dpysl2a (LOC106585556)


Basic Information

Item Value
gene id dpysl2a
gene name LOC106585556
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 26502944 ~ 26530832 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605900.2
AGCCTCCAGACTTGGCCTGCAGCAGGTGAGTGGAGAGGCAGGGTGGGGCATTGCGCATGCACGGTGACCGTGGCCCTCATCACCGTTTATCTTATCGCTTGGTGACTGCTGGACAGGCTTGGCGCAGCATTGGAACGTGAGGAAAGCCTGTCAGACCTTTTAAATTCATTCAGCAAGCCTAGTTGGAACGGATTGAGCTATTTCACGAATTTAGTCAGGCGATAGCCGGAGACACAATTTTGTCTGGGCGTCGACTGGTCTCAACGCATCTGAGCATCCATCCCTTTCATTGCTAGCGGTCTAGCTAACATCAGTGAGTTGACAGACATAATCGAGGACGCTGACAACGCGCCGCTAAGATGTCCGGATACCAGGGAAAGAAAAATATACCTCGCATTACAAGTGATCGTCTCCTTATCAAATGTGGAAAGATTGTAAATGATGACCAGTCTTTCCTTGCTGACATCTATATCGAGGATGGAGTCATCAAGCAAATTGGAGAGAACTTGATAGTTCCTGGTGGGGTGAAGATCATTGATGCCCATGGACGCATGGTGATGCCCGGGGGCATAGATGTGCACACACGCTTCCAGATGCCAGACAGGGGCATGTTGTCAGCAGATGACTTCTACCAGGGCACCCGTGCTGCTTTGGCTGGGGGAACCACTATGATAGttgaTCATGTGGTTCCAGAACCTGGTGTGAGCCTGGTGGCAGCGTTCAACCAGTGGAGGGAATGGGCCGACAGCAAGTCCTGCTGTGACTACTCCCTGCATGTGGACATCACTAACTGGCACAAGGGCAtgcaggaggagatggagagccTGGTGAAGGACCACGGTGTCAACTCTTTCCTGGTCTATTTGGCTTATAAGGATGTTTTCCAACTTTCCGACTCCCAGATGTACGAGGTGTTCAATGTCATCAGAAACTTGGGAGCAATTGCTCAGGTGCACGCAGAGAACGGGGACATCATTGCCGAGGAGCAGCGTAAGATCCTGGAGCTGGGCATCACTGGCCCTGAGGGTCACGTGCTGAGCCGCCCGGAGGAGGTGGAGGCAGAAGCAGTCAACCGGTCAGTCACTGTGGCCAATCAGACCAACTGCCCCCTCTACATCACCAAGGTGATGAGCAAGAGTGCTGCTGATGTCATCGCCCTGGCCAGGAAAAAGGGTGCTGTGGTGTATGGAGAGCCTATCTCTGCCAGCCTGGGCACGGACGGAACCCACTACTGGAGTAAGAACTGGGCCAAGGCAGCTGCCTTCGTCACCTCCCCACCCCTCAGCCCTGACCCCACCACCCCTGATTATCTCAACTCACTGCTCTCCTGTGGTGACCTGCAGGTGACTGGTAGTGCTCATTGCACATTCCACACCTCTCAGCGTGCTGTGGGCAAAGACAACTTCACCCTCATCCCAGAAGGCACCAACGGCACTGAGGAGAGACTCTCCCTCATCTGGGACAAGTGTGTGGTGACTGGAAAAATGGACGAGAACCAGTTTGTGGCTGTGACCAGCACCAACGCAGCTAAGATCTTCAACCTGTACCCCCGAAAGGGCCGCATTGCAGTGGGCTCTGACGCCGACCTGGTCCTCTGGGACCCAGACGTCAGCAAGATCATCTCTGCCAAGAGTCACAACCTGGCTGTGGAGTATAATATCTTCGAAGGCACCGAGGTGCGTGGAGCTCCCCTGGTGGTGGTCAGCCAGGGCAAAATAGTGTTGGAAGAGGGCAACCTCCATACCACTGAGGGCTGTGGGCGCTATGTGAGCCGTAAGCCCTTCCCTGACCATGTCTACAGGAGGATAAAGGCTCGCAGCAGGCTGACGGAGCTGAGTGGGGTCCCCAGGGGTCTCTATGACGGGCCAGTGTGTGAGAATGTGACACCTAAGGTCATGACCCCGGTCACCTCGGTGAAGACCTCTCCAACCaagctgcagcagcagcagcaacagcagcagcaggctccCCAGCCCGTCCGTAACCTGCACCAGTCTGGCTTCAGCTTGTCTGGTGCACAAGTTGATGATAACATTCCCCGCCGCAACACCCAGCGCATTGCGGCGCCCCCTGGTGGTAGGTCCAACATCACCAGCCTGGGTTAAGCTCTACTGTCAGCTGAGCTAGGGAGGAGAGAAGCGGAGCAGTAGGATCCACCTCAGCTCCTAGACCAACCATCACAACCAACAAAGCTTCATCTATTGTGGTCCCGTCTCCCTGACTTAACTGCAAGCTGGTGGTCAAAAACACTCCATCCATCTTCATCCATACTTAACCGCTCTGCCACCTCAttcaaagaaaaaaaagaaatagcactcaatgttttgttttgtattaCCTACGCAATATgcaatcttttcatttttttaaaggaAGAGTCAAGTGAATTTAGAGAGTTCTTGATGTTTttctgtatatacactgagtgtacaaaacattaggaacaccttcctaatattgagttgcacccccttttgccctcagaacaacctctATTTgttgggacatggactctacaaggtgtcaaaagcgttccacagggatgctggcccatgttgactccaatgcttcccacagttgtgtcaagttggattgatgtccattgggtggtggaccattcttgatacacacaggaaactgttgagcatgaaaaagtacacctggcacttactaccatacccagttcaaaggcacttttgtATTGCCCATTCACTCCATTAACAgcaaacatacacaatccatgtctcaattgtctcaagacttagaaatccttctttaacctggctcctcaccttcatctacactaattgaagtggatttaacaagtcacatcaataagggatcatagctttcaccttgccagtctgtcatggaaagagcaggtgttcctaatgtattgttaactcatatatatacacacacacaatttaagtTTAGTCTTTGATTACATTTGGGCTTTTAATTGTACAAGAGGAGCTGTGGATTGTGTTCTTGTGGCATTTGATgtatctacactcttagaaaaaaggttttCAAAAGGGTTCTGTGGTTGTCCtcattggagaaccctttttggttccatttagaaccatCTTTCTAGAAccgaaagggttctacttggagcCAAAAAGAGGTATCCTATAGGAACAGCCAAATAACACTTTTAGGTCCTTTTTTTAAATATCGTACTGTATAAGGGCATTCTTGGTTTGACACCAGACAAGAAGAATCACTTCTGATTCCAAGAAGTGAGCCATTGCATTAGATCACTGTCAAAGACACATGGCGTATTTAACTATAGTACATTGGTTATTGTTTTTCTTCCATCATATAAGTACATGGAAGGTTTCAcaaatgtttttacattttcGAGGCTGTAAAATAGTGTTGTTGAAGGAACTCGGATTACGTTTTTACCTCACTAAGTCAGTTTGCAGTATTTGTATGATTTTAAAACAGCTGTGAGTTCTAGTTATTGTCCTTCCATAGCCTGTCTTTCTGGTCAGTATTACAACAGAACTTTCAGCTGAACAAATTCAATTATATCTTCCTTTGTCTCATTGCTGCACTTTTTGTATTGTTGTGATGTTTTTGTTGTTAATATTATACATTTTTGATCGTGTCTAGAGCTAAAACATTACTGTAATCTGAAATATTGACTCTTAGATCTTAGCTTGTCTGCTGATGGAATGTGCAGAAGTCAAGGGAGATGGATAAACCATTCATCTCCTCACTCCCCTCAGTCTGAACACCTTTGACACAAAGCATGCACAATACATGGCAGCAGGGAGaaccttcacccccccccccccaaaaaaaactgcTTCTTTTTCCTCCATTTTCTTCTCTCTTTTCACGAGCTGTCTGAAGTTAAAGGTCGCCGAGACACCAGGCTTCCTATAATCACACTGCTGTTTATTTTCTTATGACACTGACAGCCATGCTCGATAGAAGGTTGCCCCTAACAACCTCTCTGCACCAGGTGCTATTTGATCAATGCTGTGTATGTGCAGATGGTGGTGCCTACTTTTTCCACTCAACCACAGCAATTCAAGCTTTGTGAAACTACTTTACGGGGGAGCGGAGTCAGCTATTACATGACACGGGTCTTCGTTTTCTATCTGCTAAAGTGCAAAAAGTGAATCTGTGGAAATGCAatgttgatttgtatttgatatgtttgtttttgttgttttttcagaATGTTTGTTCAATATCACTTGCCTGCCTATTCTATAAAGTATTGATTGATAGTATGCTTTAAGAACCATGTATTTATGAAAAACACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAACCTCTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTAAAAATACCTGTTAACCTCTGTCAGTGACCAAGCTAGTACAAATACCTGTTAAGCACTGTCAGTGACCAAGCTAGTACAAATACCTGTTAACCTCTGTCAGTGACCAAGCTAGTA

