LOC110525735 (LOC106584987)


Basic Information

Item Value
gene id LOC110525735
gene name LOC106584987
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31310900 ~ 31315063 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606133.2
TTTGGAAAACTGCACAGTCAGCCAGTGCTGTTGTATTGGTCAAAAACGGAGAGGAGTGCTAGGATATCACAAGTGACAATCAATTGAGAAGCACCACTGGACAGTGACATGTCAGCACCATCAATTGGTCTGTAAGGGATTGCAAGCCAAATAACTGCAACACAATGGAGGATTATACATATGAATATGATTATAGCAATTACACCTATGACAATGTTACTCCTCCCGAGGATTTAGATTTCAAAACTCACAAGACATGCTTCACAGAAGTTTCATGCGCCTCCCTCCTGGTGGTCAATGTAGTTATCTTCCTGCTGGGGGTTTGTGGGAATGGGGTGGTCATCTGGATCGCTGGTCTCAAGATGAAGAAGACAATCAACACCACCTGGTACCTCAGCCTGGCCGTCTCCGACTTCATATTCTGTGCCTGTCTCCCCTTCAACATCATCAACACGGTGACAAAAGACTGGATCTTTGGGCTCTTCATGTGCAAGTTCACCTCTTTTGTGATGTTCCTCAACATGTTCTGCAGCATCTTCCTCCTGGTCATCATCAGTGTTGACCGCTGTGTGTCAGTGATGTTTCCAGTGTGGGCTCAGAACCACCGCACCATGGGCAAGGCCTCTGTAGTGGTGGTTCTGGCCTGGGTTGCCTCTGTCGCCCTCAGCATCCCCTCCATAGTGTTCAGAGACGTCAAAACCCATTTAGGGATGAGAAAGTGTTTCAATAACTACAGAGACCAACACAGCCACAAGATGATTGCAGTGAGTCGGTTCATTGGTGGGTTTGTGCTGCCATTCTTTATCATCATCTTTTGTTACTCTGTCATCATCCTGCGACTGAGAACCAACCGAATGATGAGCAAGTCCTCCAAGCCCTTCAAAGTTATGACTGCCCTGATAGCCACATTCTTCATCTGCTGGCTGCCTTACCATGTCTTTGTACTGCTTGAGCTGAACCACCAAAGCTACGACCTGGAGATTATAAGAGCTGGGCTTATGGTGGGCACTACTGTAGCCATAGCTAACAGTTTCCTCAACCCAATGCTGTATGTTTTCATGGGCAATGACTTCCTGCAGAAATTCAAGAGCTCCATACTGTCTAAGATGGCGAATGCCATCGGAGAGGAGGGCCGCACCACCAGCCGCTACCTCTCCAGGTCCAGCTCCATGGAGGGCAGCCGCAGAACCTCCACACACATCTAAATCTCTATGATGATGGTAAGGCCTCAGTGGCTGCAGACGCTTTGTCTTGTAGAAATGTCATGTAAGGTGTATTTTCACTTTATGATCTAATGGACTAGTTATATTTGTCATATATTTGTATAATCACAAGTAGTGCCCTTTGTCTCATGTTAAAACATCTATCTGTTTGATATGTTTCTCCCATGAGCTCCAGTATATTTTCCTACCGTAACTTTTTCCAACCAATTTGAATGTCATTATCTCACATACAGAATGCGATGGAGGCCTTGCTGTGGAGTGATCTTTTGTAGTGATGTGACCTAACATAGGGTTATAACCTATTTACTAGACATATTGAAATAACAACCTAATAACCTAATAATTATAACctctgtataatgtgtgtataatgtgtgtccCTGTAGATGTTAATCTTACAAGCAGAAGTCCATTTGTTTCAGTGAGTGACCAAGCTCAAAGTTCAACGACATCAGTGAAAACAGGAAATGCTCCTGTTTGACAGCCATGTCTCTTGAGGGGAAATGTTTTTTGTGGGGAAATCATTGTGACCTCTTTGTGGTAATTTGTGTAAATTAAGCTGAAACAtatccctaccgctgaaaaaaaAGCTACCTTCTAAAAGGAAATGAACGTCACACTGCTTACAGTACGAAGAGCAGAAATACTATTCACACACTTTGAAGTGTACACTGGGTGTACATAACAatatgaacaccttcctaatatttgacatcagaacagcctcaattcgtctgggcatggactccagaaggtgtcgaaagcattccacatggacgctggcctatgttgactccaatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606133.2 True 2025 mRNA 0.44 2 31310900 31315063

Neighbor

gene id symbol gene type direction distance location
LOC110525732 LOC106584984 coding downstream 4502 31305607 ~ 31306398 (-)
LOC110525730 LOC106584981 coding downstream 215010 31058538 ~ 31095890 (-)
LOC110525727 LOC106584979 coding downstream 310497 30966155 ~ 31000403 (-)
dnah10 dnah10 coding downstream 344825 30905997 ~ 30966075 (-)
LOC110525725 LOC106584977 coding downstream 405089 30831347 ~ 30905811 (-)
LOC110525734 LOC106584947 coding upstream 151 31315214 ~ 31320162 (-)
LOC110525736 LOC106584988 coding upstream 113597 31428660 ~ 31445370 (-)
tmem119a LOC106584989 coding upstream 142979 31458042 ~ 31464600 (-)
LOC110525740 LOC106584990 coding upstream 150770 31465833 ~ 31539790 (-)
ssh1a LOC106584991 coding upstream 230080 31545143 ~ 31607759 (-)
G496590 LOC106584983 non-coding downstream 5481 31302885 ~ 31305419 (-)
G495908 NA non-coding downstream 101001 31209623 ~ 31209899 (-)
G495879 NA non-coding downstream 126195 31184438 ~ 31184705 (-)
G495831 NA non-coding downstream 186475 31108909 ~ 31124425 (-)
G495825 LOC106584982 non-coding downstream 211090 31099107 ~ 31099810 (-)
G496595 NA non-coding upstream 6400 31321463 ~ 31321662 (-)
G496609 NA non-coding upstream 31856 31346919 ~ 31360911 (-)
G496614 NA non-coding upstream 40134 31355197 ~ 31355990 (-)
G496620 NA non-coding upstream 46964 31362027 ~ 31362255 (-)
G496623 NA non-coding upstream 51459 31366522 ~ 31366759 (-)
G495560 NA other downstream 735327 30575118 ~ 30575573 (-)
G495554 NA other downstream 761450 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 783354 30526034 ~ 30527686 (-)
G494542 NA other downstream 1635327 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 1807509 29502192 ~ 29520980 (-)
G496772 NA other upstream 346330 31661393 ~ 31661618 (-)
G496777 NA other upstream 355915 31670978 ~ 31671927 (-)
G496851 NA other upstream 528400 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 1364979 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 2012444 33327507 ~ 33330504 (-)

Expression


Co-expression Network