LOC110525601 (LOC106585539)


Basic Information

Item Value
gene id LOC110525601
gene name LOC106585539
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 25643232 ~ 25660249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605858.2
gcagcctggattcgaacacAGAACCTCCCCGCTTTCTGCCACTGATGGGCATTGCCAGAGCGATGGGCAACTCCGTTGTCCATGATGATAGAGTAGTTGGGTCCCATGGCATGTCCTGTCAGAGTGGCgatggtaaacagctgaggagaCACCTCACCTACCgccttctctctcatctcacaAAACACGTCGACCATCACCATGCGTTCATCAGCATCTGTGTTTCCTATATGAACCCTGCGACTCGCACCGGACACCACCAACTACGTAGCAGCCCATAGCATCTCTCACTATTGAATACAAGCGgttgacgtcaacaaccctcatcgaatattcaaaaataattacaataatgCAAAGAAAGGATAGGCTGGAGCTTGACGGCCCGCGgtgccgctttgtggacaacgaTTCCGATTGCTAGGGCGGAGGGACATGCATCTTGCCATTATATCCACACTATTTGgtatctcgtcattatatacaaaTCTCTGCCCAGACAGAATCATTGGCAGGTCGGGCTCGAAACATAATACACTTCCGGTTGCATAAAAAAATTGCAGCTACCGACACAGCTGGAGTGGGGGAGGCCTTCCTCTAGTGAAAGCGAGCTACTGGGGGGAATGGGTGACGTTTGATCGGGAAAAGGTTGTCTACAAACTGGTAAGCCATATCCAAGAGATGGATGACGGCAGCGCCTACATAGAGTTTGATGTGCCAGAGTTCAGCAACACCGTCCTCAACCAGCTCAACGACTTGCGGCTGCAGGGGAAGCTATGTGACATTATCGTTCACATCCAGGGCCAACCGTTCCGGGCCCACAAGGCCGTGCTGGCGGCCAGCTCACCGTACTTCCGCGACCACTCAGCCCTGGGAACCATGAGCGGCCTGTCCATCTCCGTCATCAAGAACCCTGATGTGTTTGAGCAGCTGCTGGCCTTCTGCTACACTGGCCGCATGTCCCTGCAGCTCAAAGATGTCATCAGCTTCCTCACAGCAGCCAGCTTCTTGCAGATGCAGGCCGTCATTGACAAGTGCACCCAGATCCTGGAGGGAATCCACTCCAAGATCAGCAGCGCCACCAGCCCAGACGAGGGCTCCCAGGCCAGCCGCAACGGTGTTAAAGACAGCAGCCTCTTCATCAACCCCACACAGATCTCCCCCCCTTACTACTCCAGACACAGCATAGAGGCCCGCTCTGAGCTAGCAGCAGGGAAAGGCCATGGCAGGGCGCGGCACCAGGAGGAGGGCCAGTCAGACCGCGGCAGCAGTGACGGTGTGTCAGAGCAGGAGGCAGCcacggagggagagacagagcaggtGGAGCTGATTGGGAAGGACGGCCAGGTGACAGACGTGCATGTGAAGCTGGAAAAGACGGACCGGCCCAGCTACTCCGACAGCTCCTCGGCAGGCGACGATGGCTACCACACAGAGCTGGTGGATGGAGAGCAGGTGCTGGCTGTCAGTGTCGGCTCCTATGGTCCTGTCATCCAGGCAGCTGGCTACACTTACTCAGGCCTGTCATCTCCCTGCTTCGTGAGCCTCAGCAGCTCCAGCCCCTCCCGCTCCATGCTCAGTGGCTTCAGGGGAGGCCGGGCCAGAGCCAAGCGCCCCCCTGTAGCCGTCCCAGCAGAAGTCCTGAGTCAGATCAAACCAGGAAACGCAGAGGACAGCAGCGAAGCACTGTTGGGTCAAGCAGGCTTTGAGAATGACGTCCAGGAACGGAGCCTGCGCAGCCAGTGGTACCCCTACAATGAGAGGCTCCTCTGCATCTACTGCGGCAAGTCCTTCAATCAGAAGGGCAGCCTGGACCGCCACATGCGCCTGCACATGGGAATCACACCCTTCGTCTGCAAGTTCTGCGGCAAGAAGTACACGCGCAAAGACCAGCTGGAGTACCACATCCGCGGTCACACGGACAACAAGCCCTTCCACTGTCAGATCTGTGGCAAGTGCTTCCCTTTCCAGGGAACCCTCAACCAGCACTTGAGGAAGAAGCACTTGGGGGCCACAGAGGGCACCAATCACATGGACTCTCCAGAGAGAACGGAGGGGAGCTCTGGTCAGAAAGACCCAGAGGATGCCTCTGAGGGGATGGTCTTTGAGACGCAGTATGTTGAGGAGGCTCCGGCCACCGACATGGAGGAGAGCTCAAAGTGCAGCCCTGAGGAAGCCCAGGCATCCAGGTGTGATTTTTAGGCCCCTGTTCTGGTTGAGGAAGCtttaacatgttttttatttttttatttttttttatgtttaggATTTCTTTTGGAAGCGGCTCCTTCAAATGTTGAATCTACCTTGTACTTCCAGGTTTTCTGCCTGTCCATTTTAGTGAAAGTAGAAACATAGAAGAAGAAAAGGGTGCTTTTTAAAAATAGATTATTTCAAAAGGAAGGAGAATCAACTTGCTATTGATAAGGTGGCCTCAATAATCAAGGCCtccttgttgtttttgttttctctttAATCTTTCCATGTTTTTAAAACATATTTACAGAGTAATATAGGCATGTTGCAATAATTGATAATATGAAAGCTCTGCTGCTTGTCACAAGTTTTTACCTGATCTGTTTTTGCACATGTGGCCAAAGGTGGTCACTTTACTCACAAGGAATTATTTTTCTGCAAGTGCAAAGCTTCATGTGACATATCTGTTCAATACCTCATGATACAACTACATACTCATAACAGACAGTATTTTATGAAACTCCACCAGGTTCTACCTCATAGCTAAGAACCTAACAGGAACAGAAGTGTTTTccgtttaaaaaaacaaacagtttTGTTTTAGGGTCTATGTGTTATATTTGCCAAACTCTAAGAAGAACAATCCTCAGTCTCAACACAACGCCTTGATACTGTAGACTAATGTTCCTTGCTGGTTGTATGAACTCTGGACCTTGTCCATCAGTTCATGGTCAACAAGGATGTAATGTGGTCGAAGAAAGGATTtgctatatttaagcaataagacccGGGGAGGTGTGGTATAAGGTCCATATACCACGGTTAAGTGCTCTTCTTACGCACAACGCAACGCGGAGTATATTGGCCAAATACCATAAACCCTTGAGGTGCCTTGTTGCTATGATAAACTgcttaccaatgtaattagaacatttaaaacatattttaggggtcatacccatggtatatggtctgatataccatagcTTTCagcaaatcagcattcagggctcaaaccacccactTTATAATGGTGTATAAGAAATATTAAGTATGTTGTATGTTTGCATTGAGCAAGCTCAAGGACAGTGGATAGAGTACAATAGTAGaacacaatacattacattatttCCACTGTCTCTATAGCCAAGATCTAGTTTACTTTTCAGAACACACAGGAGCAGATTCCACTTATCTGTCTCTTTTTTTACCCAGTGAAGGTCACATGCAGTTGGCCGTGGTGTGTTTTACAGATGTGATTCTATCTATTAATCGACATGGGATCAATGATTGAGCCTGACACAGTGAAATCATTGGAGTGTCTTCCATTCTGATGGTGTTTAGTTAATTATTCTCAACCTGTTTATGTGAAACTGTTTTTTATCTGTGTGGAGATGATGCTCAGTGCAGAGTTCCCCTCATTAGCTTGGCACAGCAGGCGCAGCGCTGCCCTGGATCTGTGCATGGAATCAATATGCTCACAGTATGCAAACAGGGAGAAGGGAATATCCGCCATCTTGTCATGGCAGTTTTTGTTCACTCCATTTCATGAGAACTCTTGTTCTGCTCTTTTGTTTTAATTTACAGTTTCTGCCCTTTCCTGAGCAGACGCAACTGTTGAGATGAGGGGATAAAATGGGAAAGCGTGTAGTCTCATTGATGCTTCATTAGAAATTAAGAGTTTGATGGACAGAGGGTAGAGGGTTGTGAGATGAGGTTGTGAACCAAAGTAATGGTGCACTTTTTGTGAGTAAAATAGTGGCAGTTAAAGTTAAGAGCAGTGGTGACTGGTGACCATCAGTTTATTGTGACAAAAATAGGCTTTTTAATAGTCAATGATCAAATTATTACTGCATCAGTCAGTGTAAGTCCATTTGACAACAGATTGGTAGCTAGCTTTTTCAGTGTTAATTGGTAAATAATAATCAAAGGGCACTGCTGGCATCGGGGATGGTGCTCTGCTTGTTTAGAGATTAGCCGGGCTTTCAGGGCTCAGCAGTTGGATGAATGTCATTTGACCACATTTCACAACTTTTGTTAGAGATTCCATTTTTCATATCGTCATAAGTCACTAATGCACACTATGGTTGGGGTGGGAGGTAGGCTGTGTCAGATGTATATTGCATTACATGGCTAAGCATTGCAATGCACAATGCCATGGCATAGTTTAGGTGGCGAATGGGATTTCAATATTCTTATTGTGTGATAATGCTTCTAAGTGCAGTAGTTTTTAATAATATGGGCCTAAATTCATATAATTATTGCGCTAACGTCCTAGCCCAGATCAAGCTCTTTATTTGGTAGGTGCGGTTAAGATCAGGTGGAAAGCTGATCCTTAAAAAGCACTTTTTGTCAACAGTAATTTTGCTCCATTACCCCTCTGCTTGCTGACTTGCTATTTCAGCAGTGAGTTGCCATCCTTGTATCCTGTTATCTTTTAGTTTTTACACATGAACACACAAAACTATAATTTAGAGAGAAATGTCCCGAAAAGCCCAGAGGTCCAGGTGGGTGTGGACAAGAGAATTTCCTCTTCATTTAATGTAGCACCACCATTTACTATGCCTGTATGTTATTTTTCGGTTGTTTGCTGCATCTTTTTTTTATCACATTACCATCCCCTTGCCTTTGGCAGAACTTGGTTCTGTGATTTTGTTTTCATATTGGTATTGTGAAGTTTTGCATGTATTTCCATATTGTGTAATGTTAGGTCACCAATGCAGTCTTTTCTCCACTGAATGCTCACTACACATGTGGTTAGCTCATTGTTTCACCAGATACTGTTGGAAACTGTCCCGTTTACAACCAAAAGGACCCTTCTGTGATTCAGTGAGTTATCTGATTCACTGTCTCCATGTCTTGTTGCTGATCAGTGACAGGCCCTTccctttttgttttatttttgtatttctcCATCAACAGAACATATGCTTGACAGGGTTGTCCAAAGTCAGCCACAATCTATTTTCCTCTGTCTTGGATAAGTCTGGGATATTTATGTTATGCTCTGTGTGGTAATGCACTCTGCACATTTGCAGAACCATATCTGTAAAGTCTTAACCCTGCTCTTATTgaatctgtccctctgtccccctacTGATTTTAGAATGGGGAATCGACACTGAACAAAGTTATAAATGcaaccattttttattttactgagttactgtgcatataaggaaatcagtcaatttaaataaattcattaggccttaatctatgaatttcacatgactggtaatacagatatatgcatctgttggtcccagatacctttaaaaaaaagggggggggggtagggacgtggatcagaaCCAATCcgtgtctggtgtgaccaccgtttTGCCTTGTGTAGTGTGACAAATATCCttagcatagagttgatcaggctgttgattgtagcaTGTGGAATTTTTTTCCCAATCTTCTTcagtggctgtgcgaagttgctggtaattgtcgggaactggaacacgctgtcgtacacgtcgatccagagtatcccaaacatgctcaatggttgacatgtctggtgaggtaatggaaaaactgggacattttcagcttctaagAATTATGTACAGCACCACAATGGGCCTCAGTATTTAAGCatgttatctctgtgcattcaaattgccattgataaaatgcaattgtgtttgttgtccttaGCTTGTCTGCCAataccccacccccaccctggtacactctgttcacaacgttgatatcagcaaaccgctGGCCCGCACGACACCATGCACGCGGTCTGcaatctgcccggtacagttgaaaccgggattcatccgcgAAGAGCACACTACTCCAGCGTGCCAATGGTCATCGAAGttaagcatttgcccactgaagtcgtttacgacgctgaactgcagtcaggtcaagaccctggtgaggaccaCAAGTACGTacatgagcttccctgagacagtttctgcagaaatgtttcgCTTTTGCacacccacagtttcatcagctatccTGGTGGCTGGACTCaggcgatcccgcaggtgaagatgccggctgtagatgtcctgggctggcgtggttacatgtggtctgtggttgtgaggccggttggatgtactaccaaattctctaaaaggatggaggcggcttatgatagagaaTTAACATTGAATTCTCTGACAACGGCTctaatggacattcctgcagtcagtatgccagtTGCACGGTCCATCAACTTGAgacgtggcattgtgttgtgacacagCTCTACATtttagtggctttttattgttcacagcacaaggtgcacctgtgtaatgatcatgctgtttaatcagctttttgatatgccacacctgtcaggtggatggattatcttggcaaaggagaaatgctcaccaacagggatgtaaacaaatttgtgcacattttgttttttgaaaaaagctttttgtgcttatggggtcttttatttcagctcatggagcatgggaccaacactttacatgttgcatttatatttttgttcagtgtactttaCCATGTAAAAATATGGTCCTTTTAATAGGTTATTGAGCCAGGAGTCAAATCAAAGATTTCCCAGTAGATAATTCTCCAAAGGTATACATTTGGCCCGACAAGAGGCATGATGAGTTTTCTAgataatacttttttttcttccaatTCCAGATGATCTTGTTACAACACAATGCAGTTGAATCCCACATAGGATGTTGCCAGATATGATAGTCATATCATGAAAGAAATGTATGAAGCCATAAGTACTAAAGTTGAGATTGTTTGTTTCATTGTCATTTTAAGATGCCAACCATACAAATCCTAGAAATATTTTAAAGAAAAATAAGCTTTTGAATCTTGATCTGTGCCTTGCCATACAAACGATCCCTGTGGATATAAAGCATCTGACACTTACAGTAGACATTTGTTTTGTTCCTGCCTTCAATGGAAAGAATAAAAGGATTGAGGACAAAGTATTGATAAAGTACTGTTGATTTTCTTCACTTTTAatttggatttaaaaaataaatggtaaTAGTTTATGCAAAAGTGAAATGTCTACAAGGGAATAGGCACGGAGAATCATGTCTGAGATACATGCCCATGTTGCGCCCTTAAGTTAGCAGGGTAATGGGCACCTCGTTTTTAGTCAGCCATACCATTTCCTTGTCATCAGACCCTTTTTGATACTTGTATTCATTTGATTATGTGATGGATTGTGTTTTATTATATTGTGACTTGCATGGCATCTAATCGCAGTCATGAGCTGTTCTGTTCGTCTCTCCAGAGGCTGTTttgtatgtatactgtatccttTCTGTTAGCACTGAGGACAATCTAAGATCTCCTTCAGTCTCAGAGAAGGGAGAGTATAGCTAGACTCTTCCCTCTCAAGATTAATTTAGTTACATCTGGCCAGGGGGACAGCTTGTTGAGAATGAGCaggtttaaaaca

