Item | Value |
---|---|
gene id | LOC110525644 |
gene name | LOC106585592 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 27561557 ~ 27578521 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
cGMP-dependent protein kinase 1-like isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021605960.2 | False | 2553 | mRNA | 0.44 | 9 | 27561557 | 27569913 |
XM_021605956.2 | False | 2812 | mRNA | 0.46 | 20 | 27561557 | 27578513 |
XM_021605957.2 | False | 2808 | mRNA | 0.46 | 20 | 27561557 | 27578513 |
XM_021605959.2 | False | 2698 | mRNA | 0.47 | 19 | 27561557 | 27578513 |
XM_036979755.1 | False | 2817 | mRNA | 0.46 | 20 | 27561557 | 27578513 |
XM_021605958.2 | False | 2434 | mRNA | 0.49 | 20 | 27562428 | 27578515 |
XR_002473789.2 | True | 2345 | mRNA | 0.49 | 18 | 27565809 | 27578521 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110525643 | LOC106585590 | coding | downstream | 1001 | 27545608 ~ 27560556 (-) |
LOC110525639 | LOC106579858 | coding | downstream | 209666 | 27342945 ~ 27351891 (-) |
LOC110525638 | LOC106585585 | coding | downstream | 283006 | 27270821 ~ 27278551 (-) |
LOC110525021 | nkx31 | coding | downstream | 309180 | 27251058 ~ 27252377 (-) |
LOC110525629 | LOC106585566 | coding | downstream | 673252 | 26883863 ~ 26888305 (-) |
LOC110525648 | LOC106585594 | coding | upstream | 74264 | 27652785 ~ 27705710 (-) |
LOC110525649 | LOC106585595 | coding | upstream | 135610 | 27714131 ~ 27724003 (-) |
LOC110525653 | NA | coding | upstream | 156474 | 27734995 ~ 27737024 (-) |
LOC110525654 | LOC106585600 | coding | upstream | 219749 | 27798270 ~ 27812882 (-) |
LOC118965072 | LOC106579843 | coding | upstream | 239055 | 27817576 ~ 27820202 (-) |
G492067 | NA | non-coding | downstream | 54797 | 27496177 ~ 27506760 (-) |
G491603 | NA | non-coding | downstream | 240919 | 27320408 ~ 27320638 (-) |
G491602 | NA | non-coding | downstream | 241196 | 27320129 ~ 27320361 (-) |
G491598 | NA | non-coding | downstream | 244457 | 27316878 ~ 27317100 (-) |
G491497 | NA | non-coding | downstream | 369199 | 27153706 ~ 27192358 (-) |
G492122 | NA | non-coding | upstream | 22824 | 27601345 ~ 27601642 (-) |
G492127 | NA | non-coding | upstream | 28164 | 27606685 ~ 27607004 (-) |
G492145 | NA | non-coding | upstream | 48759 | 27627280 ~ 27627646 (-) |
G492146 | LOC106585319 | non-coding | upstream | 49370 | 27627891 ~ 27628877 (-) |
G492157 | NA | non-coding | upstream | 66554 | 27645075 ~ 27645708 (-) |
G491539 | NA | other | downstream | 317364 | 27216607 ~ 27244193 (-) |
G491291 | NA | other | downstream | 694399 | 26824867 ~ 26867158 (-) |
LOC110525619 | LOC106585557 | other | downstream | 1009930 | 26481087 ~ 26551627 (-) |
tmem230b | LOC106585554 | other | downstream | 1103716 | 26455731 ~ 26457883 (-) |
LOC110525606 | LOC106585545 | other | downstream | 1278388 | 26271759 ~ 26283169 (-) |
LOC110525655 | LOC106585601 | other | upstream | 248710 | 27827231 ~ 27885634 (-) |
G494389 | LOC106585296 | other | upstream | 1832694 | 29411215 ~ 29415314 (-) |
LOC110525681 | hectd4 | other | upstream | 1900134 | 29411204 ~ 29483533 (-) |
LOC110525684 | LOC106585295 | other | upstream | 1923732 | 29502192 ~ 29520980 (-) |