LOC110525659 (LOC106585607)


Basic Information

Item Value
gene id LOC110525659
gene name LOC106585607
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 28044805 ~ 28105169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605987.2
CAAAAGAATTGAGAGCAGACAAGTTAAACTTGCAAAGTAGAATCTGCGCTAGGACCCCGCGTATCAGCGCGAGCAGGCGACGGAATGCGCGCACTGGGGTAGTAACTGAATTTCAGTGGGACAGAGTGGCTAGCAAAACCGCTAGATTTTGTGAATACAGAGTATCCGATCAGGACCAGTTCAACCGTCTTCCAAATTAACTCAGTTACTTTCAGACAAAGTTTAATTTAAGTTGACACCCGGAGATATCTTCAGAACATCGTGCCAAACGTATTTCTAAATCTATGAATAAACTTAAACGGTGGAGGGCATCAGATCTTATTCAATTCAGTATGGAATTTGATTAAAACCACTGAAGTTTGGATATAGGTGGTTTGGACAGATAATGGTAACCAAATTCTATTTGTGACAATCAAATCCAGTGTTGACGCGTCGAAGTGTGTATCAAGGAGATACAAAGTGACGGAAATTGGACAAATACTTAATCTTCATCTCGAATCTTTACATTTCAAGTAGAGTTTTAGTTCAGGACAACTGAACGGGGTGAGCTTTACTGGTATTTTCTTATAGATGAAAGCCACATAGGACTATGTGCGCACGAACTTGACATGGCATAATGGAAAGCTAGAAAATTGGGAGTGCCAAATACTGGGAATGACTTATTACTAGTAAGTTTCTAGAATCTTTGAATTTGAATTTAAACGGAAATTGGCAATTTGTcacacatttgtaaaaaaaaaaaaaaaaaaaaaaaaaaagctgttttCTTCCTGTCATCGCCACAGACACCTTCGTGGTGGAGAAATGGGATGACAGGGGGCAGCTGAGGTGAGACTGATAAGGACAATGATTGTGCCCGGCGTTGGCATCCCGCGCCCGGAGCGTCTGTTGCTGATGttggtcctgctgtctgtctctgagtcGAGGCTCACTCAAGCTTGCCCTGGGCTCATCACTAGTGGCTGCAGCTGTACCGATGACCGCTCCAAAGCCCACTCCACTCAGACTGTTCGGAAAAGAGTCCGCTGCGGTAACGAAGAGCTTTCTGAAACTCCCGAGTCCGGTCTGCTACCGAACCAGACCGTTACTTTaatttTGAGCAACAATCGTATCAGGGTCCTGAGAAATGGATCCTTTGTTGGACTCTATGCCCTGGAGAAACTAGACCTCAGGAGCAACCTCATCAGCACCATCATGCCTGGAGCCTTCCAAGGTTTATCTGCTCTTCGGAAGCTTGACCTGTCCAACAACCGCATCGGCTGCTTGACTCCAGACATGTTCCAGGGACTCACCAACCTCACCAAACTGAACCTCTCTGGAAACATCTTATCTACCTTGGACTCGGGGGTCTTTCAGGAGCTCCACTCTCTTAAGCAAGTGAACTTCAACTCTGACTTCCTGTCATGTGACTGTGGGCTGCGCTGGGTGCCAGGTTACTTTCCTACCAGTACAGCGTGGCTGGGGGACGAGACCGTCTGTGCCTATCCCAAAAGCCTCCATGGAAAGCCTCTGCGTGGACTGAGGGAAAGTCAGCTGAGCTGTGATGGGCCTCTGGAGCTGCACACCCTGTCTCTCCTGCCCTCCCAGCGCCAGGTGGTCTTCAAGGGGGACCGAATGCCCTTCCACTGCACTGCCTCCCTGGTGGACAAAATCACTGCGATGCACTGGCGCCACAATGGCCAGCTGGTGACCTCTGACCCTGAACAGGGCATCAGTCTGGAGGCCAGCGTGGTGCATGACTGCACCTTCATCACCAGTGAGCTCATCCTGTCCAACGTGCATGTGGAGGCCAGTGGAGAGTGGGAGTGTGTGGTGGCCACTGGGCGGGGCAACACTTCCCGCAGTGTGGAGATAGTGGTGCTGGAGAACAGTGCCTCCTTCTGTCCGGAGGAGAGAGTCACTAACAACCGGGGGGAGTTCAAGTGGCAGAAGACCCTGGCAGGTATCACCTCCTACCAGTTCTGTCTCCAGCTGCGCTACCCCTCCCTGTCCATGGGGGGTGGTGTGGTGCAGAAGCAGGCATCACGCTACTGTGACCGCTCAGGGAGCTGGGAGGAGGGAGACTATGACAACTGTCTCTACACTAACGACATCACACGGGTCCTACACACCTTCATCCTGATGCCCATCAATGCCTCTAATGCGGCCACTCTGGCACGTCAGGTGCGTACCTACACTGTGGAGGCATCCGGTTTCACTGACACCATGGACGTGATGTACGTGGCCCAGATGATGGAGAAATTCATGGAATATATCCGACCACTGAGAGAGCTGTCAGAGATGCTGGTGGACATGGGCAGTAACCTGATGCAGGTGGATGATCAGATCCTGGCCCATgcccagagagagaagagagcctgCAGCTCCATAGTCCACTCTCTGGAGACTCTGGCCTGGCCCCAGCTACACAGCCATGCCCAGGACCTCTCCATGATCTCCAGGAACATTGTGATGGAGGCCCACCTTATCCGTCCGGCCCACTTCACTGGAATGAGCTGCACAGCCTACCAACGCAGGGAGACGTTGTTAGGCAACCTGGGCATGGAGGGGGCAGAGCCCACCCACGAACAGCAGCTCCGCTTCCGCTGCACCACTGGCACCCACAACACCTCCCTAAACAACTTCCCCATGAAGaATGCTGTAGCCCTGGCCTCTGTGGTTCTTCCTGCCTCTCTGTTCCCCCCGGACGCCCCGTCAGACTGTAAGCTCCAGTTTGTGGCGTTCCGTACAGGGAGGTTCTTCCCTTTCTCTGGGAACTCCAACGGTCCTGGAGAGCACGTCCGCAGACACAGTATCAACAGCCCAGTGGTCTACGTAGGCTTGGACGGGTGCAGTCTGTGGAACCACTCGGAGGCTATCCTGGTGTCCCTGCGTCACTTGACCCCAGGCAGCGAGCCGGTGGCGGCCCACTGGAGCTTACAGGCACTGCTGCAGAAGCAGGGGGGGTGGAGCCAGGAGGGCTGCCAACTAGCCCACACGGACTCTGCCACCTCCACCCTGCGCTGCTCTGTGCTCAGCAACTACGCTGTGTTGCAGGAGGTTCCTGACTTCCCCCACTCCCCACCCATGTCAGTGAGGGTGCTCCACCCTGTGGTTTACACCTGTACTGCaatcctcctcctctgcctcttcaccatcatcatcacacacATACTACACCACAGtTCTATAAATATATCCAGAAAGAGCTGGCACACCTTACTCAATACCTGCTTCCACATCGCTATGACCACAGCTGTGTACACAGGAGGCATCACCCTGACCAGCTACCCAATGGTGTGCCAGGCAGTGGGCATCGCTCTACACTACTCCTCCTTGTCTACTCTGCTGTGGATCGGTGTCAGCGCCAGAGTCCTCTACAAAGAGTCTGTCTGGAGGATACCACGGCAACCAGAGGGAGAGTCTACTGTTCCCCCTACTCAGCGGCCTATGCTCAGGTTCTATCTAATAGCTGGTGGTGTTCCTCTCATCGTATGTGGCATCACAGCAGCTGTCAACGTCAACAACTATGGGGACAACAACCCTTACTGCTGGTTGGTGTGGCGGCCCAGTTTGGGGGCCTTCTTTGTCCCCGCAGGCTTGGCGGTATTGGTGACCTGGATCTATTTCCTGTGCACTGTGTTTCGCCTGAGGCACCGGGTGTCCAAAGAGTGCCCAAGAttctccctgtcctcccctgtGCCTGAGAGCCAGCCAGCCCTGGGTGGCAGCACCAGCCTCCTGTCCACAGACTCTGTGGTGGGGACCATACATGCTGCGTTGACCCCAGAGGACCAGTACACCCTGAAGGTGCAGTTCCTGGTGCTGGTAGCCACCCACTTCCTGTTCCTGGCCCTGTGGAGCTGTGGAGCCATGGCCATGTGGCTGACAGGGCGCAGCAGCCTATTGTTCAGCTGTCTCTATGGAGTAGCTGCCACCGTGTTGGGGGTTTTCCTGGTGGTCCACCACTGCTTCCTACGCCTGGACGTGCAGGCCTCCTGGCTAAGGTGTTGTCCAGGAAATCGGCTCTCCCAGCCCATaccagtctacacacacacctgcaccacTGTGAGTGGGGTGCAGACCACCTCTGAACAGGGATCCCAGATCTTCATTGGCTGCCATCCTCCAGGAGATCCCCACAACACCTCATCAGCCAGGTCCTCCTCCACCCCCAGTGGGATCAGCAGTGTGGGCCCTGGGCCCTGCAAACTTACCAACCTGCTGCAGGTGGCACAAGAAAATACCAACAATGCCACGCGTGCCCCAGCAGGCATCAACACCAGCACCAGTACAGACAATAACAACAAGCAAGCTAACAACCTGCTGCCCACACTAGGCTCTGTAGCCCCTGTCCAGcctcagaggaggaaggtcaGTGGCAGAACTAAACAAGGGAGCAGTCAGTATCACCACCGAGGTGAAGGCAGAGGTCACTACCGTCTCAAAGCCATGAGGACTGGTGGGGGAGGGGGCAGTATGGGAGCACTGGGACCTACAGGTATAGAGCAGCACAACACTGCCCATCCAGCCCACAAACAGGCTACTAGTGAGAATGGCAGTCTCCATCACAGCCACTCTGAAAGCCCAGCCAGCCCGCTAACCAACGGTAACGGTAGGAGAGTGGGGGGGACAGTGACCACCAGCCCCTCAGAGGGTAGCGACGGGGGCAGCAGCGGCAGCCGTAAGCCCTTCCCTCTGCTCCCCTCTGTGGCCAGCAGGGTGGCCATGCAAGGTAATAGGTGCAGCGCCAGCCGAGACAATCTGAAACTGGCAGTGGCTGCAGAGCGGGAAGCTAAGCGCTGCTCCTACCCTCTGAACAGTATCACTACCACTGTGCCAGGGGCTGCCCCTAACGGCATCATCAAGAGCTCTGTGATAGAGCTGGAATTGGACACAAGTTGTACAGACCATTCCCAGAGCTCTGTGGGCATGAAAAGTATGTGGAAGAGTGAAACTACAGTGTGACACTCACTCTCTCCCAGCAAATGTCCACAGTGGACCCTGGCAATATTTGATATGACTGCTGTTGTTGTAGTGTCCTACACCTATAGAGACAAATCCTGATCTGAGATCCATGTGTGTAACTCCCCAGCTAGCatataacgttctgagaaccatatgtttcttatagagcttggtgagagcatggttgtcctatggttttTTTGTATAAAACCTTCCCACAACCTTTCTGCAAATGGTGCAGGAGAGTTGCTTgtctttggaacattctcagcacattcaaGGAGCTTGACCAAAAAAacgttcaaacatggttacatttaataaaaatgttggtaatgttctagaaacattctccaactggtttgacatttgGAATGTtgtcaaatagttcagagaactttaagaaacaacgttcttctgtgggaatgtcAGTACTTGAGCAtaatgtttcctacaggtttcgaATAAAACATAattaaatctaaatgtatttgtcacatgcttcgtaaacaacaggtgtagactaacaatgaaatgcttacttacaggtccttttccaacaatacagagttaaagataaagatAGAAAATCTAAATAGTGTCATGGTTATATTTAaggtcatgttctcaaattgttccaagaacgttaagaaacaacgttgTTCTCTGGGAATGTCATTACCATAGAATAACGTTTTCTACAAGCTTCTTCAAGGTTCTaattaaagtcatgttctcaaattgttccgagAACATTAAGTTaactttccataaaaaaaacacaacaaaactATAGTAACGTTCAGAAGAAGttttaagaatgttatttaaaaacatatatttccATTCATCCGCATCAATGAAACTCtttctatcctctatcttgttaagtgtgttcaggtgtgttggccttGCCCACTAATTGGCCATAACCGAGTGCTTCTTTCCCTGTAAAATGGGGTCcatttgaatagactaaaattaaAAGCTTTGTACTCgtaaaaaaacatggcatgctagctccatctgggtggcgcagtggactaattccatgaaTAGAGAACGTAAGattataggtttgaatctcactgatgcatcacaataaaaaatacatgtttttgcaTGATTAATTCCTAAGGAAattaatttccatgtgtcctgtctgtgcttggagttcaataAAGTTGACTCAAAATAAGCTAGTTGTGTTgctaaaagtcttattgaaacattcagttAACGTAATCCAAAAACCTCCAGATCACCTATAATTTCCGTTCTCAGAGCACTGGGTGAGACTTTCGTACATTTCATGTAAATAATTGCAAAGAACTTCAAGTTGCACTTGTGGATCTCAAATTGGGATTCAGCTCATAATGaggtttttattttaaatgtgtaAAGGAGATAGATCATGGGGTTGGAGATAGATCCTGGGGTTGGAGATAGATCATGGGGTTGGAGATAGATCATGGGGTTGGAGATAGATCATGGGGTTGGAGATAGATCATGGGGTTGGAGATAGATCCTGGGGTTGGAGATAGATCATGGGGTTGGAGATAGATCATGGGGTTGGAGATAGATCATGGGGTTGTGTTGCTTCTGACTTTTGCTTCCATCACAGTGATGGTATGGGATGTGTACTTTCATCTCTGTCACTTATGAACTGTTTGTTGGGTTTGCCAGGAATTCAAGGCCTGTCTTTTGTGTACCTAAAATACTCATTTATTCACAGGAAGTTTTACAAGCTAAGTCTAAAATTGACATAAGATGTTAATTTTGGATACCTTAAAGGGGCAATTTGCAGTTGTATTCTTATTCTGTGCATATCAACTATAGCATGAAATGGAATCTGAGATTGTCCATTTGTACAGTACGGCTATGCATTGCCTCTGTGAAGAATCCTTTTGCTCTTATTATGTTGACttgtattattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgcttccgtgaatatgtgtttgtgtgtgagatcCTTAATCTAGGATGAGAGAATGCAGTTTGTAAAATAATATGTTTTTACTAAAACTCGGATTCAAATACGCATCAGCACTGAGAGGGAACTTCTCCCCTTCATGAACAGGTTGGACAAGTATCGGTGTTTGGATAAAATGAACTAAGAGTGACGTTTCTTTGACCCTGGCATGTACTCGGAAATGTTCCTGGTTATTTTTCATATGAACTGCCCCATCCTTCTTCCTTTTTCCGTTTTCCCTTACTGGCCTATGTTCAGTTCGGGATAAAAACGTACTGTAACATTCAATTAAACGGAAACAGTGCTGTTCTGAATGACCAGTTCAAAAACAGGGAGGGATTGGGTTGTGGGCTGTGGAACGCTGTCAGCATGGCCGCTACCCTTTAAATATGTCACTCACTGCTTCAAGCCACACCCCACCAAACGGAGAAAACGTACCTCAAAGTCTGTTCAAGAACGTTGAAGAACAATTTGGGGAAATGTGTCATTCGGTACAAATGGTTACACAGTGTACCAAATGTTCAATCGAACTGAACGCACGCTCTCACACCCTCGGAGTTTCAAATCTCTGGATTTACACTTATCTAAACACTGCCCCCTCCAGGATTTCAAACATCATTGTTCATGCGCTGACAAGTCAAAGGGATGCATCAGTAAAACCATGTTCAGTTTGTCATCTGCATCAGGAGACTATGTTAACGCTTGTTAAATTATGTGGTAAATGGCTCTGGTTTCTAACACATTAATCAAGATACAGTAAGTGcttactgacccccccccccccccacgctccccacacatacacacacacacacatttacctcATAAACGAATGGCTTAGAAGCTTGTTACAGTAAAAATCAACTACTTCTACACTATTTCTTTCTATCAATGTACAAAGCTCAGAGTAAAGGCAAAATAAATGATGACAGAACTGATTCATGTTATCTACATAATTGCCTCATGTTTCTTCACACACTTTATCATCCAATATTGTGTAAAATCATATTATGCTATTTTGATCTTGAGTATTCTTTCAGAGTGTGTAAGAATGCAACAACTCAGTGCATCTTAGATAAACTCCTCTAAACAACTCCAATGTGTTCAGGGAAATTATTATGCCaaagaattttgtagaatagcagAGCTTACCTCAACATCAGTGTTTAGCAAATTGGATGCATTTCATAGATTGTATCCTTATTCTAGGTCCTGAAATCTCCCTTTGGGTTAATGTTAATAACTCAAACTCACAAAGCTCAGATTTGTGATAAGTACAAAGCAGTGGTATCATATACGTGAATACATGTATTGCATTTAATTGTTGAGGGGATGTCAAACTGCTAAACCTGCGGTAGTGGCCGGTCACAACATGTTTATATAACCTGTGTCTGATATTCATGAGTTTACCTTCTACAACACGTTGTCACTGGAAAAAAACACCCTTCTTATTCCACTTATTGACATTAGGTATTAAATGTCAAAATGTGCAAGAACACAATGATAAAATGTGTCATCTTTTCACTCATGGTTACCCAGATTTACATTTCATCCATTTACTAACATTCATCACATTGGTGATAGGTCCCAAAATGATTTCCAAGTTTTGTGTCCACTTTCATCTCAAATTGAAAAAGGGAGATTTCAAAATGttgtatgtatatttatattttaatttGTCACAGTGACATCAGAATGAAATGATTGTGACAAATAACTGTTTTTAATTCAATAATATATTGTTCAAGAAATTCAGACTGTGCCTTATAGAAAAAACTCAtgcaaaattaaaaaaaatacaactttg

