Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526888 |
| gene name | LOC106585027 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 32508680 ~ 32520900 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036979929.1 | False | 3535 | mRNA | 0.43 | 5 | 32508680 | 32520900 |
| TU565121 | True | 540 | lncRNA | 0.39 | 2 | 32508687 | 32516502 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| thbs4a | LOC106585023 | coding | downstream | 25730 | 32469312 ~ 32482950 (-) |
| setbp1 | setbp1 | coding | downstream | 130155 | 32320495 ~ 32378525 (-) |
| slc14a2 | LOC106585019 | coding | downstream | 234533 | 32260346 ~ 32274147 (-) |
| LOC110525023 | NA | coding | downstream | 427914 | 32074123 ~ 32080766 (-) |
| epg5 | epg5 | coding | downstream | 436833 | 32049187 ~ 32071847 (-) |
| LOC110525784 | LOC106585031 | coding | upstream | 159137 | 32680037 ~ 32682899 (-) |
| LOC110525785 | LOC106585030 | coding | upstream | 169807 | 32690707 ~ 32730676 (-) |
| LOC110525787 | LOC106585035 | coding | upstream | 229765 | 32750665 ~ 32759951 (-) |
| LOC110525788 | LOC106585037 | coding | upstream | 363025 | 32883925 ~ 32924410 (-) |
| LOC110525792 | LOC106585039 | coding | upstream | 426134 | 32947034 ~ 32962214 (-) |
| G497428 | NA | non-coding | downstream | 97499 | 32410937 ~ 32411181 (-) |
| G497427 | NA | non-coding | downstream | 97785 | 32410590 ~ 32410895 (-) |
| G497116 | NA | non-coding | downstream | 118919 | 32389540 ~ 32389761 (-) |
| G497112 | NA | non-coding | downstream | 120208 | 32388216 ~ 32388472 (-) |
| G497075 | NA | non-coding | downstream | 181714 | 32326682 ~ 32326966 (-) |
| G497518 | NA | non-coding | upstream | 67168 | 32588068 ~ 32612518 (-) |
| G497573 | LOC106585028 | non-coding | upstream | 137342 | 32658242 ~ 32663253 (-) |
| G497663 | NA | non-coding | upstream | 304957 | 32825857 ~ 32826944 (-) |
| G497698 | NA | non-coding | upstream | 406409 | 32927309 ~ 32927532 (-) |
| G497699 | NA | non-coding | upstream | 406693 | 32927593 ~ 32930771 (-) |
| G496851 | NA | other | downstream | 616031 | 31843463 ~ 31892649 (-) |
| G496777 | NA | other | downstream | 836753 | 31670978 ~ 31671927 (-) |
| G496772 | NA | other | downstream | 847062 | 31661393 ~ 31661618 (-) |
| G495560 | NA | other | downstream | 1933107 | 30575118 ~ 30575573 (-) |
| G495554 | NA | other | downstream | 1959230 | 30545402 ~ 30549450 (-) |
| G498484 | rpl6 | other | upstream | 806607 | 33327507 ~ 33330504 (-) |
| LOC110525812 | LOC103397138 | other | upstream | 811750 | 33332650 ~ 33336818 (-) |
| G498960 | NA | other | upstream | 1519459 | 34040359 ~ 34041174 (-) |
| G501142 | NA | other | upstream | 3244466 | 35765366 ~ 35767929 (-) |