Function

NR:

description
zinc finger and BTB domain-containing protein 34-like

GO: NA

KEGG:

id description
K10508 ZBTB34; zinc finger and BTB domain-containing protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605858.2 True 7654 mRNA 0.45 2 25643232 25660249

Neighbor

gene id symbol gene type direction distance location
LOC110525597 NA coding downstream 192020 25449019 ~ 25451212 (-)
LOC110525591 LOC106579906 coding downstream 267750 25172861 ~ 25375482 (-)
LOC110525589 LOC106585529 coding downstream 725380 24911627 ~ 24917852 (-)
piwil1 piwil1 coding downstream 758227 24873223 ~ 24885005 (-)
LOC110525585 LOC106585524 coding downstream 928142 24655788 ~ 24715090 (-)
lmx1bb LOC106585540 coding upstream 43925 25704174 ~ 25768796 (-)
pbx3b LOC106585542 coding upstream 318705 25978954 ~ 26067633 (-)
LOC110525604 LOC106585543 coding upstream 574303 26234552 ~ 26264035 (-)
LOC110525606 LOC106585545 coding upstream 611510 26271759 ~ 26283169 (-)
LOC110525607 LOC106585546 coding upstream 633439 26293688 ~ 26317316 (-)
G489622 NA non-coding downstream 57 25641539 ~ 25643175 (-)
G489590 LOC106585538 non-coding downstream 35753 25596797 ~ 25607479 (-)
G489527 NA non-coding downstream 123319 25519709 ~ 25519913 (-)
G489524 hmcn2 non-coding downstream 125576 25517411 ~ 25517656 (-)
G489520 NA non-coding downstream 131844 25511169 ~ 25511388 (-)
G489630 NA non-coding upstream 2892 25663141 ~ 25663812 (-)
G489646 NA non-coding upstream 24203 25684452 ~ 25684684 (-)
G489706 NA non-coding upstream 110888 25771137 ~ 25771355 (-)
G489721 LOC106569888 non-coding upstream 125350 25785599 ~ 25785942 (-)
G489731 NA non-coding upstream 135575 25795824 ~ 25796123 (-)
G489511 hmcn2 other downstream 145743 25496963 ~ 25497489 (-)
G489038 NA other downstream 536662 25106205 ~ 25106570 (-)
G488386 NA other downstream 1289409 24353533 ~ 24353823 (-)
LOC110525552 LOC106585495 other downstream 1925449 23713875 ~ 23717830 (-)
tmem230b LOC106585554 other upstream 795483 26455731 ~ 26457883 (-)
LOC110525619 LOC106585557 other upstream 886973 26481087 ~ 26551627 (-)
G491291 NA other upstream 1164618 26824867 ~ 26867158 (-)
G491539 NA other upstream 1556358 27216607 ~ 27244193 (-)

Expression


Co-expression Network