polk (polk)


Basic Information

Item Value
gene id polk
gene name polk
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32926258 ~ 32936958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606220.2
GCACTAGAGtcctctatacatctctatggcgACGACAGAAACCTTGGACTCGGCCTGTGGTTGTTAGGTCAGGTGGTAGAGAAAGGAAGATAATTCCTCCATTATCTCTGGTTAGGACATCGCCGCTATGCAGAAACTGTTCAAAATACCTGAAACAGTTTGATATTTCATTGTGTTAATAAATTAATGGATTAATATCACGTTATTCATAAATCAACAACATTTCATCACCTGTTAAAAGTTTGTCGCTGGATTTGTTTCTTGAAGGTTTTGTTTATACGCGCGTTGCGTGGTTTTACATCCGTAAACAAGGAAACTGCACCTCCCCCTAATTGACGTAGAGCGCGGAAGCAAATTCAGAACTCAAGACTGAAGAGGCAAAGGCAAAGAATATACTTTTACcGGTCTCACTTGAAGGAAGTATGGCGACAGGGGGGACCTCCTCTTCCAGTGGGGAGGGCTTCCTCTCAAGAATGGCCCTCAATGACAACAAGGCTGGAATGGAGGGCCTTAACAGGGACAAGATTAACAAGATCATCATGGAGTCCTccaagGGCTCCAGGTTCTATGAGAACGAGCTGAAGAAGGAACAGCAGGTGAACCAGCGCATTGAGAGGATGATGTTGCAGAAAGCACACATCACTGAGCAACAGCTGAGCAAAGCACAAGCACAGGTGGAGAAGATGACCTCTGACCTGGAGAGGGGTCGTGACCTGAGCCGTGTGATTGTGCATGTGGATATGGATGCCTTCTATGCTGCGGTGGAGACGAGAGACTGTCCTGACCTGATGGACAAACCCATGGCCGTGGGCTCCATGAGCATGTTGTCAACATCCAACTACCATGCCAGGAAGTTTGGGGTTCGTGCCGCCATGCCTGGCTTCATCGCAAAGAAGCTCTGCCCAAACCTGGTTATTGTTCCAATCAACTTTGACAAATACAGAGCAGTGAGCGCTGAAGTCCGGGAGGTCTTTGCAGACTATGACCCTCACTTCCTGCCCATGAGTCTCGACGAAGCATACCTGGACATCAGTGACCACCTTGAGCAGAGGAGAGGCTGGCCAGAGGCCCTCCGTACCCACCGTCTCCACACCAACAACACTGGGACAGCTAGAGttgaggACCATGGTGGCctacaggagacagtagagttaGAGGGTTTGTCTCCTGTCCTGTTTGAGAACAGCCCCAGCTCCTCCccctgtctgcaggatgctgctgggggagaggtggaagtGTTTGGGACCTGTGCCGAGGAGGCGGTAAGAGAGATGCGCTTCCGCATCGAGCAGAAGACCTCACTAACAGCCAGCGCAGGCATTGCCCCAAACATGATGCTGGCCAAGGTGTGTAGTGATAAGAACAAACCCAACGGCCAGTACAGACTCCCCTCTAACCGACAGGCTGTCATAGACTTCATACAGGACCTGCCAGTCCGGAAGATCTCAGGCATTGGGAAGGTGACAGAGAAGATGCTGGGAGCTCTAGGTATCACCAGCTGTTCCCATCTTGGCCAGGAGATGGCGCTGCTGGCCCTGCTGTTCTCTGAGACGTCTTGGCATCACTTCCTCCACATCTCCATGGGCCTGGGCTCCACACACATCGAGAGggacggagagagaaaaaGCATGAGTACAGAGAGGACTTTTGGAGAGATGGGTGCATTAGAGGAGCAGTTCTCGCTGTGCAGGGAGCTGTGCCAAGACCTGGCTCAGGACCTGCAGAAGGAGGCGCTCAAGGGCAAGACGGTGACGTTGAAGCTGAAAAATGTCAACTTTGAGGTGAAAACCAGAGCGTGGACGTTGCCGTGTGCTGTTGCTACGACGGAAGAGCTCTTTGCTGTCGCTAAGGACTTGCTGAAGACTGAGATCGACAACGTCAGCCCCCAGCCACTGAGACTGAGGCTTATGGGCGTTCGGGTTTCCAATTTCGCCAGTGCTGATGACAAGAAACCCCTGCAGAAGAGCATTGTGGGATTTCTCCATAAAAAACAGACTGACTCTAGTAGCACCTCCCAGATCTCCTCCCACAAGCCTGTGAAAGAGCATCCACCTAAGTCTCCAGGCCAGACTCAGCCCTCTGCCTGCCCTTCCATGGTACAGCAGAGACAGGGGCAAGAGGGTCACGCCTGGGTACCTAGCcgaggaggggtggaggtgggCGGGACTGGGGAGAACCAGCAATCCTTCTTGCAGAGAGCTCACGCCCAGAGGCTGCGACTGCAAGCTGAGAGAGAGGACCCACCAGAGAAGGGAGATTGTAATGGCTTCGAGACCAGACGGGGCCCAACCTCATCGACCACCACCCCCGaagggacacagacacacactccgaAGAATACAAATACATCAGCAGAGACAGACATCTCTATGAGTGCATTGACAGCTTCGGACAAAATGACACATGAACCTTCAGCCCATGCGTCTACTTCATCATGCTGTTCAACAGAGCCAGAGTCAGGGACAGACAGTCTGACCTGCCCTGTATGCTTCAGGGAGGTGAACACCACAGAGCTGACAGTCTTCAACAGACACGTTGACCAGTGTCTCAGTGGGGTTACTATGGGGCaaaacaaccacacagacacagagctagagagaggccCCCGTGTctgtgaggaggaggtggagaaagagataactggagggaagagggaggaggggccGAAGGAGAAAGGTAGTGAGCTGCTCAGTAGGTGCATGTTGGACTCAGTGGGCCTTCAATTAGACTCAAGTGCAGGTGATCATACGGAGTCCACTACAGGTTTACTTCTATATGAGACGAGTACAGCTAATATTTCACTAAGCACTGTGGGCCTGAACCCTGTCTGCCTTAACACTTGTCCAAATGGAGATGTATCTATACATAGAGCTAACACCCTGAAGGTTTCATCTCAAAGTGACCCTCGTGTTCGGGTTTGTCTGTTGTCCCCCGGTGGCCCTCGGCCAATGACTACGCCCAAGCCCGAGTCACGTGACCACAGAGGCCCCGCCCTCACCTGTCCAGTGTGTCAGGAGACCCAGGACACCAATGACCTCACCCTTTTTAACCGACACGTTGACCTCTGTCTGAACCAGGAAGTCCTGCATGAGCTTGGGGGACTGGCATCTGTGGACCGCACCACCCACACCGCACCACCTGCTGCCCACAAAGAGCGAGAGCAGCCCCTGCAGAGAGGCAAGAGCAAAAGGAGAGGCTtgtctcccccacccccctctaaGAAGGCCAAAGCCCTGGGCCCAGCTTGGAACACTATTGACAAGTTCTTCAGGTGATGCAGCTTAGGTGAATGGAGTGCTGGTGACCTCACTAGCAACCATCCCTACCTACCTAGTACTTCTTGGATTGCTGGGAATTTGGATTGCTTACTCAAGCATTGAAGATACACTTCTTTCAaaagaaatacatttttatctcttgtgcagttttaaaaaaaagtcaTAATGGTCATAAGTTAGCAGGCAGAGCCTTTGCAGGGGTTTTAGTGAAGGTAGTTGATGCAAACCAGTACCAGTATGAGATGGTGTATTTTTGCATAAGATAACTTAAATATAGGctatgtataaaaaataaaaataaaggaaTATTATTGTATTCAAATTTCATAGGCTATTTTTCTTACAGAAAATAAAACTTGCCACCACTGTAAATGTGGCTCAATTAA
>XM_021606221.2
