LOC110525734 (LOC106584947)


Basic Information

Item Value
gene id LOC110525734
gene name LOC106584947
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31315214 ~ 31320162 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606132.2
TAACAACACATTCCTATGCTATTTGGAAGCTTTTTTTCTCAACGTAATATTCTAAATCTTTTTCATAAGggtaaaaaaacaacagaaatcatGGATGCCTCACACAACACATCAGTCTATGATGACTACGATGATTCAGTGGTAATACCTTCCCAGTCCCCAGTCATCTATGAGATGTATCAGATGAAGGCTGGCTTTAGACACATGTATGTGTTAGTGTACTCAGCCAACATTCTGATGGGTCTGCTGCTCAACTCTGCTGTCATCTTCAGGACTGTAAAATGCAGGTCCAAGAAGAAACTGAGTCAACAGATGTTAATCATTGGCTTGGCTGTCACCCACCTCGTCTTCTGCCTCTTCGCCCCACTTTACCTGATCACTGCCTGGAACTACTTCTCCTGGACATTTGGGAAGGTTGTCTGCAAGCTGGGGTCCTACGTGATGTTTATGAACATGTTTTCTGTCTCACTGATGATCACCTTCTGGAATGTGTGCTGGAGTGTCCCTAGATGCTTTGAACACCGCATGTCCACCAACATGGTCCTGCTGTCCTGGTTCACTGGGGCCATACTGAGTACCCCCTCTCTACTGTCCAGGGAGGTTCAGTACACTGCCGATGGACATGTCTGCATTGACGACTATGGCTATACTGGAAGCTCCCAGATGTCtaaagagggaagggagagaatgATGACAGTGTTGATCTGTCGCTTCATTGTCGGGATGCTGCTCCCTTTGGGTGCGAGATGTGTCAGTTGTTGCTGCATGAACAGCATGGGAAACAACCAGCTGAGGCCACGGGTTATTCGACCTGTGACTATTGCCCATTTCCTATGCTGGACTCCTGTCATTAGTCTCTCTGTGCTGCAAGTCACAATGGGGACAGGCAGCAGGTTGTTCACATACGCATTGCCCCCGGCCACTGCCCTGTCAGTCTTAAACAGCTGCATCTCTCCTATCATCTGCATATGGCAGGAGAAGAAGGAACAGAGCCTGAGAGGACCCCCTCGGGTGGAGGACAACAGAGATGAGGATGAGGACATGACATCCCTGACACGCTAACCATAAGGAGGATAATATCCTTAAGCAGTAATGGGAAAACAACATACTGTAAACACCATTTGCAATTTATGAACAGCTTGAAATGTAGTTAGAAATAGTGATATCATGCaaaatcaaaaatatttttttatgaattgTAATAAATACTTTATAAAATTGTCTTGTTAACAACTCACTGTATGTATAATTAATTACACATTGTACATAAAGACCTCTTGAGGTCATACATTACTTCTTGTTTTTAACCTGTGTTTATTTTCAATTCAAATGCTTGCCAAGTAAAGATTTGATGAAACACATAACTATTAACAT

Function

NR:

description
chemokine-like receptor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606132.2 True 1374 mRNA 0.43 3 31315214 31320162

Neighbor

gene id symbol gene type direction distance location
LOC110525735 LOC106584987 coding downstream 151 31310900 ~ 31315063 (-)
LOC110525732 LOC106584984 coding downstream 8816 31305607 ~ 31306398 (-)
LOC110525730 LOC106584981 coding downstream 219324 31058538 ~ 31095890 (-)
LOC110525727 LOC106584979 coding downstream 314811 30966155 ~ 31000403 (-)
dnah10 dnah10 coding downstream 349139 30905997 ~ 30966075 (-)
LOC110525736 LOC106584988 coding upstream 108498 31428660 ~ 31445370 (-)
tmem119a LOC106584989 coding upstream 137880 31458042 ~ 31464600 (-)
LOC110525740 LOC106584990 coding upstream 145671 31465833 ~ 31539790 (-)
ssh1a LOC106584991 coding upstream 224981 31545143 ~ 31607759 (-)
LOC110525743 LOC106584993 coding upstream 296485 31616647 ~ 31631197 (-)
G496590 LOC106584983 non-coding downstream 9795 31302885 ~ 31305419 (-)
G495908 NA non-coding downstream 105315 31209623 ~ 31209899 (-)
G495879 NA non-coding downstream 130509 31184438 ~ 31184705 (-)
G495831 NA non-coding downstream 190789 31108909 ~ 31124425 (-)
G495825 LOC106584982 non-coding downstream 215404 31099107 ~ 31099810 (-)
G496595 NA non-coding upstream 1301 31321463 ~ 31321662 (-)
G496609 NA non-coding upstream 26757 31346919 ~ 31360911 (-)
G496614 NA non-coding upstream 35035 31355197 ~ 31355990 (-)
G496620 NA non-coding upstream 41865 31362027 ~ 31362255 (-)
G496623 NA non-coding upstream 46360 31366522 ~ 31366759 (-)
G495560 NA other downstream 739641 30575118 ~ 30575573 (-)
G495554 NA other downstream 765764 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 787668 30526034 ~ 30527686 (-)
G494542 NA other downstream 1639641 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 1811823 29502192 ~ 29520980 (-)
G496772 NA other upstream 341231 31661393 ~ 31661618 (-)
G496777 NA other upstream 350816 31670978 ~ 31671927 (-)
G496851 NA other upstream 523301 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 1359880 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 2007345 33327507 ~ 33330504 (-)

Expression


Co-expression Network