Function

NR:

description
dihydropyrimidinase-related protein 2-like

GO: NA

KEGG:

id description
K07528 DPYSL2, CRMP2; dihydropyrimidinase-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605900.2 True 5193 mRNA 0.46 14 26502944 26530832

Neighbor

gene id symbol gene type direction distance location
tmem230b LOC106585554 coding downstream 45061 26455731 ~ 26457883 (-)
igsf9b LOC106585552 coding downstream 47524 26404186 ~ 26455420 (-)
LOC110525611 LOC106585549 coding downstream 111653 26382960 ~ 26391291 (-)
LOC110525608 NA coding downstream 168111 26330079 ~ 26334833 (-)
LOC110525607 LOC106585546 coding downstream 185628 26293688 ~ 26317316 (-)
LOC110525619 LOC106585557 coding upstream 4196 26481087 ~ 26551627 (-)
LOC110525620 LOC106585558 coding upstream 22706 26553538 ~ 26564330 (-)
LOC110525621 LOC106585565 coding upstream 111429 26608848 ~ 26711398 (-)
LOC110525622 NA coding upstream 182624 26713456 ~ 26724026 (-)
LOC110525623 cenpe coding upstream 195420 26726252 ~ 26732944 (-)
G490621 NA non-coding downstream 34613 26467521 ~ 26468331 (-)
G490616 NA non-coding downstream 36665 26466002 ~ 26466279 (-)
G490517 NA non-coding downstream 112799 26389780 ~ 26390145 (-)
G490513 LOC106585548 non-coding downstream 132566 26369257 ~ 26370378 (-)
G490511 NA non-coding downstream 137499 26365205 ~ 26365445 (-)
G490886 NA non-coding upstream 12658 26543490 ~ 26544586 (-)
G490963 NA non-coding upstream 176270 26707102 ~ 26729484 (-)
G490978 NA non-coding upstream 215410 26746242 ~ 26750563 (-)
G490982 NA non-coding upstream 224948 26755780 ~ 26818625 (-)
LOC110525606 LOC106585545 other downstream 219775 26271759 ~ 26283169 (-)
G489511 hmcn2 other downstream 1005455 25496963 ~ 25497489 (-)
G489038 NA other downstream 1396374 25106205 ~ 25106570 (-)
LOC110525585 LOC106585524 other downstream 1793524 24655788 ~ 24715090 (-)
G491291 NA other upstream 294035 26824867 ~ 26867158 (-)
G491539 NA other upstream 685775 27216607 ~ 27244193 (-)
LOC110525653 NA other upstream 1204164 27734995 ~ 27737024 (-)
LOC110525655 LOC106585601 other upstream 1296399 27827231 ~ 27885634 (-)

Expression


Co-expression Network