LOC110525623 (cenpe)


Basic Information

Item Value
gene id LOC110525623
gene name cenpe
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 26726252 ~ 26732944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473788.2
caggccttattcctaaaataaaatctcaatttcagcttcaatttttttgtaagttgttgaatatgcaatttaaaagagaggccgtcatcaattaaaatccCAATATATTTATGAGGtaacaacctcaatctccttgccatTTTATCTCCAAACGAGTTGAACAAATTGTCTGAGAAGGTGTCCCGTCTGGAGATCCAGCTGTAAAATGAGGCTCGGCAGAAGCAGGAGGCCATGGAGAAAGTGGAGACTTTCGAGAGGAGGGTTGCCGAACTGGAGATGCAGTTAGAGAAGTTGCAAATGCCCACTGATGCACAGCTGGAAAACGAAGTTCAGCAGAACCAGGAGGCCATGGAGAAAGGGGTGGTTTTTGAGAGCAGGGTTGCTGAACTAGAGAAGCGGATAGAAGAAAAGTCACAAATGCCTGCTGATGCGCAGGAGGCCATGGTGAAGGTGGTGACTTTTGAGAGGAGGGTTGCTGAACTGCAGAAGATGCTAGATTTCCACTGACTCACAGGAGCAGGTTGGCTATCACCAATGCCTTCTCACTGGTTTATCGTGCAGAATGTCAGAAATCATTTAATCTAAATGCAAAAATGGTCCAACTGTCATTCTTTACAGATGAAAAGGGGATTTGAGGAGACAATTCAACTCTGAGACGTTGGTGTCTGAGAAGGAAATGGCTGCTGCTGAGTGTGATTATCTCAAGCAGGAGCTCAACATTCTAATGGGATGGACTAAAAACTTGAAGAAAAGGCTGCACTTCTtcaggagatggaggagaagaaagagatggATGAGTTCAATTTTCTGGAAGAGGAGAGCAAAAGAGAACGAGAAAGAACTACTGAATGAAATGTCCTTAAAGAAGGCTGTGGAGGCATCTAGATGCAAATCTCAAGAGCTTGAGGCTAATCTGGTGGCAATGTCAGAGGAGCTGAAAAAGAAAGATGACTGGGCAGAGGAACTACAAAGATCGAGTGACATTGACTTGGTCCAACAAATGAAGCAGCTGCGACGCACTCTGGACGATGCTGAGGGACTGAGCTGTGACACTAAGAAGGAGTGGGCCCACCTGCGCAGTGAAAATATCTCACTCAAAGAGAGGGATGTGTCTTCAACCTCAGTGTCAGTTTGCAGCCTGTATTTAAATGCAAACTGCGCTCAATGGATTGACCATTATCGTGTTGCATTAGCTTTAACTCTATGCCTTGGCCTAGCTTTCATGTCACACTAACTGCTGGCTATGAGAGGATGGAAGCTGAGGGGAATGGCCTTAGCTATCAGTTGGAGACAGAAAAATCACGCTTCAAAAAGATGCAGGTTGACCTTCAGAGGGAGTTACAGGGAGCCTTTGAGGAGAACACCAAGCTTACTACTCTCCTGGATGGAAAAGCTCCGAAAAATCTCATAGACAGCATTGAACTTGAGAAAAAAAGTTACTGACCTGAAGAAAGAGCTGGAGAAGTCTCATGAAGATGAGAAAACCCTACAAGCTAAGATCAAGGATTTGAGTCCACTGCAGGATCTTCCAGATaaagtggacagtttgatgaaGCAGGTATATGTCCTCAATGAGGAGTTGTGTGCAGTCCAAATAGCGAGGGAGAGCCTGGGTGTCTGCTAAGGAGGAAGCTCAGCAACTCAGAACATTTCCAGAGCTCCCAGGAGCAGCAAGTCAAACTGCTAGATGACCTGAGTGAAGCAAAGTTGAGGGAAAACGACCTAACCCATCAGTAAATCGACATCACTGAACAACTGGAGACTCTCCGTAAGGACTTGGTGTGCTCGTCTGTGGAGAACAGTCAGCTTCTTACTACTGTGGAAGAGTCCAGCCTGAAAATAAGGCAACTGTGAGGAGCTTGAGTCTGCGATCTGAGTGAGATAATCTCCTGTCTGAGAAGACAGACAGTCCTCAGAATCATGCAGAGGAGTTGGTGCTCTCTACTGTGACCTccctgactgaagagagagaccagctccaGGAGATACTGggtggagtcagagaggagaggaaccagCTGAAGAGAGACCTGGAGGAGAATGTGGAGATGGTCCAGGCAGAGCTAAAACGGCAACATCTGAACTCAGAACAGCAGACGTGGCCAACAAGATGATCAACTTCAGCAACAAGTCAGTGCCAGTGTCTTTTATACGAGAAGCAGCTGAGTGAGGAGCTTGAGTCTGTGTGAGCTGAGCGAGAGTGTCTTCTGTCTGAGAATACAGACAGCCCTCAGAATCATGCAGAGGAGTTGGAGAAGCTGCTCTCTACTGTGACCTCactaactgaagagagagaccaggtCCTGGAGATACTGGGggaagtcagagaggagaggaaccagCTCAAGAGAGACTTGGAGGAGAATGTAGAAATGAACATCAAGAAGCTCAACTTCAGCAACAAaTACAGCAGCTAGGAGAGGAACAGGAAACCATGACAGAGGAGAGGCGTCAGTTGAAGGGTGACCTGCAGGAAAAATATGGAGATGGCTGAAGAAACCCAGGGACTTCCCTTGGATGGAATGGAGGAGCTCTGACAACAGAGCCAACTGAACTCTGACCTTGAGAGGCAAAGTTTACAGAAGGAGTCTATTCTAGAACTGCAGCTAAGCAGCTGAGAGAGGAGGTTGAATCATTGCAAGCTGAGAGAGAGCATCTCCTGTCTGAGAAGACCGATAGCCCTCAGAATCATACAAATTAGTTGGAGAAGCTGCTCTCCACTGTGACCTCactgactgaagagagagaccagctccaGGAGATGCTGGGGGGagtcacagaggagagaaaccAGCTCAAGAGGGACCCTGAGTAGAATGTGGAGATGATTATTTGAAAACCAGGAGGAGCTGATTCACCATCAAGAGGAAAATATTAAACATATGGATACTGCACATCTGTTACATCTAGTTGAACTGCAAAGTCAGaagtcaacaaatgagagcgcctgggttaacctctacatcacccaaggaacagagaaggagtaggatgagggtatcCGGCAAAAGGGAAGAACAGCCGAGAGCTGCCAGTGGCACGAGCGTACCagacaaggccgcggggccagatggattaccagaacGTGTAGTACAAGCATGCGttaac

