tmem119a (LOC106584989)


Basic Information

Item Value
gene id tmem119a
gene name LOC106584989
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31458042 ~ 31464600 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606139.2
GACGGGGACAACCTCACTCTCAACAGCTCCATCCCAGACCTTGACAGAGGCTTGTAACACTAGTCAAACTCACAATATATACCACACTAGAGCTTTGAGTCTGTCAACTACATAGCAAATGTTTTGTTCTCATACAGAAAAAGCATTAACTTTCAGCATTACTCTTGAGAAATACAAATCTATCACTATGGCCAAGCAAGTGTACACCTGACCTTCCCTGTACTTACTGAACAAAACCTTCAGAAAATAAATCAATAGGGGGAGAAAAAAATATCTGTTGAACTGAGTTGTTCAACCTATGATTTAAAATCTTCTTATGGCAAGGCTGGACCACGAGGTGCTCCAAACAGGCGTGGGCAGAACAAAAGCCCTGCAGCGCCAGCAGGGATGTGAGAACTGAGGTATGTGTTTATAGCAGACCATAAAATTTATATGTTAGATTTGTATGTGTGATATGATGAAAGACGGGCCCTGTGCCTGTGAGCTGGTCCTGTAGGCCGTGTGGAGACGGGCTGTAATCTGGAGCACGTAATTAGAGGATTCCGTGGGAGGCAGAGAAACCTAGGGACTCGCCCTGTGGAGAACTAAAATACCCACTAACCTTCAAAATGTACAAAGAATAAGTGTTATTTTCCATTTTAGAGAATACTGATTCAACTACGAGTGAAGGTAAGGTGTTTTATTTTCATCTTTGATAATAAAGTCCCTCACATATTGCACTGCACTAACATCTACAACACCAGAGCAGAATTTTGTATTTGACCTCATTGCGCAACTTTCAAGATTGCCACATGAACCAGTGAATCAGGGATTGTGAATAATTAGAAGAATATATTAGTAGTGGACAAAGATGTCCCAGTCCCCCTCATCAATATCTCCCATCATATGTAATGTTTAGGAGCAGGCAAGGAAAATATATTCAGTATGGCAGCCCCTAACTGTCCCCCCTCTCTAGACTGACCAAAGCATCCACCAAAGTATGTGAGCATCCACCAATGTCCCTCTGCAAGGAGAGGAGGATTTGGGGGAGGTAGCAGGAGAAGATGGAAATGTAGAGGGATGGACATCTTTCTGCAATCAGCAGGCTTTGTTTTTTTACAATTGGAGAAATAACTTTCAGTATACTTCAAGTTATAGGAGAAGGGTGGAAACTTGgaagctctctctttctccctcaatttccttctctgctctctctctctctctctcttgcactccctctccccttctctgctGTTAGAATCCCAGTACCATTCAGTCCAGAGGAGACACCAGCCAGACATACAATCTGATTCTGAAGGAAAGATGAGGCACCACTTGATTCTTCACCTGTCATGCGTGAGTCTGGTTATGCTCTGGGGCCATGGCTGTGCCAGGCATGTGCCAATGGTCTACAGCATTTCCATGGATGGCAGTGGTGACGTAGGGGAGACGGATCTTATATTCCCCGTTGATAGCCCCCACCACCCTGTCTCCCCCACCGTCGATGTGTCCCCCACCGTCGATGTCAGCCCCGTTgatgtctcccctgtctcccccaccACTACCCTAGCCCCCACCCTGGTCAGCACCatcaccaacaccatcaccaccaccatgatCCGCCTTAAGGACTTTATGGTCACCCGGGTGGTGGACTTCCTCCAGGATAATATGCTGATCATCATCGTGGTCACCTCCCTCCTCATTGTCATGATCTTCATCATCTGCTGTGCCGCTACCATGAGCCAAAAGCGCAAgttggaggcctacaaacctcctGCCAACTCACCCAGCAAGTATATGGACCACACGGCAGAAGGAGTCAAATCCTCCAGTGAGGTCCAGAGTAGGGTGTGCGGCGGGCCTGACTCAGCCAGGAGGGTCCAGATCCAGGGAACCCCCAAGAATCTACGCACCCCTTCTGTTGCGCTGGTGGGGGAAAAGGTGGGCAAGGAGCCCAAACCGAAGGAGGTCCAGAAAGTGAACGatgtagaggagaaggagacgcGGAGGGTGGAGCCTAAGCACAAAGGGCAGAAGGCTGAGGAggtgcagcaatgttccagctcCAGCACCAGCCAGCCTATGGTCTGCACCTGCCACCTGAGGAAGGCCAACCACTAAGTATAGGTTGGGGCTCCAACCATGTAAACTAGCAAAAAAAAGGAGACAGAAACCTTTTCTTGTGCGGAGGGAACTCCCTGGGTACGTCCGCTGCTGTGTGCCAAACTTGTATGTGGAATCTGACCTTGTGGATACCTTTTAGCATACAGATACTGTACAATTAGGTCTAAAGAGCATACAATCAGGCCTTAAAAACATAAGGAATTTCAGCCCTGACTGTCCTTTTTGATATATCTGATAAATTATTCCTCCTATACTTACCTTGTTGTAGAAAAGTCATTGTGAAATATGAGATTTTGTTCATCAATTGATAGCTTTCAAAGCGACATGTCAAAACATATACCAAGACCGTGCTTATAGGATGTTTGCATGTTATTACTGTTGGGAAATTGTGCTGCTCAGTTAAGCTTAACTAAAAAGATGTAGATCacacagaaaaaaagaaagtTATCTTCTGTGAACGAGAGAAAGCCAAGCGTATTTCTGTTTGCTAACTCTATGGCGATAACCTGGCCAGTTGATTTCAACACAGTAAATGATTGATGTgagaaaatgtattttcttttaGCAATGGACTCCTTTTTTTCTCTTACTTCATTAGAAATGTTACAATTATATACATGTCACATGGGTGCTTTGTGGATTAATATTGAAGAGAATTTGCTCATGCTATATGGATAGACGGTAGAGCTGCTTTTTTTGTATTACATTATCTATTTTTTTCCGAACATCAAAATAACTGTGATTTGCAGGTGCGGGTATGTGGTTACAAAGGTCAGTGCAAGTTTTTATTAAAAATGGACTTACATTACTCAAGTAAATTAAAATCCCCAAATTCTCCTGAGTCCCTTTAAGGATTGTTTTACAGTGACCCTCAGTTCTGCTGTACATTATGGTAATTTTGTTTGCGTAATGGATCTTATTTAATTTTTGTCCAGCTTCAATAGAGATTTTGTTGATATATGTTTTTCTGGAAATTGTAAGTGTAAAAGACAGGCAGTGAGTGTGAGATTTCACCATGTTCATTAAGTGTTTcaaaaacatacacagaacaaaaatctaaacgcaacctctaaagtgttggtcccatgtttcatgagctgaaataaaaaaatccctgaaa