Function

NR:

description
adhesion G protein-coupled receptor A2-like

GO: NA

KEGG:

id description
K08461 ADGRA2, GPR124; adhesion G protein-coupled receptor A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605987.2 True 8846 mRNA 0.47 19 28044805 28105169

Neighbor

gene id symbol gene type direction distance location
LOC110525658 LOC100195761 coding downstream 505 28028176 ~ 28044300 (-)
LOC110525655 LOC106585601 coding downstream 177525 27827231 ~ 27885634 (-)
LOC118965072 LOC106579843 coding downstream 224603 27817576 ~ 27820202 (-)
LOC110525654 LOC106585600 coding downstream 231923 27798270 ~ 27812882 (-)
LOC110525653 NA coding downstream 307781 27734995 ~ 27737024 (-)
LOC110525660 pdli2 coding upstream 5799 28110968 ~ 28180720 (-)
LOC110525662 LOC106585608 coding upstream 88339 28193508 ~ 28247237 (-)
LOC110525663 lincr coding upstream 151319 28256488 ~ 28259851 (-)
LOC118964856 NA coding upstream 161648 28266817 ~ 28273722 (-)
LOC110525665 LOC106585609 coding upstream 171494 28276663 ~ 28309727 (-)
G492298 NA non-coding downstream 129070 27915507 ~ 27915735 (-)
G492297 NA non-coding downstream 129508 27915047 ~ 27915297 (-)
G492295 NA non-coding downstream 130331 27914275 ~ 27914474 (-)
G492289 NA non-coding downstream 135035 27909566 ~ 27909770 (-)
G492284 NA non-coding downstream 148287 27896282 ~ 27896518 (-)
G492556 NA non-coding upstream 23176 28128345 ~ 28129238 (-)
G492569 NA non-coding upstream 46190 28151359 ~ 28153068 (-)
G492594 NA non-coding upstream 76327 28181496 ~ 28181863 (-)
G492596 NA non-coding upstream 80401 28185570 ~ 28185808 (-)
G491539 NA other downstream 800612 27216607 ~ 27244193 (-)
G491291 NA other downstream 1177647 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 1493178 26481087 ~ 26551627 (-)
G494389 LOC106585296 other upstream 1306046 29411215 ~ 29415314 (-)
LOC110525681 hectd4 other upstream 1373486 29411204 ~ 29483533 (-)
LOC110525684 LOC106585295 other upstream 1397084 29502192 ~ 29520980 (-)
G494542 NA other upstream 1570154 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 2421517 30526034 ~ 30527686 (-)

Expression


Co-expression Network