LOC110525023


Basic Information

Item Value
gene id LOC110525023
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32074123 ~ 32080766 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604983.2
gaagaaagaggagcggggaggaggagagaaaaagggggagtTGAGTTAAGGGGAAGTGCAGTCTTTATCCTCTCATTTAAAAAAGTATTGAGTGGAGTTTCGTTTGGAGTAGTTTCCCACTGCTTGCTGCGCTCTCCATGGAACATGGTTTGAACTAGACTGAGCGTGTGTGCAGGAAGACTGAGATTGAAGAGGATGAGCCAAGTTTGGGGTTCTCCATACGATAATACGATGTCACACCTTCTGTCCCCAAGTGACTTCGGTAAAAGCCTCAAGGACTtgAACATTGTGGCCATGTTGCATAACTTTTGGGAGCAGAAGCAGGTGGAACAGGTCAAGGGGTCCGACAGCCAATCAGAGGACTCGGTGAAAGGCTCTGCCAGCCAATCAGAGGGCTTGTTGTTGTATGAGTCTGCCCCTTCCCCAAGACCCCCTTACATCTACTACGTCACTCTGCCTGGAGGAAGCTGCTTTGGAAACTATAAGGAGTGTGAGACCCAGGCGGAAGCTCGTAGGGATGCGGCACGTGTCGCTCTGATGAACTCTCTAGTGAACGAGCTGCCGTCTAGACGAATCACTCCTCTGTTCATCACACACAGCCTGCAGGAGGCTGCTTCAGCCAGCACCGTCTCTGTGGAGGATGCCTGTGATCCTAGCACCAGTTTGGGAGCCTATTGTCTCCTGCTCCAGTCATACACTGGCAGAACCATGTTGGAGTTCCAGgagggGATGACAGTGTTTCAGTTGTTACACTGGAACGGGACGTTGAAGATTCTAAGGGAAAGACAGTGTTCCCGCCAGAATGTGATTGGTTATTACTTGCAGCGGGGACTGGATGCCAGCATGCGCAGCAGCATGGCTCTGGATTGGCTGGGCAGGGAGCGGCAGACGCCAAGGCAGCTGAGGATGGAGCTACGAGCAGCACAGAGGGAACTGGACGTGGCTAGGCGTCATGGCAATGAACTCCGCTTCTACAAGGAGAAAACAGAGATCCTTAGCCTGGCACTGAGTCAAGAATTCACACACCaaccacacacagatatacacggACCACACACAGATTCACAAGAATCGCCTGAACCACACAATCACCACCAATGAgtcgcacatacacacacaaactacatgAACCACCTGAACCACACATAAACTATGAACCATCATCTATCCAGACACAGCATCTGATCCACACATGAAACCCTGAACCACCATACATACACCCAGCTGAATTAGATGAGAACAACAGATGCAGTCTTCATGTACTAGTTGGAACTAGAAAACTCATCCCAACTAGCATGTAAACAGTGGCAAGAGAAAAGAGGTGCTTCATCAAGAGAGACTGAGCAGGTGACTAGGTCAAAGGTCACCATTGACACTGCCAGGCTACCTTCTGTCAAATTCAAGACACAGCTGAGACAGCTGACTGCGGTGTCTTCAATGAGTTTTAAAAGGGAATGCGAAATATTTGTGTACGTTTTAAATAAATACTTTGTCTGTCTGCTATATAATTATAGAACATTTTTCCAAatagttttcattgggaaggcagataaagAGTTTTTTATAAAAAGAAAAGCAATCACTTGTGCGTGTGAAAACACCAAATCCAACTCATTACTCCACGTGCTTAATTacatcacttttgttttgagccgacttGACCTTGGGCTTTGAACAGTGCACCAGGGTGGCTACCTGCACTGAACAATGCACAGTGGTTCGCTATACCAGGGCTATTCATGTCACAGTTAGAGCAGCAatactgtttcctccagcatgttGTTTCAAGACCAAAGCGAAAGTAATATAACGTTTGGGAACACACAAGTTATGTTCTTGATAATCACAGATAGatttaactacactatatatgcaaaagtatgtggacacccattcaaatgagtgaatttggctatttcagccataggcctaccc

Function

NR:

description
protein limb expression 1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604983.2 True 1935 mRNA 0.47 6 32074123 32080766

Neighbor

gene id symbol gene type direction distance location
epg5 epg5 coding downstream 2276 32049187 ~ 32071847 (-)
LOC110517556 dnajb5 coding downstream 40453 32021741 ~ 32033670 (-)
LOC110525767 LOC106584919 coding downstream 89434 31973832 ~ 31984689 (-)
srrd srrd coding downstream 126730 31944549 ~ 31947393 (-)
LOC110525764 LOC106585006 coding downstream 170173 31866928 ~ 31903950 (-)
slc14a2 LOC106585019 coding upstream 179580 32260346 ~ 32274147 (-)
setbp1 setbp1 coding upstream 239729 32320495 ~ 32378525 (-)
thbs4a LOC106585023 coding upstream 388546 32469312 ~ 32482950 (-)
LOC110526888 LOC106585027 coding upstream 427914 32508680 ~ 32520900 (-)
LOC110525784 LOC106585031 coding upstream 599271 32680037 ~ 32682899 (-)
G496932 NA non-coding downstream 49393 32023928 ~ 32024730 (-)
G496920 NA non-coding downstream 78624 31995276 ~ 31995499 (-)
G496919 NA non-coding downstream 79440 31994458 ~ 31994683 (-)
G496801 NA non-coding downstream 314668 31759147 ~ 31759455 (-)
G496789 NA non-coding downstream 369078 31704664 ~ 31705045 (-)
G496950 NA non-coding upstream 2121 32082887 ~ 32083103 (-)
G496956 NA non-coding upstream 12682 32093448 ~ 32093762 (-)
G496957 NA non-coding upstream 13714 32094480 ~ 32094720 (-)
G496960 NA non-coding upstream 16673 32097439 ~ 32097682 (-)
G496964 NA non-coding upstream 19509 32100275 ~ 32100560 (-)
G496851 NA other downstream 181474 31843463 ~ 31892649 (-)
G496777 NA other downstream 402196 31670978 ~ 31671927 (-)
G496772 NA other downstream 412505 31661393 ~ 31661618 (-)
G495560 NA other downstream 1498550 30575118 ~ 30575573 (-)
G495554 NA other downstream 1524673 30545402 ~ 30549450 (-)
G498484 rpl6 other upstream 1246741 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 1251884 33332650 ~ 33336818 (-)
G498960 NA other upstream 1959593 34040359 ~ 34041174 (-)
G501142 NA other upstream 3684600 35765366 ~ 35767929 (-)

Expression


Co-expression Network