LOC110525781 (LOC106585026)


Basic Information

Item Value
gene id LOC110525781
gene name LOC106585026
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32532765 ~ 32537679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606206.2
TAAACCCAAACACCCAGCCTCTCCAGACTGCATTCAGAGTACGCGAAGTGAAGACAGCCTCGCAATGGAATTACTTAGGAATATCGCTGAACAGCCGACGAATATCAACAGGATGTGCGAGCCCAAACTGCAGGGGTCCTGTGAACTGCGGAGAAAGAGGACGGAGGATCACGGTCTGGCACCTGCGGAGATGGCGAGGATTGTCACGGATCACGCCAGCGGGAAATGTTACTGCCGTGGGAAAGTTCTGGGAAAGGGAGGTTTCGCCAAGTGCTATGAGATGACCGACCTGTCCACGAGTAAAGTTTACGCAGCGAAAATTATTCCCCACACGCGCGTATCCAAACCGCACCAACGGGAAAAGATTGACAGGGAAATCGAGCTACATAGAGTTCTCCACCATAAACACATCGTGCACTTTTACCATCATTTCGAGGACAAAGATAACATCTACATTCTCCTGGAATACTGCAGTAGAAGATCTTTGGCACACATCCTGAAGGCACGCAAAGTGCTCACTGAGCCTGAAGTGCGATACTACCTCCGTCAGATCGTCTCAGGGCTGAAGTACCTACATGAGCAAGAGATCCTGCACAGAGACCTCAAACTGGGTAACTTCTTTGTGAGTGAGTCGATGGAGCTGAAGGTGGGAGACTTTGGGCTGGCTGCCAAGTTGGAGTCTGCTGGGAACAGGAAGAAGACCATCTGTGGGACGCCCAACTACCTGTCCCCTGAGGTTCTCAACAAGCAGGGCCATGGCTGTGAGTCGGACGTCTGGGCCCTGGGCTGTGTCATGTATACCATGCTCCTGGGCAGACCCCCGTTTGAGACCACCAATCTGAAAGAGACGTACAGATGTATTCGGGAGGCGCGTTACTCCCTGCCCTCCTCCCTGTCGCCCCAGGCCAAACAGCTCATCTCCAGCCTCCTGGCCAAGACCCCAGAGGACAGACCTCACCTGGACCACATACTGCGCCATGAATTCTTCACACAGGGTTTTGTGCCAGAGCGTCTCCCTGCTAGTTGTTGCCACTCTGCTCCAGACTTCCACGTCTCCAGCCCTGCCAAGAGCTTCTTCAAGAAGGCAGCGGCCGCCCTCTTCGGCGGGAAAAGAGACAAGGTCAAATACTACGAGACTCTGAATAAACTCACCAAAGAGGAAGAAGAGATCTACAAGCTTCGACATGACCTGAAGAAGACCGTCATCAGCCAGCAGACCAAACAGATTACTGAGGACGGAAGGCCACTGTCACCATCTGCTGGGAGGCCGGTCGCCCCGTCAACCGAGGTCCTGCCCCCGACGACACAAGACCCCATACGGCTTATTGTCAGGGGCAGTCTGGGTagctgcagcagcagtagtgaaTGTCTTGAGGACAGCACCACCGGTAGTGTGGCTGAGACAGTTGCCAGCGTTCTCAGAGGATGCCTGGAAAACATGCCCAAAGcggGTGACCTCCCTAAAGGGATAGAGGGCAGTAACCTGCAGTGGGTCACTAAGTGGGTGGACTACTCCAACAAGTATGGCTTTGGCTACCAGCTCTCCGACCACATAGTGGGAGTTTTGTTCAACAACGGGACACACATGAGCCTCCTCGCAGACAAGAAgacTGTCCACTACTATGCTGAGTTGGGTCAGTGCTCTGTGTTCTCCACCTCTGACATCCCTGAGCGCTTTGTAGGTCAGGTGACCGTCCTCAAGTACTTCGCCCACTAcatggaagagaacctgatggatGGTGGGGACCTGGTGagccaggcagacacacacatgcccaGACTCTACCTGCTGCAGTGGCTCAAGTCTGACCGTGCCCTCATGATGCTCTTCAACGATGGCACATTTCAGGTCAACTTCTACCATGACCACACTAAGATCATCCTGTGCACCCAGAGGGAGGAGTACTTGCTGACATACATCAACGAGGAGCGTGTGTCCTCCACCTTCAGACTGAGCTCCCTGCTCACCTCCGGCTGCCCCGCAGACCTGCGCCAACGCATGGAGTACTCACTCAACATGCTGCTGCAGCGCTTCAACTGAACCAGGAAGAAGTGCAAGGCGAAAGGACAGTGTATGGGGTCAGACCTGTGTAAAGCGATGGACTACTGATTGGTAACCTTTTGCAAATCTATCAGCAGAGGTGCAGCTGAATCTTGATGGACAGACTCTGGAAAGGGCTGATCTGTATGTTGGTAATTGGAAGATAAGAAGACTGGATGTTATGATGAGGGGATGGAGGTACGAATGTGAAACCCATCCGATTTTGAGGAAGATGGAAGTGTGGAAGTGGAAAGGGAACTGGGCTGGGACCAGATAAAGTTGATGTTTTTCTAATCAAAGTAGAACCCTAAGGGCTGATGGATGCTCCAGGTGTAAGTGGAGCTGGACTAGACGACTAATGTACACAGCACTTCTGCATAGCAGAGGCAGGGGTGCCTGTGTTTGTGAAGATACATTAACTTAGACTGTGATTCATTCTCTGAGGATAGATGGACATGGCTGTGTTAGGCTGGGAAGGATGACGTTGATCATACAAGAAGAACCATTACTCTGATAATTAACTTATTGTGTACAAAAGtgcattatttatttaataaataaaaaaacttttACAAATAAA

