tgoln2 (LOC106585618)


Basic Information

Item Value
gene id tgoln2
gene name LOC106585618
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 28543021 ~ 28552161 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979782.1
tacactctTGGTTTTGGCAGATTTGAACAGTAGGAGGAAGAAGGAAGTGTTTATATCAGGATTTGAGTCATCACCTTTGAGCCAAGCATTATTGGGAACTCTTTCCGTAGTAAATTCTTATATCTGACTAGGTTTGTTTTGCCTCAAAGCTACAATGAAAACAATATCTATGTTGTTTATCGTGCTGGTTTATTTGTCTGGTGGTGTCAGAGGTCCTCCTCAAGGAGACTCAAAGGATCTATTACCAAATTCTCTATCTGTAAGAGATATGCCAGCACAGAACATTTCTGCAAAGGACATTTCAGCACCAGGAGTATCTACTGGAAATAAACCAGAAGCAGGAGTATCTACTGAGAAGGAAACAACACTGGCACCAGGAGCCTCTCCTGAAAAGGAAACGACACTGGCACCAGGAGCCTCTCCTGAAAAGGAAACGACACTGGCACCAGGAGCCTCTCCTGAAAAGGAAACGACACTGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGAAGACCCAGCTGGAAAGGAAACGGCACCAGAAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACCCATGGCACACGTGATGAGGCAGAGAGCAGTCACTTCTTTGCTTATcttgtgtgttcagctgtgttggtgGCAGTGCTCTACATTAGCTACCACAATAAGCGGAAGATCATTGCCTATTGCGTCGAGGGAAAGAGGTCGAGATCGGGACGTCGGCCCAAAGGCGCAGAGTACACCAAGCTGGAACAGAATTAGTGAAGAATGTCATGAAGTCATTGCCAGAAAACTGTGGATATAGGTGTTAAGATGAAATAAGGCACCAAACTGATTCCTGGGGAAAGAAGACTTGCTTGGTTTaatcaaaacatatatattttttttacaaatgggTATTACTTAATAGATGTTTGTCTTTGGATGCTTATTGCATGACTATGCAGAGGATACTGTTGCTGAGAAAGATAAGCATGCTTGTGTTTGCACTCTTGTGTTATTGTGGTACTTTGGGGCATCCTTTGTTCTCAGTCAGTCCATAATACCTTGATGTACTGACTAAATTTGGCAGAAGTAAATTGGGCCTGGGTAGGCTAGTGCGAAAATTAATGCACGTGCAGGGCTCTCCCAAGGATTTGAGCTATCTAGCATGCGAAGGGGGGCATTATGTAATTTATGTTCTTTCTAAAGAgggacatttttatttatttaactaggcaagtcagtttatgaacaaattcttatttacaatgactgcctaccccagccaaacccggacgatgctgggccaattgtgtgcagccctatgggactcccaatcacggccagatgtgattcagtctggatttgaaccaggggctgtagtgatgcctcttgcactgaggtgcaatgccttagaccgctgcgccactcaggaccCAAAAATAGCTGATCTGTCCCAAACTTTTCATGGTCTCAACAAAGCTGTCCTTTGAGGGCTTTAGGTAGGGTAGACATTTTGGCAAAATTAAGAGTTGATTAACATTCCGAGGAATGTAGAAGATAAAAATATTATCCAATTGAAGAATATCTAAGACTGAGCCAGTGTATATTTCTCTCCTGTGGCTGCGTCCTAAATGATGACTATATTTCTACCCAGGGCCTTGTTTCACAGAGAACTTTCCGTACAATGTGCTTTTCAATAGTTGAGTATATGGCAAATGGAAGTAGTCATTTTGCACAGATCCTTTTTGTATGCTGGACCAATTTAAGCTAAATTGGATTAGAAATGACATTTTCTACTATACTTGCCGTGGTTGGTCACTGTCACAACAATgcaaatgtttttcttttttgGTGGGAGTTGAaatgaataaaatgtatttaacaatT
>XM_036979783.1
