Item | Value |
---|---|
gene id | LOC110525585 |
gene name | LOC106585524 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 24655788 ~ 24715090 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
adhesion G-protein coupled receptor D1-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036979707.1 | False | 4967 | mRNA | 0.45 | 26 | 24655788 | 24715088 |
XM_036979708.1 | False | 4899 | mRNA | 0.45 | 25 | 24655788 | 24715089 |
XM_036979705.1 | False | 4999 | mRNA | 0.45 | 26 | 24655788 | 24715090 |
XM_036979706.1 | False | 4981 | mRNA | 0.45 | 26 | 24655788 | 24715090 |
TU555289 | False | 891 | TUCP | 0.54 | 4 | 24660897 | 24674901 |
TU555288 | False | 981 | TUCP | 0.47 | 4 | 24706571 | 24709420 |
TU555287 | True | 514 | lncRNA | 0.34 | 2 | 24714447 | 24715051 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ep400 | LOC106579917 | coding | downstream | 21430 | 24597970 ~ 24634358 (-) |
LOC118965071 | LOC106585477 | coding | downstream | 76415 | 24578705 ~ 24579373 (-) |
LOC118965019 | LOC106585477 | coding | downstream | 89464 | 24557487 ~ 24566324 (-) |
ncor2 | LOC106585520 | coding | downstream | 151665 | 24317912 ~ 24504123 (-) |
ccdc92 | LOC106585518 | coding | downstream | 431528 | 24211144 ~ 24224260 (-) |
piwil1 | piwil1 | coding | upstream | 158133 | 24873223 ~ 24885005 (-) |
LOC110525589 | LOC106585529 | coding | upstream | 196537 | 24911627 ~ 24917852 (-) |
LOC110525591 | LOC106579906 | coding | upstream | 457771 | 25172861 ~ 25375482 (-) |
LOC110525597 | NA | coding | upstream | 733929 | 25449019 ~ 25451212 (-) |
LOC110525601 | LOC106585539 | coding | upstream | 928142 | 25643232 ~ 25660249 (-) |
G488508 | NA | non-coding | downstream | 11571 | 24643709 ~ 24644217 (-) |
G488507 | NA | non-coding | downstream | 13009 | 24642217 ~ 24642779 (-) |
G488506 | NA | non-coding | downstream | 13604 | 24641958 ~ 24642184 (-) |
G488505 | NA | non-coding | downstream | 15033 | 24640525 ~ 24640755 (-) |
G488487 | NA | non-coding | downstream | 59728 | 24592542 ~ 24596060 (-) |
G488574 | NA | non-coding | upstream | 29772 | 24744862 ~ 24788105 (-) |
G488618 | NA | non-coding | upstream | 84426 | 24799516 ~ 24800711 (-) |
G488620 | NA | non-coding | upstream | 88476 | 24803566 ~ 24804010 (-) |
G488645 | NA | non-coding | upstream | 122506 | 24837596 ~ 24839086 (-) |
G488646 | NA | non-coding | upstream | 124909 | 24839999 ~ 24842967 (-) |
G488386 | NA | other | downstream | 301965 | 24353533 ~ 24353823 (-) |
LOC110525552 | LOC106585495 | other | downstream | 938005 | 23713875 ~ 23717830 (-) |
LOC110525180 | hps4 | other | downstream | 1070234 | 23582127 ~ 23587892 (-) |
G487016 | NA | other | downstream | 1263726 | 23390017 ~ 23392062 (-) |
G487022 | bicdl1 | other | downstream | 1269881 | 23385534 ~ 23385907 (-) |
G489038 | NA | other | upstream | 391115 | 25106205 ~ 25106570 (-) |
G489511 | hmcn2 | other | upstream | 781873 | 25496963 ~ 25497489 (-) |
LOC110525606 | LOC106585545 | other | upstream | 1564617 | 26271759 ~ 26283169 (-) |
tmem230b | LOC106585554 | other | upstream | 1740642 | 26455731 ~ 26457883 (-) |
LOC110525619 | LOC106585557 | other | upstream | 1832132 | 26481087 ~ 26551627 (-) |
G488535 | NA | non-coding | downstream | 13689 | 24700369 ~ 24700758 (-) |
G488543 | NA | non-coding | downstream | 28161 | 24686086 ~ 24686286 (-) |
G488533 | NA | non-coding | downstream | 38860 | 24675321 ~ 24675587 (-) |
LOC110525585 | LOC106585524 | other | downstream | 5027 | 24655788 ~ 24715090 (-) |