563 LOC106585507 coding upstream 165994 23911741 ~ 23914297 (+)
LOC110525560 LOC106585504 coding upstream 195323 23857854 ~ 23884968 (+)
rflna LOC106585519 coding downstream 179137 24301736 ~ 24314535 (+)
stx2b LOC106585525 coding downstream 593747 24716346 ~ 24724878 (+)
LOC110525587 LOC106585527 coding downstream 611233 24733832 ~ 24872673 (+)
LOC110525720 LOC106585530 coding downstream 874965 24997564 ~ 25054975 (+)
LOC110525590 LOC106585531 coding downstream 992784 25115383 ~ 25162130 (+)
G487362 LOC106585514 non-coding upstream 17509 24059920 ~ 24062782 (+)
G487341 LOC106585510 non-coding upstream 45865 24033719 ~ 24034426 (+)
G487334 NA non-coding upstream 58191 24019541 ~ 24022100 (+)
G487331 NA non-coding upstream 63517 24016212 ~ 24016774 (+)
G487330 NA non-coding upstream 66484 24013410 ~ 24013807 (+)
G487401 LOC106585516 non-coding downstream 6816 24129415 ~ 24134143 (+)
G487442 NA non-coding downstream 81266 24203865 ~ 24204080 (+)
G487372 NA non-coding downstream 84425 24207024 ~ 24209275 (+)
G487453 NA non-coding downstream 102046 24224645 ~ 24224959 (+)
G487455 NA non-coding downstream 103664 24226263 ~ 24226582 (+)
G487146 LOC106585492 other upstream 412364 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 548492 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 888374 23079630 ~ 23197514 (+)
G486127 NA other upstream 1405839 22674242 ~ 22674452 (+)
G488049 NA other downstream 457362 24579961 ~ 24586313 (+)
G488078 NA other downstream 508370 24630969 ~ 24631396 (+)
G488258 NA other downstream 816170 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1516262 25638816 ~ 25641178 (+)
G489447 NA other downstream 1561087 25683686 ~ 25684311 (+)

Expression


Co-expression Network