LOC118965021


Basic Information

Item Value
gene id LOC118965021
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32014529 ~ 32017379 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118965021
ATGAGTTTCTACGTGACCCTGTTGTCTGGGAACCTGGAAGAGCGCTCCCGGACAGTCCCCCAGTCCCTGTATCATCAGGATGTATTTCTGACCTCAGCTGTGTAACACCCAGCATCACCCTGACTACGTAGAGACAGCCTGTAGTAAGAGTCTAATACACCTGGGACTGGAATACCTGGCCCTCTACCTCATGTACTGGCCCACAGTCTTCCAGCGTGGGACAGAGCTGATGCCCAAGCGGGTCGTTGGCAGTGTGAGTTACGATGACATACGCTACTGGGAAACCAGGGTTGCCATGGAGAACCTGGTTGATAAGGGGCTGGTCCGAGGCATCGGTCTGTCCATCTTcaattaggtgtgtgtgtgtgtacagtatgtttttGTAATGGTGTCTCACTCTTGTGTGTTAGTAGGTGGAGTGTCACCCAGGCCGAGCTGCTGAGTCACtgcaggtaggtgtgtgtgtattctaggACGGTAGGTGTGCGTGACAGCCTACTGTCCCCTGGGTAGTGCTGAGCAGTCCAGGGCTTCACCTGATGAACCCTGCCTGCTGCAGGACCCTGGACTGGGGAGCTGTCACCTCCACCACAGAAAGACCCCTGCTCAGGATATACTCACgtggCAGGTACAGAGAGGGATGGTCTGGATCCCCAAGAGCGTCACTCCTTCCAGGATCCTGCAGAACCTGCAGATGTTTGACTTTTCCTGTCGGATGAACACCTGAAGCAGATCGAGTCGTTCAACAGAAACGAGAGGTACATCATCCCGGCTGTGGAGagggacagagagtggaggGACGCAGACCACCCTCATTTCCCGACCTGATCTAGAGACAGATCCACTGGCCACATCTAGAGTCAGATCTACTGGCCCCACATCTAAAGTCAGTTCTACTGACCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGACCCCACAACTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGACCCCATATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGACCCCATATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAGCTCTACTGGCCCCACATCTAGAGTCAG

Function

NR:

description
PREDICTED: alcohol dehydrogenase [NADP(+)] A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118965021 True 1323 mRNA 0.54 6 32014529 32017379

Neighbor

gene id symbol gene type direction distance location
LOC110525771 LOC106585012 coding upstream 1495 32003116 ~ 32013034 (+)
fancg fancg coding upstream 11870 31995567 ~ 32002659 (+)
LOC110525768 LOC106585010 coding upstream 38123 31955764 ~ 31976406 (+)
tfip11 tfip11 coding upstream 59363 31947139 ~ 31955166 (+)
si:ch211-166a6.5 LOC106585008 coding upstream 69993 31928078 ~ 31944536 (+)
rgmb LOC106585015 coding downstream 171051 32188430 ~ 32201364 (+)
erap2 LOC106585017 coding downstream 193982 32211361 ~ 32224832 (+)
lnpep LOC106585016 coding downstream 214709 32232088 ~ 32250568 (+)
cdk7 cdk7 coding downstream 386032 32403411 ~ 32409712 (+)
serinc5 LOC106585022 coding downstream 397006 32414385 ~ 32469172 (+)
G496354 NA non-coding upstream 22337 31991987 ~ 31992192 (+)
G496309 NA non-coding upstream 68884 31944578 ~ 31945645 (+)
G496198 LOC106585005 non-coding upstream 181660 31828011 ~ 31832869 (+)
G496264 NA non-coding upstream 186834 31825706 ~ 31827695 (+)
G496360 NA non-coding downstream 1606 32018985 ~ 32021387 (+)
G496344 epg5 non-coding downstream 35838 32053217 ~ 32054884 (+)
G496374 NA non-coding downstream 41683 32059062 ~ 32060119 (+)
G496396 NA non-coding downstream 76550 32093929 ~ 32094214 (+)
G496399 NA non-coding downstream 79380 32096759 ~ 32096984 (+)
G495920 LOC106584987 other upstream 701792 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 1003925 31006547 ~ 31022524 (+)
G495132 NA other upstream 1281639 30732352 ~ 30732890 (+)
G495076 LOC106585256 other upstream 1437773 30576105 ~ 30576756 (+)
4ebp2 LOC106585258 other upstream 1491146 30517976 ~ 30523383 (+)
polk polk other downstream 910539 32926258 ~ 32936958 (+)
LOC110525799 LOC106585046 other downstream 1129088 33135282 ~ 33165186 (+)
c6h22orf39 cssa24h22orf39 other downstream 1300258 33317578 ~ 33320353 (+)
LOC110525816 LOC106585060 other downstream 1444256 33447246 ~ 33465055 (+)
G499111 NA other downstream 2133761 34151140 ~ 34151737 (+)

Expression


Co-expression Network