Function

NR:

description
transmembrane protein 119-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606139.2 True 3229 mRNA 0.44 2 31458042 31464600

Neighbor

gene id symbol gene type direction distance location
LOC110525736 LOC106584988 coding downstream 12672 31428660 ~ 31445370 (-)
LOC110525734 LOC106584947 coding downstream 137880 31315214 ~ 31320162 (-)
LOC110525735 LOC106584987 coding downstream 142979 31310900 ~ 31315063 (-)
LOC110525732 LOC106584984 coding downstream 151644 31305607 ~ 31306398 (-)
LOC110525730 LOC106584981 coding downstream 362152 31058538 ~ 31095890 (-)
LOC110525740 LOC106584990 coding upstream 1233 31465833 ~ 31539790 (-)
ssh1a LOC106584991 coding upstream 80543 31545143 ~ 31607759 (-)
LOC110525743 LOC106584993 coding upstream 152047 31616647 ~ 31631197 (-)
ublp ublp coding upstream 170176 31634776 ~ 31635836 (-)
LOC118936268 ublp coding upstream 175621 31640221 ~ 31641551 (-)
G496652 NA non-coding downstream 32876 31424921 ~ 31425166 (-)
G496650 NA non-coding downstream 34136 31423689 ~ 31423906 (-)
G496640 NA non-coding downstream 48927 31400634 ~ 31409115 (-)
G496624 NA non-coding downstream 87555 31370010 ~ 31370487 (-)
G496623 NA non-coding downstream 91283 31366522 ~ 31366759 (-)
G496771 NA non-coding upstream 194880 31659480 ~ 31659947 (-)
G496775 NA non-coding upstream 203433 31668033 ~ 31668357 (-)
G496776 NA non-coding upstream 204654 31669254 ~ 31669636 (-)
G496789 NA non-coding upstream 240064 31704664 ~ 31705045 (-)
G496801 NA non-coding upstream 294547 31759147 ~ 31759455 (-)
G495560 NA other downstream 882469 30575118 ~ 30575573 (-)
G495554 NA other downstream 908592 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 930496 30526034 ~ 30527686 (-)
G494542 NA other downstream 1782469 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 1954651 29502192 ~ 29520980 (-)
G496772 NA other upstream 196793 31661393 ~ 31661618 (-)
G496777 NA other upstream 206378 31670978 ~ 31671927 (-)
G496851 NA other upstream 378863 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 1215442 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 1862907 33327507 ~ 33330504 (-)

Expression


Co-expression Network