Function

NR:

description
serine/threonine-protein kinase PLK2-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08861 PLK2; polo-like kinase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606206.2 True 2621 mRNA 0.51 13 32532765 32537679

Neighbor

gene id symbol gene type direction distance location
mtx3 mtx3 coding upstream 24921 32485864 ~ 32507844 (+)
serinc5 LOC106585022 coding upstream 63593 32414385 ~ 32469172 (+)
cdk7 cdk7 coding upstream 123053 32403411 ~ 32409712 (+)
lnpep LOC106585016 coding upstream 282197 32232088 ~ 32250568 (+)
erap2 LOC106585017 coding upstream 307933 32211361 ~ 32224832 (+)
LOC118965022 NA coding downstream 70757 32608436 ~ 32620481 (+)
LOC110525782 LOC106585028 coding downstream 110014 32647693 ~ 32667410 (+)
LOC110526889 NA coding downstream 130018 32667697 ~ 32668444 (+)
LOC118964860 NA coding downstream 137407 32675086 ~ 32684624 (+)
LOC110525789 LOC106585038 coding downstream 234904 32772583 ~ 32883818 (+)
G497153 NA non-coding upstream 67353 32464030 ~ 32465412 (+)
G497146 NA non-coding upstream 88227 32441571 ~ 32444538 (+)
G497117 NA non-coding upstream 141947 32390569 ~ 32390818 (+)
G496505 setbp1 non-coding upstream 206805 32320513 ~ 32325960 (+)
G496500 NA non-coding upstream 226460 32305826 ~ 32306305 (+)
G497253 NA non-coding downstream 116292 32653971 ~ 32713205 (+)
G497402 NA non-coding downstream 400205 32937884 ~ 32938090 (+)
G497740 LOC106585045 non-coding downstream 551288 33088967 ~ 33103783 (+)
LOC110525799 LOC106585046 non-coding downstream 597644 33135282 ~ 33165186 (+)
G497749 NA non-coding downstream 642636 33180315 ~ 33183152 (+)
G495920 LOC106584987 other upstream 1220028 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 1522161 31006547 ~ 31022524 (+)
G495132 NA other upstream 1799875 30732352 ~ 30732890 (+)
G495076 LOC106585256 other upstream 1956009 30576105 ~ 30576756 (+)
4ebp2 LOC106585258 other upstream 2009382 30517976 ~ 30523383 (+)
polk polk other downstream 390239 32926258 ~ 32936958 (+)
c6h22orf39 cssa24h22orf39 other downstream 779958 33317578 ~ 33320353 (+)
LOC110525816 LOC106585060 other downstream 923956 33447246 ~ 33465055 (+)
G499111 NA other downstream 1613461 34151140 ~ 34151737 (+)

Expression


Co-expression Network