LOC110525733 (LOC106584983)


Basic Information

Item Value
gene id LOC110525733
gene name LOC106584983
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31215076 ~ 31305586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979876.1
AGCGCGGTTACCGCTGCGGTATGCGCGATCCACAGGGCTGTTTGACAGGCGGTCTGGACACGAAGAGAATAGACAGGTCGTCTCACCGCGACACGCTGGCGGCATCATACCGACATTGACCCAAATATATGACAGCGGTGTACAGAAAGGATAGTCTCCCGCCTACCGTGTTCAATTTCATTTGGTTTGCTTCAAGGACCATATTCCACGTTCTTCTCTCATTGTAAATAAACGTGTGGTAGCATCCAATTAATGTTTTATAGAACTGGACCCAGATTGGTTTGTAACGGGATTGAGAAACTCAGTGACAGAACACCCACGCATGGACGTTATGGCGAATTCATAAATTAGTTACCCTATCTCAACATTTAGACTACCACTGGATCTATTTTCTTGACATTGTGAGGAATTTTCTCCAAGCGAGGACCAAGATTGTGCATGAGAGCTGTTTTCAGACCCATTCTTATTTCAGAGTTGCATCTTTCTGTTACCCGCGCATTAGGTTCAACCAAAGATTTCCTGAATATGCGGTAATGGATTGTACTCACCTTTGGATGTCTCTCTCATGACTCCTATTTGAGATGGCGAGCCACAACCTCCGTCACAGACCGTCACGGTGAATGGCTGGAGGGAATACAAGCGTCTTCCGTCTGCGTGGCGGTGGAAAGGGCCTCTGTGGAGCTGTGGTCGTCTCTCAGTCTCAGCAAATCACCTTTCCTGCCATGGCCCCACCATCAGCTCTCTGCCCTCCTGATGCTTTCTCAGAGGGAatgtagagagacacacactggagacacactctccagcactacacacacacacaccttcatgcagagatcccatacacacacacactccttagcACAAGATAcctttgttgtgtgtgtttttttacctAGTAGGCAATTATTTTTCCCCAACCATTGGATTTGGACTCTCTGTCCTGTGTGATTGAACCTCTTAGTAGCTTTAGGGGGGTGTTGTCCTGCTCTGCTGCTTTATGGTTGGGTTTCACTGGGACGTTGTGACTGAGCAGGGGGAGCCAGCATGGCCAGGCCTCTGCTGAAAATCCAACGCTACTTTCGCAGGAAACCTGTGCGCTTCttctccttcatcctcctctaCCTGACAGCTGGGAGCCTGGTGTTCCTGCACACTGGCTTTGTAGGGGACAGCTCCACAGGGGAAAATGGGGGCCGGGACCCCATGGTAGCATCTGGGATAGGGAACAGGGTGGCCTCCTCAGACGGCCGGGGGGTAGGAATGATGGGGAGGGTGTTGAAAGATACACGCAGACCCACCCCGCGGAGGTACGGCCCTCCCTGGATGAAAGGGGCTGGTGGGAAGGACTGGGAGGGTAGGGGAGTAGACTACACTAGCAGCTGGAACCGCGCCCTCAAGGGACGCAACGCCAAAGATCTGGACGACGGACGGGCGAAGTACATCGGCTGCTATATCGACGACACAGCAAAAAGAGCACTTAGGGGAGTGTCCTTTTTCGACTACAAGAAAATGACGGTCTTCCGTTGCCAGGACAACTGTGCTGAAAGGGGATACCTGTATTCAGGCCTAGAGTTTGGGGCGGAGTGCTACTGTGGCCACAAGATCCAGGCCCCCAATGCCTCTGAGAGTGAATGCATCATGCAGTGTAAGGGCGACAAGGGCAACCTGTGTGGAGGGGCCAATCGCCTGTCCATCTACAGACTGGAGCTGAGCCAGGAGTCAGCGCGCCACTATGGGAGTGCCATCTTTAAGGGGTGCTTCCACAGGCCTGACAACGTCACCCTGGCCCTGCCCATCAGCGCTGTCATCCAGAACATGTCAGTGGAGAAGTGTGTGGACATGTGTACGGAGAAGGAGCTGTCCCTAGCGGTCCTAGCTGGAGACAGGTGTCTCTGTGGGTTCCCCACCCCCCACTTCTCCCTCCATGAGATGGAGGATGAGGACCTGTGCCTGCACCGCTGCCATGGCGAGGAGTTTGAGAGCTGTGGGAATGACGAGTACTTTGTGGTGTACCAGACACAGGTCCAAGATAACCGCTGCATGGACCGGCGCTTCCTGCCCACGCGTTCCAAGCAGCTGATTGCTCTGGCCAGCTTCCCCGGGGCTGGCAACACCTGGGCCCGCCACCTCATAGAGCTGGCCACCGGCTTCTACACAGGCAGCTACTACTTTGATGGCTCCCTCTACAACAAAGGCTTCAAAGGTGAGCGAGACCATTGGCGGAGTGGTAGGACCATCTGCATTAAAACACATGAGAGTGGCAAGAAGGAGATTGAAGCCTTTGACGCCAGCATCGTCATGATCCGCAACCCTTACAAAGCCCTCATGGCTGAGTTCAACCGCAAGTACGGCGGCCATATTGGATTCGCCTCTCAGGCCCACTGGAGAGGGAAAGAGTGGCCTGAGTTTGTGAAGAACTATGCTCCTTGGTGGGCGTCCCACACACTGGATTGGCTGCGTTATGGGAGGAATGTCCATGTGGTCCACTTTGAGGAGCTGAAGAGGGAGCTGTTCTCTAAGCTCAAGGACATGGTCCTGTTTCTGGACCTGGAGGTGGCCgaggaacgcctactctgtgtaGAGGGACAGAAGGACGGTAAATTCAAGCGCTCCGGCCTGCGTAAACTGGATTATGACCCGTACACACCTGAGATGCGCACTAGCATTGACGAACTGGTCATGACTGTGGACGCTTCCCTAAAGAAGAGGAACATGGCCGGGGTGCCGAAGGAGTACCGACCCACTCTGAGATAatatctcctctcctttccctctctctctctctccatttctcactCTGTTCTTCTATCCCTTCCCTTCGTTCTAGGATTAATTCATGCCATCCATGTCCAAATGGCTTCAAATATAAAAGTCACATGAACTGAAAATCTATGTGTAGGAAATACGTTTTTATTTAATATACTTCTCTGTTCCCCACcacttctctgtctccttctttcTCACATCCCTTTCCTTTATTTGTTTGACTGACAGGCACACAACCGTATTGATTAGGAGAACAAATACTCTTTCATGAAATGGTTTGAAATGTCACAAAACCTTTTAATGATCTGTCATTTTCaactaaatgttttgttttgttagataTGAAAAATCTATACCTCAACTTGCTGAATACAGTATGTTTGAGAGCCACTATATTTAAAATTAGGAGGTGGTCAAAACCGTACTATTGGACTTGGATTTGGTTGGCGAAAACCCCTGTGTCCATCTATAGGAGGTAATGAATGGGACTGAACACTCATCTCTCCGTCTACCCCTGTGGACACACCATGAGGCTAGATCTTCACTCTTCTCCTCATACTTCAGCAGTATTCTAACAAGAAGAGGTAATACAGCACTATCAAACAGCTGCTCTGCTTCTCTGAAGCAGTGGCCTCTCTTAAAACTGTGCTGCATCAGTCCTACTGAGTCATTACATCTGTGCATTACAGCTgtccttttggttactggcaacagctctggaacACTAAATAATTAACTCTACATAGTTTATTTTGACCATCAGGCTCTATGGAACACTCCTGACTCTTGTCAAGACAGCCCTTTCAATAACTAGCCTCGACTCATCGACAGCTTGTTCGTCCTTGGTCTCCTCAGATGTGGTCAGCCAGACACACTGCGCATGATACATttattgtggatttattgaaTGGAGTTTTCTGCAAACAGCGCTATTTTGAAACTACCACTTCTGCTAAATCACTCTGCAGAACTTGTTGCTTTCCTTATAATGGTGGTTTGAAGCAAAATTACAATGTGGTGCCTTTTCTGTCAGCTAACTGTTGGCTTTAAGTTGAAATGTAGGGAAAATAAAATGATTACTAATATCAAATATTATTGGTAATGTGAATACATTATTGATGATATTTGATGTTAAACTGTCCGCTTAATGCATCATCAGACACACTAGTGTCGAGCTTATGAAACAAAATACCAAGGATGTTGTTATGCAATTATTGCAAATATTGTGTCAGTGCAATGCACTGATCGAATGTTTGAGATTTCCATTTGGCTCATAACTTAATACAGGCTGGGAAGAGGCAGGGTTAACAATCAATAATTGTATGCCACCTCACTGTGTGGCTGAGGCACGTTAGATCAGTATTGTGGAGTTATCAAGCATACCCTGATAGTTTAACACTTCAAATTATACATTTGTATGGGGGGGCAGTCAAATTTGCCTGCCTATAATGACTCAAACACACCAAAATCAATCAAAATGAACATTGTGTCTCTGTTTGAGTGACTTCATAACTAAGAGATAATCATATTTGTCTTCATAATAAGATAATAATATTTGTCTTCATAATAAGATAATATTTGTCTTCATTTATTTAACTTGAATATGATCCAAAAagtgtttcactgtaaggttaaTACAGCTGTAGCATGTACTGTAGCTGCACGCTTACTACCCCAAAGGCCCAAAAGGCATTTATTCAAGTTATAGATGATATGAGATGAGAGTTTTCCCCTCAATGCTTTTTTTTCTTGATATACGATCCCTGATCATTTTTGTTGAAGGTGAGTAGTAATGCTGAAAGTGACGCACCCCATTTTCTCGATTGCTTTGGTATCGCAAAACAAGCTACATGTACAGGTATATAATAGTCCCAGCCATAGGTAATGTGCAACAGAGAATAGAAAGCTAATATACATCAAAATAATCTGTAAGTGAAGCATTTGATTTTGTACACCCACCATTTTATGTTGACTGATGTATAATGTGTGCGTGTCTCTATTGGTCACATGTAGAAAGAGTGCAATGAAAGAAAAAATTCCTTCCAAAATATACACATATATTTTTTATAGTACGTGCAACAAAATTACAAATATATTTATAATGCAACAAGTAAATGGGAGATATCTCTTCTATTTTTGACATAGGACTTTaactttgagtgttttttgcTTTCATTGACAGGCTAGCACTATCTCAAAAGGGGTGTCACAGTTGAATGTATTTTGTATGGAATGAATGTAATGTGATTATAAATAAGGTAATAGAATGGAAGTAAAAGACTGCGATTCCAAATAAACATGCAATCTGAAATAAATGTTGTATGGTAGTAAAAATA
>XM_036979877.1
ctctctctctctctctctctctctctctctcattctctttttctctcttcctgtctttctctccctctgttctttcTCTGTGAAGTGGTAACCCCCACAGGACCACGGCAGAGCGCTAGCTGAAAGTAATTAGTGCTTTCAAAGTGACACTGCTCCACTTCATCCACAACTCCTATGTGCCACAGTACTCCACCACCCCCACCGCCACCTCATCACACTCCAGGCCCCTGTCATGTTCTCGTCAAGAGCAGCCACACCCAACCCGCTCCCCACCATTCACACAAGGCGAAGTACATCGGCTGCTATATCGACGACACAGCAAAAAGAGCACTTAGGGGAGTGTCCTTTTTCGACTACAAGAAAATGACGGTCTTCCGTTGCCAGGACAACTGTGCTGAAAGGGGATACCTGTATTCAGGCCTAGAGTTTGGGGCGGAGTGCTACTGTGGCCACAAGATCCAGGCCCCCAATGCCTCTGAGAGTGAATGCATCATGCAGTGTAAGGGCGACAAGGGCAACCTGTGTGGAGGGGCCAATCGCCTGTCCATCTACAGACTGGAGCTGAGCCAGGAGTCAGCGCGCCACTATGGGAGTGCCATCTTTAAGGGGTGCTTCCACAGGCCTGACAACGTCACCCTGGCCCTGCCCATCAGCGCTGTCATCCAGAACATGTCAGTGGAGAAGTGTGTGGACATGTGTACGGAGAAGGAGCTGTCCCTAGCGGTCCTAGCTGGAGACAGGTGTCTCTGTGGGTTCCCCACCCCCCACTTCTCCCTCCATGAGATGGAGGATGAGGACCTGTGCCTGCACCGCTGCCATGGCGAGGAGTTTGAGAGCTGTGGGAATGACGAGTACTTTGTGGTGTACCAGACACAGGTCCAAGATAACCGCTGCATGGACCGGCGCTTCCTGCCCACGCGTTCCAAGCAGCTGATTGCTCTGGCCAGCTTCCCCGGGGCTGGCAACACCTGGGCCCGCCACCTCATAGAGCTGGCCACCGGCTTCTACACAGGCAGCTACTACTTTGATGGCTCCCTCTACAACAAAGGCTTCAAAGGTGAGCGAGACCATTGGCGGAGTGGTAGGACCATCTGCATTAAAACACATGAGAGTGGCAAGAAGGAGATTGAAGCCTTTGACGCCAGCATCGTCATGATCCGCAACCCTTACAAAGCCCTCATGGCTGAGTTCAACCGCAAGTACGGCGGCCATATTGGATTCGCCTCTCAGGCCCACTGGAGAGGGAAAGAGTGGCCTGAGTTTGTGAAGAACTATGCTCCTTGGTGGGCGTCCCACACACTGGATTGGCTGCGTTATGGGAGGAATGTCCATGTGGTCCACTTTGAGGAGCTGAAGAGGGAGCTGTTCTCTAAGCTCAAGGACATGGTCCTGTTTCTGGACCTGGAGGTGGCCgaggaacgcctactctgtgtaGAGGGACAGAAGGACGGTAAATTCAAGCGCTCCGGCCTGCGTAAACTGGATTATGACCCGTACACACCTGAGATGCGCACTAGCATTGACGAACTGGTCATGACTGTGGACGCTTCCCTAAAGAAGAGGAACATGGCCGGGGTGCCGAAGGAGTACCGACCCACTCTGAGATAatatctcctctcctttccctctctctctctctccatttctcactCTGTTCTTCTATCCCTTCCCTTCGTTCTAGGATTAATTCATGCCATCCATGTCCAAATGGCTTCAAATATAAAAGTCACATGAACTGAAAATCTATGTGTAGGAAATACGTTTTTATTTAATATACTTCTCTGTTCCCCACcacttctctgtctccttctttcTCACATCCCTTTCCTTTATTTGTTTGACTGACAGGCACACAACCGTATTGATTAGGAGAACAAATACTCTTTCATGAAATGGTTTGAAATGTCACAAAACCTTTTAATGATCTGTCATTTTCaactaaatgttttgttttgttagataTGAAAAATCTATACCTCAACTTGCTGAATACAGTATGTTTGAGAGCCACTATATTTAAAATTAGGAGGTGGTCAAAACCGTACTATTGGACTTGGATTTGGTTGGCGAAAACCCCTGTGTCCATCTATAGGAGGTAATGAATGGGACTGAACACTCATCTCTCCGTCTACCCCTGTGGACACACCATGAGGCTAGATCTTCACTCTTCTCCTCATACTTCAGCAGTATTCTAACAAGAAGAGGTAATACAGCACTATCAAACAGCTGCTCTGCTTCTCTGAAGCAGTGGCCTCTCTTAAAACTGTGCTGCATCAGTCCTACTGAGTCATTACATCTGTGCATTACAGCTgtccttttggttactggcaacagctctggaacACTAAATAATTAACTCTACATAGTTTATTTTGACCATCAGGCTCTATGGAACACTCCTGACTCTTGTCAAGACAGCCCTTTCAATAACTAGCCTCGACTCATCGACAGCTTGTTCGTCCTTGGTCTCCTCAGATGTGGTCAGCCAGACACACTGCGCATGATACATttattgtggatttattgaaTGGAGTTTTCTGCAAACAGCGCTATTTTGAAACTACCACTTCTGCTAAATCACTCTGCAGAACTTGTTGCTTTCCTTATAATGGTGGTTTGAAGCAAAATTACAATGTGGTGCCTTTTCTGTCAGCTAACTGTTGGCTTTAAGTTGAAATGTAGGGAAAATAAAATGATTACTAATATCAAATATTATTGGTAATGTGAATACATTATTGATGATATTTGATGTTAAACTGTCCGCTTAATGCATCATCAGACACACTAGTGTCGAGCTTATGAAACAAAATACCAAGGATGTTGTTATGCAATTATTGCAAATATTGTGTCAGTGCAATGCACTGATCGAATGTTTGAGATTTCCATTTGGCTCATAACTTAATACAGGCTGGGAAGAGGCAGGGTTAACAATCAATAATTGTATGCCACCTCACTGTGTGGCTGAGGCACGTTAGATCAGTATTGTGGAGTTATCAAGCATACCCTGATAGTTTAACACTTCAAATTATACATTTGTATGGGGGGGCAGTCAAATTTGCCTGCCTATAATGACTCAAACACACCAAAATCAATCAAAATGAACATTGTGTCTCTGTTTGAGTGACTTCATAACTAAGAGATAATCATATTTGTCTTCATAATAAGATAATAATATTTGTCTTCATAATAAGATAATATTTGTCTTCATTTATTTAACTTGAATATGATCCAAAAagtgtttcactgtaaggttaaTACAGCTGTAGCATGTACTGTAGCTGCACGCTTACTACCCCAAAGGCCCAAAAGGCATTTATTCAAGTTATAGATGATATGAGATGAGAGTTTTCCCCTCAATGCTTTTTTTTCTTGATATACGATCCCTGATCATTTTTGTTGAAGGTGAGTAGTAATGCTGAAAGTGACGCACCCCATTTTCTCGATTGCTTTGGTATCGCAAAACAAGCTACATGTACAGGTATATAATAGTCCCAGCCATAGGTAATGTGCAACAGAGAATAGAAAGCTAATATACATCAAAATAATCTGTAAGTGAAGCATTTGATTTTGTACACCCACCATTTTATGTTGACTGATGTATAATGTGTGCGTGTCTCTATTGGTCACATGTAGAAAGAGTGCAATGAAAGAAAAAATTCCTTCCAAAATATACACATATATTTTTTATAGTACGTGCAACAAAATTACAAATATATTTATAATGCAACAAGTAAATGGGAGATATCTCTTCTATTTTTGACATAGGACTTTaactttgagtgttttttgcTTTCATTGACAGGCTAGCACTATCTCAAAAGGGGTGTCACAGTTGAATGTATTTTGTATGGAATGAATGTAATGTGATTATAAATAAGGTAATAGAATGGAAGTAAAAGACTGCGATTCCAAATAAACATGCAATCTGAAATAAATGTTGTATGGTAGTAAAAATA

