Item | Value |
---|---|
gene id | LOC110525684 |
gene name | LOC106585295 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 29502192 ~ 29520980 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036979797.1 | False | 2630 | mRNA | 0.45 | 7 | 29502192 | 29520677 |
XM_036979798.1 | False | 2558 | mRNA | 0.45 | 7 | 29502192 | 29520677 |
XM_036979800.1 | False | 1826 | mRNA | 0.45 | 7 | 29502192 | 29520688 |
XM_036979799.1 | False | 2634 | mRNA | 0.46 | 8 | 29502192 | 29520980 |
TU561743 | True | 924 | TUCP | 0.44 | 2 | 29502253 | 29503391 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110525681 | hectd4 | coding | downstream | 18659 | 29411204 ~ 29483533 (-) |
LOC110525683 | NA | coding | downstream | 86850 | 29414761 ~ 29415342 (-) |
LOC110526490 | LOC106580375 | coding | downstream | 103304 | 29070716 ~ 29398888 (-) |
LOC110525679 | LOC106585622 | coding | downstream | 432180 | 29023208 ~ 29070012 (-) |
LOC110525678 | LOC106585621 | coding | downstream | 491476 | 28989407 ~ 29010716 (-) |
LOC110525685 | LOC106585294 | coding | upstream | 5803 | 29526783 ~ 29575598 (-) |
LOC110526522 | LOC106585290 | coding | upstream | 74436 | 29595416 ~ 29596809 (-) |
LOC110525693 | NA | coding | upstream | 129223 | 29650203 ~ 29654088 (-) |
LOC110525694 | LOC106585282 | coding | upstream | 185079 | 29706059 ~ 29754403 (-) |
LOC110525696 | LOC106585281 | coding | upstream | 233922 | 29754902 ~ 29760372 (-) |
G494404 | NA | non-coding | downstream | 37978 | 29463891 ~ 29464214 (-) |
G494402 | NA | non-coding | downstream | 42610 | 29459281 ~ 29459582 (-) |
G494401 | NA | non-coding | downstream | 46624 | 29455359 ~ 29455568 (-) |
G494378 | NA | non-coding | downstream | 94476 | 29399840 ~ 29407716 (-) |
G494496 | NA | non-coding | upstream | 89843 | 29610823 ~ 29611022 (-) |
G494497 | psmd9 | non-coding | upstream | 95593 | 29616573 ~ 29623212 (-) |
G494503 | NA | non-coding | upstream | 104060 | 29625040 ~ 29625323 (-) |
G494504 | NA | non-coding | upstream | 104480 | 29625460 ~ 29625716 (-) |
G494505 | NA | non-coding | upstream | 105512 | 29626492 ~ 29626703 (-) |
G494389 | LOC106585296 | other | downstream | 86878 | 29411215 ~ 29415314 (-) |
LOC110525655 | LOC106585601 | other | downstream | 1666890 | 27827231 ~ 27885634 (-) |
LOC110525653 | NA | other | downstream | 1765214 | 27734995 ~ 27737024 (-) |
G491539 | NA | other | downstream | 2257999 | 27216607 ~ 27244193 (-) |
G494542 | NA | other | upstream | 154343 | 29675323 ~ 29675573 (-) |
LOC110525714 | LOC106585251 | other | upstream | 1005706 | 30526034 ~ 30527686 (-) |
G495554 | NA | other | upstream | 1024422 | 30545402 ~ 30549450 (-) |
G495560 | NA | other | upstream | 1054138 | 30575118 ~ 30575573 (-) |
G496772 | NA | other | upstream | 2140413 | 31661393 ~ 31661618 (-) |