tacactctTGGTTTTGGCAGATTTGAACAGTAGGAGGAAGAAGGAAGTGTTTATATCAGGATTTGAGTCATCACCTTTGAGCCAAGCATTATTGGGAACTCTTTCCGTAGTAAATTCTTATATCTGACTAGGTTTGTTTTGCCTCAAAGCTACAATGAAAACAATATCTATGTTGTTTATCGTGCTGGTTTATTTGTCTGGTGGTGTCAGAGGTCCTCCTCAAGGAGACTCAAAGGATCTATTACCAAATTCTCTATCTGTAAGAGATATGCCAGCACAGAACATTTCTGCAAAGGACATTTCAGCACCAGGAGTATCTACTGGAAATAAACCAGAAGCAGGAGTATCTACTGAGAAGGAAACAACACTGGCACCAGGAGCCTCTCCTGAAAAGGAAACGACACTGGCACCAGGAGCCTCTCCTGAAAAGGAAACGACACTGGCACCAGGAGCCTCTCCTGAAAAGGAAACGACACTGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGAAGACCCAGCTGGAAAGGAAACGGCACCAGAAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACCCATGGCACACGTGATGAGGCAGAGAGCAGTCACTTCTTTGCTTATcttgtgtgttcagctgtgttggtgGCAGTGCTCTACATTAGCTACCACAATAAGCGGAAGATCATTGCCTATTGCGTCGAGGGAAAGAGGTCGAGATCGGGACGTCGGCCCAAAGGCGCAGAGTACACCAAGCTGGAACAGAATTGAAGAATGTCATGAAGTCATTGCCAGAAAACTGTGGATATAGGTGTTAAGATGAAATAAGGCACCAAACTGATTCCTGGGGAAAGAAGACTTGCTTGGTTTaatcaaaacatatatattttttttacaaatgggTATTACTTAATAGATGTTTGTCTTTGGATGCTTATTGCATGACTATGCAGAGGATACTGTTGCTGAGAAAGATAAGCATGCTTGTGTTTGCACTCTTGTGTTATTGTGGTACTTTGGGGCATCCTTTGTTCTCAGTCAGTCCATAATACCTTGATGTACTGACTAAATTTGGCAGAAGTAAATTGGGCCTGGGTAGGCTAGTGCGAAAATTAATGCACGTGCAGGGCTCTCCCAAGGATTTGAGCTATCTAGCATGCGAAGGGGGGCATTATGTAATTTATGTTCTTTCTAAAGAgggacatttttatttatttaactaggcaagtcagtttatgaacaaattcttatttacaatgactgcctaccccagccaaacccggacgatgctgggccaattgtgtgcagccctatgggactcccaatcacggccagatgtgattcagtctggatttgaaccaggggctgtagtgatgcctcttgcactgaggtgcaatgccttagaccgctgcgccactcaggaccCAAAAATAGCTGATCTGTCCCAAACTTTTCATGGTCTCAACAAAGCTGTCCTTTGAGGGCTTTAGGTAGGGTAGACATTTTGGCAAAATTAAGAGTTGATTAACATTCCGAGGAATGTAGAAGATAAAAATATTATCCAATTGAAGAATATCTAAGACTGAGCCAGTGTATATTTCTCTCCTGTGGCTGCGTCCTAAATGATGACTATATTTCTACCCAGGGCCTTGTTTCACAGAGAACTTTCCGTACAATGTGCTTTTCAATAGTTGAGTATATGGCAAATGGAAGTAGTCATTTTGCACAGATCCTTTTTGTATGCTGGACCAATTTAAGCTAAATTGGATTAGAAATGACATTTTCTACTATACTTGCCGTGGTTGGTCACTGTCACAACAATgcaaatgtttttcttttttgGTGGGAGTTGAaatgaataaaatgtatttaacaatT
>XM_036979784.1
tacactctTGGTTTTGGCAGATTTGAACAGTAGGAGGAAGAAGGAAGTGTTTATATCAGGATTTGAGTCATCACCTTTGAGCCAAGCATTATTGGGAACTCTTTCCGTAGTAAATTCTTATATCTGACTAGGTTTGTTTTGCCTCAAAGCTACAATGAAAACAATATCTATGTTGTTTATCGTGCTGGTTTATTTGTCTGGTGGTGTCAGAGGTCCTCCTCAAGGAGACTCAAAGGATCTATTACCAAATTCTCTATCTGTAAGAGATATGCCAGCACAGAACATTTCTGCAAAGGACATTTCAGCACCAGGAGTATCTACTGGAAATAAACCAGAAGCAGGAGTATCTACTGAGAAGGAAACAACACTGGCACCAGCTGGAAAGGAAACGGCACCAGAAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACCCATGGCACACGTGATGAGGCAGAGAGCAGTCACTTCTTTGCTTATcttgtgtgttcagctgtgttggtgGCAGTGCTCTACATTAGCTACCACAATAAGCGGAAGATCATTGCCTATTGCGTCGAGGGAAAGAGGTCGAGATCGGGACGTCGGCCCAAAGGCGCAGAGTACACCAAGCTGGAACAGAATTAGTGAAGAATGTCATGAAGTCATTGCCAGAAAACTGTGGATATAGGTGTTAAGATGAAATAAGGCACCAAACTGATTCCTGGGGAAAGAAGACTTGCTTGGTTTaatcaaaacatatatattttttttacaaatgggTATTACTTAATAGATGTTTGTCTTTGGATGCTTATTGCATGACTATGCAGAGGATACTGTTGCTGAGAAAGATAAGCATGCTTGTGTTTGCACTCTTGTGTTATTGTGGTACTTTGGGGCATCCTTTGTTCTCAGTCAGTCCATAATACCTTGATGTACTGACTAAATTTGGCAGAAGTAAATTGGGCCTGGGTAGGCTAGTGCGAAAATTAATGCACGTGCAGGGCTCTCCCAAGGATTTGAGCTATCTAGCATGCGAAGGGGGGCATTATGTAATTTATGTTCTTTCTAAAGAgggacatttttatttatttaactaggcaagtcagtttatgaacaaattcttatttacaatgactgcctaccccagccaaacccggacgatgctgggccaattgtgtgcagccctatgggactcccaatcacggccagatgtgattcagtctggatttgaaccaggggctgtagtgatgcctcttgcactgaggtgcaatgccttagaccgctgcgccactcaggaccCAAAAATAGCTGATCTGTCCCAAACTTTTCATGGTCTCAACAAAGCTGTCCTTTGAGGGCTTTAGGTAGGGTAGACATTTTGGCAAAATTAAGAGTTGATTAACATTCCGAGGAATGTAGAAGATAAAAATATTATCCAATTGAAGAATATCTAAGACTGAGCCAGTGTATATTTCTCTCCTGTGGCTGCGTCCTAAATGATGACTATATTTCTACCCAGGGCCTTGTTTCACAGAGAACTTTCCGTACAATGTGCTTTTCAATAGTTGAGTATATGGCAAATGGAAGTAGTCATTTTGCACAGATCCTTTTTGTATGCTGGACCAATTTAAGCTAAATTGGATTAGAAATGACATTTTCTACTATACTTGCCGTGGTTGGTCACTGTCACAACAATgcaaatgtttttcttttttgGTGGGAGTTGAaatgaataaaatgtatttaacaatT
>XM_036979785.1
tacactctTGGTTTTGGCAGATTTGAACAGTAGGAGGAAGAAGGAAGTGTTTATATCAGGATTTGAGTCATCACCTTTGAGCCAAGCATTATTGGGAACTCTTTCCGTAGTAAATTCTTATATCTGACTAGGTTTGTTTTGCCTCAAAGCTACAATGAAAACAATATCTATGTTGTTTATCGTGCTGGTTTATTTGTCTGGTGGTGTCAGAGGTCCTCCTCAAGGAGACTCAAAGGATCTATTACCAAATTCTCTATCTGTAAGAGATATGCCAGCACAGAACATTTCTGCAAAGGACATTTCAGCACCAGGAGTATCTACTGGAAATAAACCAGAAGCAGGAGTATCTACTGAGAAGGAAACAACACTGGCACCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCAGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACGGCACCAGTAGACCCGGCTGGAAAGGAAACCCATGGCACACGTGATGAGGCAGAGAGCAGTCACTTCTTTGCTTATcttgtgtgttcagctgtgttggtgGCAGTGCTCTACATTAGCTACCACAATAAGCGGAAGATCATTGCCTATTGCGTCGAGGGAAAGAGGTCGAGATCGGGACGTCGGCCCAAAGGCGCAGAGTACACCAAGCTGGAACAGAATTAGTGAAGAATGTCATGAAGTCATTGCCAGAAAACTGTGGATATAGGTGTTAAGATGAAATAAGGCACCAAACTGATTCCTGGGGAAAGAAGACTTGCTTGGTTTaatcaaaacatatatattttttttacaaatgggTATTACTTAATAGATGTTTGTCTTTGGATGCTTATTGCATGACTATGCAGAGGATACTGTTGCTGAGAAAGATAAGCATGCTTGTGTTTGCACTCTTGTGTTATTGTGGTACTTTGGGGCATCCTTTGTTCTCAGTCAGTCCATAATACCTTGATGTACTGACTAAATTTGGCAGAAGTAAATTGGGCCTGGGTAGGCTAGTGCGAAAATTAATGCACGTGCAGGGCTCTCCCAAGGATTTGAGCTATCTAGCATGCGAAGGGGGGCATTATGTAATTTATGTTCTTTCTAAAGAgggacatttttatttatttaactaggcaagtcagtttatgaacaaattcttatttacaatgactgcctaccccagccaaacccggacgatgctgggccaattgtgtgcagccctatgggactcccaatcacggccagatgtgattcagtctggatttgaaccaggggctgtagtgatgcctcttgcactgaggtgcaatgccttagaccgctgcgccactcaggaccCAAAAATAGCTGATCTGTCCCAAACTTTTCATGGTCTCAACAAAGCTGTCCTTTGAGGGCTTTAGGTAGGGTAGACATTTTGGCAAAATTAAGAGTTGATTAACATTCCGAGGAATGTAGAAGATAAAAATATTATCCAATTGAAGAATATCTAAGACTGAGCCAGTGTATATTTCTCTCCTGTGGCTGCGTCCTAAATGATGACTATATTTCTACCCAGGGCCTTGTTTCACAGAGAACTTTCCGTACAATGTGCTTTTCAATAGTTGAGTATATGGCAAATGGAAGTAGTCATTTTGCACAGATCCTTTTTGTATGCTGGACCAATTTAAGCTAAATTGGATTAGAAATGACATTTTCTACTATACTTGCCGTGGTTGGTCACTGTCACAACAATgcaaatgtttttcttttttgGTGGGAGTTGAaatgaataaaatgtatttaacaatT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979782.1 False 2290 mRNA 0.45 4 28543021 28552161
XM_036979783.1 False 2287 mRNA 0.45 4 28543021 28552161
XM_036979784.1 False 2143 mRNA 0.45 5 28543021 28552161
XM_036979785.1 True 2113 mRNA 0.44 5 28543021 28552161

Neighbor

gene id symbol gene type direction distance location
LOC110526333 LOC106585616 coding upstream 7436 28487813 ~ 28535585 (+)
LOC110525670 LOC106585612 coding upstream 142698 28392387 ~ 28400323 (+)
LOC110525669 NA coding upstream 169754 28370701 ~ 28373267 (+)
LOC110525664 LOC106585346 coding upstream 276303 28262778 ~ 28266718 (+)
LOC110525656 LOC106585605 coding upstream 517659 28019895 ~ 28025362 (+)
LOC110525677 NA coding downstream 4644 28556805 ~ 28563758 (+)
LOC110525680 LOC106585298 coding downstream 851589 29403750 ~ 29407010 (+)
trnaa-ugc-16 NA coding downstream 1012966 29565127 ~ 29565202 (+)
LOC110525686 LOC106585293 coding downstream 1023870 29576031 ~ 29586860 (+)
LOC110525687 tmed2 coding downstream 1037319 29589480 ~ 29594567 (+)
G492827 NA non-coding upstream 192 28542610 ~ 28542829 (+)
G492824 NA non-coding upstream 3001 28539809 ~ 28540020 (+)
G492784 NA non-coding upstream 57806 28484933 ~ 28485215 (+)
G492783 NA non-coding upstream 58289 28484459 ~ 28484732 (+)
G492728 NA non-coding upstream 109744 28430062 ~ 28433277 (+)
G492835 NA non-coding downstream 12170 28564331 ~ 28565127 (+)
G492818 NA non-coding downstream 19191 28571352 ~ 28573832 (+)
G492791 NA non-coding downstream 27172 28579333 ~ 28581308 (+)
G492842 NA non-coding downstream 34141 28586302 ~ 28586775 (+)
LOC110525650 LOC106585598 other upstream 751451 27738953 ~ 27793944 (+)
LOC110525642 bin3 other upstream 1000026 27488557 ~ 27543022 (+)
G489447 NA other upstream 2858710 25683686 ~ 25684311 (+)
si:dkey-191c17.2 LOC106585342 other upstream 2903329 25638816 ~ 25641178 (+)
G493450 NA other downstream 437269 28989430 ~ 28990734 (+)
LOC110525701 LOC106585276 other downstream 1319851 29871980 ~ 29880651 (+)
G494065 NA other downstream 1532423 30084584 ~ 30129769 (+)
G494946 NA other downstream 1769861 30322022 ~ 30344847 (+)
G494943 NA other downstream 1883801 30435962 ~ 30436685 (+)

Expression


Co-expression Network