GCACTAGAGtcctctatacatctctatggcgACGACAGAAACCTTGGACTCGGCCTGTGGTTGTTAGGTCAGGTGGTAGAGAAAGGAAGATAATTCCTCCATTATCTCTGGTTAGGACATCGCCGCTATGCAGAAACTGTTCAAAATACCTGAAACAGTTTGATATTTCATTGTGTTAATAAATTAATGGATTAATATCACGTTATTCATAAATCAACAACATTTCATCACCTGTTAAAAGTTTGTCGCTGGATTTGTTTCTTGAAGGTTTTGTTTATACGCGCGTTGCGTGGTTTTACATCCGTAAACAAGGAAACTGCACCTCCCCCTAATTGACGTAGAGCGCGGAAGCAAATTCAGAACTCAAGACTGAAGAGGCAAAGGCAAAGAATATACTTTTACcGGTCTCACTTGAAGGAAGTATGGCGACAGGGGGGACCTCCTCTTCCAGTGGGGAGGGCTTCCTCTCAAGAATGGCCCTCAATGACAACAAGGCTGGAATGGAGGGCCTTAACAGGGACAAGATTAACAAGATCATCATGGAGTCCTccaagGGCTCCAGGTTCTATGAGAACGAGCTGAAGAAGGAACAGCAGGTGAACCAGCGCATTGAGAGGATGATGTTGCAGAAAGCACACATCACTGAGCAACAGCTGAGCAAAGCACAAGCACAGGTGGAGAAGATGACCTCTGACCTGGAGAGGGGTCGTGACCTGAGCCGTGTGATTGTGCATGTGGATATGGATGCCTTCTATGCTGCGGTGGAGACGAGAGACTGTCCTGACCTGATGGACAAACCCATGGCCGTGGGCTCCATGAGCATGTTGTCAACATCCAACTACCATGCCAGGAAGTTTGGGGTTCGTGCCGCCATGCCTGGCTTCATCGCAAAGAAGCTCTGCCCAAACCTGGTTATTGTTCCAATCAACTTTGACAAATACAGAGCAGTGAGCGCTGAAGTCCGGGAGGTCTTTGCAGACTATGACCCTCACTTCCTGCCCATGAGTCTCGACGAAGCATACCTGGACATCAGTGACCACCTTGAGCAGAGGAGAGGCTGGCCAGAGGCCCTCCGTACCCACCGTCTCCACACCAACAACACTGGGACAGCTAGAGttgaggACCATGGTGGCctacaggagacagtagagttaGAGGGTTTGTCTCCTGTCCTGTTTGAGAACAGCCCCAGCTCCTCCccctgtctgcaggatgctgctgggggagaggtggaagtGTTTGGGACCTGTGCCGAGGAGGCGGTAAGAGAGATGCGCTTCCGCATCGAGCAGAAGACCTCACTAACAGCCAGCGCAGGCATTGCCCCAAACATGATGCTGGCCAAGGTGTGTAGTGATAAGAACAAACCCAACGGCCAGTACAGACTCCCCTCTAACCGACAGGCTGTCATAGACTTCATACAGGACCTGCCAGTCCGGAAGATCTCAGGCATTGGGAAGGTGACAGAGAAGATGCTGGGAGCTCTAGGTATCACCAGCTGTTCCCATCTTGGCCAGGAGATGGCGCTGCTGGCCCTGCTGTTCTCTGAGACGTCTTGGCATCACTTCCTCCACATCTCCATGGGCCTGGGCTCCACACACATCGAGAGggacggagagagaaaaaGCATGAGTACAGAGAGGACTTTTGGAGAGATGGGTGCATTAGAGGAGCAGTTCTCGCTGTGCAGGGAGCTGTGCCAAGACCTGGCTCAGGACCTGCAGAAGGAGGCGCTCAAGGGCAAGACGGTGACGTTGAAGCTGAAAAATGTCAACTTTGAGGTGAAAACCAGAGCGTGGACGTTGCCGTGTGCTGTTGCTACGACGGAAGAGCTCTTTGCTGTCGCTAAGGACTTGCTGAAGACTGAGATCGACAACGTCAGCCCCCAGCCACTGAGACTGAGGCTTATGGGCGTTCGGGTTTCCAATTTCGCCAGTGCTGATGACAAGAAACCCCTGCAGAAGAGCATTGTGGGATTTCTCCATAAAAAACAGACTGACTCTAGTAGCACCTCCCAGATCTCCTCCCACAAGCCTGTGAAAGAGCATCCACCTAAGTCTCCAGGCCAGACTCAGCCCTCTGCCTGCCCTTCCATGGTACAGCAGAGACAGGGGCAAGAGGGTCACGCCTGGGTACCTAGCcgaggaggggtggaggtgggCGGGACTGGGGAGAACCAGCAATCCTTCTTGCAGAGAGCTCACGCCCAGAGGCTGCGACTGCAAGCTGAGAGAGAGGACCCACCAGAGAAGGGAGATTGTAATGGCTTCGAGACCAGACGGGGCCCAACCTCATCGACCACCACCCCCGaagggacacagacacacactccgaAGAATACAAATACATCAGCAGAGACAGACATCTCTATGAGTGCATTGACAGCTTCGGACAAAATGACACATGAACCTTCAGCCCATGCGTCTACTTCATCATGCTGTTCAACAGAGCCAGAGTCAGGGACAGACAGTCTGACCTGCCCTGTATGCTTCAGGGAGGTGAACACCACAGAGCTGACAGTCTTCAACAGACACGTTGACCAGTGTCTCAGTGGGGTTACTATGGGGCaaaacaaccacacagacacagagctagagagaggccCCCGTGTctgtgaggaggaggtggagaaagagataactggagggaagagggaggaggggccGAAGGAGAAAGGTAGTGAGCTGCTCAGTAGGTGCATGTTGGACTCAGTGGGCCTTCAATTAGACTCAAGTGCAGGTGATCATACGGAGTCCACTACAGGTTTACTTCTATATGAGACGAGTACAGCTAATATTTCACTAAGCACTGTGGGCCTGAACCCTGTCTGCCTTAACACTTGTCCAAATGGAGATGTATCTATACATAGAGCTAACACCCTGAAGGTTTCATCTCAAAGTGACCCTCGTGTTCGGGTTTGTCTGTTGTCCCCCGGTGGCCCTCGGCCAATGACTACGCCCAAGCCCGAGTCACGTGACCACAGAGGCCCCGCCCTCACCTGTCCAGTGTGTCAGGAGACCCAGGACACCAATGACCTCACCCTTTTTAACCGACACGTTGACCTCTGTCTGAACCAGGAAGTCCTGCATGAGCTTGGGGGACTGGCATCTGTGGACCGCACCACCCACACCGCACCACCTGCTGCCCACAAAGAGCGAGAGCAGCCCCTGCAGAGAGGCAAGAGCAAAAGGAGAGGCTtgtctcccccacccccctctaaGAAGGCCAAAGCCCTGGGCCCAGCTTGGAACACTATTGACAAGTTCTTCAGGTGAATGGAGTGCTGGTGACCTCACTAGCAACCATCCCTACCTACCTAGTACTTCTTGGATTGCTGGGAATTTGGATTGCTTACTCAAGCATTGAAGATACACTTCTTTCAaaagaaatacatttttatctcttgtgcagttttaaaaaaaagtcaTAATGGTCATAAGTTAGCAGGCAGAGCCTTTGCAGGGGTTTTAGTGAAGGTAGTTGATGCAAACCAGTACCAGTATGAGATGGTGTATTTTTGCATAAGATAACTTAAATATAGGctatgtataaaaaataaaaataaaggaaTATTATTGTATTCAAATTTCATAGGCTATTTTTCTTACAGAAAATAAAACTTGCCACCACTGTAAATGTGGCTCAATTAA
>TU565098
CTCTGACCTGGAGAGGGGTCGTGACCTGAGCCGTGTGATTGTGCATGTGGATATGGATGCCTTCTATGCTGCGGTGGAGACGAGAGACTGTCCTGACCTGATGGACAAACCCATGGCCGTGGGCTCCATGAGCATGTTGTCAACATCCAACTACCATGCCAGGAAGTTTGGGGTTCGTGCCGCCATGCCTGGCTTCATCGCAAAGAAGCTCTGCCCAAACCTGGTTATTGTTCCAATCAACTTTGACAAATACAGAGCAGTGAGCGCTGAAGTCCGGGAGGTCTTTGCAGACTATGACCCTCACTTCCTGCCCATGAGTCTCGACGAAGCATACCTGGACATCAGTGACCACCTTGAGCAGAGGAGAGGCTGGCCAGAGGCCCTCCGTACCCACC

Function

symbol description
polk Predicted to enable DNA-directed DNA polymerase activity. Predicted to be involved in error-prone translesion synthesis. Predicted to act upstream of or within DNA biosynthetic process and DNA repair. Predicted to be active in nucleus. Orthologous to human POLK (DNA polymerase kappa).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606220.2 False 3664 mRNA 0.51 16 32926258 32936958
