Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110525653 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 27734995 ~ 27737024 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002473790.2 | False | 631 | mRNA | 0.41 | 4 | 27734995 | 27737024 |
| TU559251 | True | 584 | TUCP | 0.42 | 4 | 27734996 | 27736978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525649 | LOC106585595 | coding | downstream | 10992 | 27714131 ~ 27724003 (-) |
| LOC110525648 | LOC106585594 | coding | downstream | 29285 | 27652785 ~ 27705710 (-) |
| LOC110525644 | LOC106585592 | coding | downstream | 156474 | 27561557 ~ 27578521 (-) |
| LOC110525643 | LOC106585590 | coding | downstream | 174439 | 27545608 ~ 27560556 (-) |
| LOC110525639 | LOC106579858 | coding | downstream | 383104 | 27342945 ~ 27351891 (-) |
| LOC110525654 | LOC106585600 | coding | upstream | 61246 | 27798270 ~ 27812882 (-) |
| LOC118965072 | LOC106579843 | coding | upstream | 80552 | 27817576 ~ 27820202 (-) |
| LOC110525655 | LOC106585601 | coding | upstream | 95228 | 27827231 ~ 27885634 (-) |
| LOC110525658 | LOC100195761 | coding | upstream | 291152 | 28028176 ~ 28044300 (-) |
| LOC110525659 | LOC106585607 | coding | upstream | 307781 | 28044805 ~ 28105169 (-) |
| G492195 | NA | non-coding | downstream | 5704 | 27729057 ~ 27729291 (-) |
| G492192 | NA | non-coding | downstream | 7803 | 27726821 ~ 27727192 (-) |
| G492134 | NA | non-coding | downstream | 21629 | 27713091 ~ 27713366 (-) |
| G492188 | NA | non-coding | downstream | 22386 | 27712370 ~ 27712609 (-) |
| G492157 | NA | non-coding | downstream | 89287 | 27645075 ~ 27645708 (-) |
| G492229 | NA | non-coding | upstream | 33574 | 27770598 ~ 27770807 (-) |
| G492235 | NA | non-coding | upstream | 38574 | 27775598 ~ 27775805 (-) |
| G492207 | NA | non-coding | upstream | 39532 | 27776556 ~ 27776947 (-) |
| G492208 | NA | non-coding | upstream | 54851 | 27791875 ~ 27793746 (-) |
| G491539 | NA | other | downstream | 490802 | 27216607 ~ 27244193 (-) |
| G491291 | NA | other | downstream | 867837 | 26824867 ~ 26867158 (-) |
| LOC110525619 | LOC106585557 | other | downstream | 1183368 | 26481087 ~ 26551627 (-) |
| tmem230b | LOC106585554 | other | downstream | 1277154 | 26455731 ~ 26457883 (-) |
| LOC110525606 | LOC106585545 | other | downstream | 1451826 | 26271759 ~ 26283169 (-) |
| G494389 | LOC106585296 | other | upstream | 1674191 | 29411215 ~ 29415314 (-) |
| LOC110525681 | hectd4 | other | upstream | 1741631 | 29411204 ~ 29483533 (-) |
| LOC110525684 | LOC106585295 | other | upstream | 1765229 | 29502192 ~ 29520980 (-) |
| G494542 | NA | other | upstream | 1938299 | 29675323 ~ 29675573 (-) |