Function

NR:

description
PREDICTED: WSC domain-containing protein 2-like isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979876.1 False 5105 mRNA 0.46 9 31215076 31305586
XM_036979877.1 True 3956 mRNA 0.44 8 31275889 31305586

Neighbor

gene id symbol gene type direction distance location
LOC110525731 LOC106584982 coding upstream 64889 31099067 ~ 31150187 (+)
LOC110525729 p3ip1 coding upstream 177148 31025781 ~ 31037928 (+)
si:ch211-225b11.4 LOC106584980 coding upstream 192552 31006547 ~ 31022524 (+)
LOC110525716 LOC106585257 coding upstream 655280 30552561 ~ 30559796 (+)
4ebp2 LOC106585258 coding upstream 691694 30517976 ~ 30523383 (+)
LOC110525738 ficd coding downstream 101418 31407004 ~ 31428582 (+)
LOC110525744 LOC105025588 coding downstream 339117 31644703 ~ 31654452 (+)
LOC110525750 NA coding downstream 350752 31656338 ~ 31660186 (+)
LOC110526885 LOC106584996 coding downstream 354647 31660233 ~ 31671928 (+)
zgc:158398 LOC106585000 coding downstream 369752 31675338 ~ 31683982 (+)
G495911 NA non-coding upstream 3836 31210982 ~ 31211240 (+)
G495910 NA non-coding upstream 4147 31210713 ~ 31210929 (+)
G495382 NA non-coding upstream 116949 31097881 ~ 31098127 (+)
G495381 NA non-coding upstream 118008 31096727 ~ 31097068 (+)
G495345 NA non-coding upstream 179101 31034150 ~ 31035975 (+)
G495976 NA non-coding downstream 14858 31320444 ~ 31321010 (+)
G495978 NA non-coding downstream 16345 31321931 ~ 31322161 (+)
G495981 NA non-coding downstream 20748 31326334 ~ 31326753 (+)
G495995 NA non-coding downstream 32632 31338218 ~ 31342976 (+)
G496024 NA non-coding downstream 95094 31400680 ~ 31409129 (+)
G495132 NA other upstream 482186 30732352 ~ 30732890 (+)
G495076 LOC106585256 other upstream 638320 30576105 ~ 30576756 (+)
G494943 NA other upstream 778391 30435962 ~ 30436685 (+)
polk polk other downstream 1622332 32926258 ~ 32936958 (+)
LOC110525799 LOC106585046 other downstream 1840881 33135282 ~ 33165186 (+)
c6h22orf39 cssa24h22orf39 other downstream 2012051 33317578 ~ 33320353 (+)
LOC110525816 LOC106585060 other downstream 2156049 33447246 ~ 33465055 (+)
G499111 NA other downstream 2845554 34151140 ~ 34151737 (+)

Expression


Co-expression Network