XM_021606221.2 False 3650 mRNA 0.51 16 32926258 32936958
TU565098 True 395 TUCP 0.55 3 32927918 32928851

Neighbor

gene id symbol gene type direction distance location
LOC110525789 LOC106585038 coding upstream 42440 32772583 ~ 32883818 (+)
LOC118964860 NA coding upstream 241634 32675086 ~ 32684624 (+)
LOC110526889 NA coding upstream 257814 32667697 ~ 32668444 (+)
LOC110525782 LOC106585028 coding upstream 258848 32647693 ~ 32667410 (+)
LOC118965022 NA coding upstream 305777 32608436 ~ 32620481 (+)
LOC110525791 LOC106584948 coding downstream 2956 32939914 ~ 32945504 (+)
LOC110525793 NA coding downstream 23862 32960820 ~ 32966080 (+)
sv2ca LOC106585040 coding downstream 32904 32969862 ~ 33004119 (+)
iqgap2 LOC106585041 coding downstream 71233 33008191 ~ 33092742 (+)
LOC110525799 LOC106585046 coding downstream 198324 33135282 ~ 33165186 (+)
G497253 NA non-coding upstream 213053 32653971 ~ 32713205 (+)
G497153 NA non-coding upstream 460846 32464030 ~ 32465412 (+)
G497146 NA non-coding upstream 481720 32441571 ~ 32444538 (+)
G497117 NA non-coding upstream 535440 32390569 ~ 32390818 (+)
G496505 setbp1 non-coding upstream 600298 32320513 ~ 32325960 (+)
G497402 NA non-coding downstream 926 32937884 ~ 32938090 (+)
G497740 LOC106585045 non-coding downstream 152009 33088967 ~ 33103783 (+)
G497749 NA non-coding downstream 243357 33180315 ~ 33183152 (+)
G497849 NA non-coding downstream 256120 33193078 ~ 33197388 (+)
G495920 LOC106584987 other upstream 1613521 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 1915654 31006547 ~ 31022524 (+)
G495132 NA other upstream 2193368 30732352 ~ 30732890 (+)
G495076 LOC106585256 other upstream 2349502 30576105 ~ 30576756 (+)
4ebp2 LOC106585258 other upstream 2402875 30517976 ~ 30523383 (+)
c6h22orf39 cssa24h22orf39 other downstream 380679 33317578 ~ 33320353 (+)
LOC110525816 LOC106585060 other downstream 524677 33447246 ~ 33465055 (+)
G499111 NA other downstream 1214182 34151140 ~ 34151737 (+)
fancc fancc other downstream 6333001 39269915 ~ 39312098 (+)

Expression


Co-expression Network