Function

symbol description
cenpe Predicted to enable microtubule binding activity and plus-end-directed microtubule motor activity. Predicted to be involved in microtubule-based movement and mitotic cell cycle. Predicted to be active in microtubule. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly 13. Orthologous to human CENPE (centromere protein E).

NR:

description
PREDICTED: centromere-associated protein E isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473788.2 True 3108 mRNA 0.47 16 26726252 26732944

Neighbor

gene id symbol gene type direction distance location
LOC110525622 NA coding downstream 2226 26713456 ~ 26724026 (-)
LOC110525621 LOC106585565 coding downstream 14854 26608848 ~ 26711398 (-)
LOC110525620 LOC106585558 coding downstream 161922 26553538 ~ 26564330 (-)
LOC110525619 LOC106585557 coding downstream 176846 26481087 ~ 26551627 (-)
dpysl2a LOC106585556 coding downstream 195420 26502944 ~ 26530832 (-)
LOC110525624 LOC100380864 coding upstream 5335 26738279 ~ 26740643 (-)
LOC110525627 LOC106585561 coding upstream 95214 26828158 ~ 26876043 (-)
LOC118965120 NA coding upstream 144378 26877322 ~ 26877454 (-)
LOC110525629 LOC106585566 coding upstream 150919 26883863 ~ 26888305 (-)
LOC110525021 nkx31 coding upstream 518114 27251058 ~ 27252377 (-)
G490886 NA non-coding downstream 181666 26543490 ~ 26544586 (-)
G490621 NA non-coding downstream 257921 26467521 ~ 26468331 (-)
G490616 NA non-coding downstream 259973 26466002 ~ 26466279 (-)
G490978 NA non-coding upstream 13298 26746242 ~ 26750563 (-)
G490982 NA non-coding upstream 22836 26755780 ~ 26818625 (-)
G491027 NA non-coding upstream 89949 26822893 ~ 26823157 (-)
G491417 LOC106585572 non-coding upstream 306100 27039044 ~ 27039874 (-)
G491475 LOC106585563 non-coding upstream 376430 27109374 ~ 27110138 (-)
tmem230b LOC106585554 other downstream 268411 26455731 ~ 26457883 (-)
LOC110525606 LOC106585545 other downstream 443083 26271759 ~ 26283169 (-)
G489511 hmcn2 other downstream 1228763 25496963 ~ 25497489 (-)
G489038 NA other downstream 1619682 25106205 ~ 25106570 (-)
G491291 NA other upstream 91923 26824867 ~ 26867158 (-)
G491539 NA other upstream 483663 27216607 ~ 27244193 (-)
LOC110525653 NA other upstream 1002052 27734995 ~ 27737024 (-)
LOC110525655 LOC106585601 other upstream 1094287 27827231 ~ 27885634 (-)
G494389 LOC106585296 other upstream 2678271 29411215 ~ 29415314 (-)

Expression


Co-expression Network