LOC110525791 (LOC106584948)


Basic Information

Item Value
gene id LOC110525791
gene name LOC106584948
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32939914 ~ 32945504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606222.2
TTCGTATTCCTTATGCAGGACGAGCTTCAGTGAATGCTATATCACCAGTATAAGAGAAAGGTTTACCAGACTGTTGTGTATTTGACAGTGCTGAGTTCTCTTTCAGGTTCCTCAGCATCTGCTCCAGTTCCTGACCAGACTTTCTGCATTAATTCAGTACTTCTACATGGTTGTTTGGCAAGACAAGCATAGAGAAGCAGAGGTGGTATAAAGCAGAGACAGACTGGGATCAAGCCCAGGTTCCAGGGAGAAGTCACCAGATATTCACCATGGAGAAAAGGTCCTTGAAGGAGATACCGTCTctgaaggagaggatgggggCACAGCTGAAGGAACTAAACCTGAACCCTAAAACACTGAAAAACTCAAAAAAAGCAGTGAAGGGATTCACAGACTTTATACAGAACAAGGAGACGGAGGAGACAGACAACAGCTACGATAATAAAGAGATGTtgtTGGCGCTAGAGAAGGAGTACATTGACGCAGCAAAAATAAATGATGTACAGACCATGAAGCTTCTGGGGAAGGCGGTCAATGTCGACGCAAAGAACTTGCATGATCGCACTGCCCTGCACTATGCAGTAGCTGGAAAAAACATAGAGGCCGTCCAAGTACTTCTACAGCGCAGAGCAAATCTCAATCAAGCGGACAAGCATGGAGTGACAGCCATCCACCTGGCTGCCTGGTTTGGGAGTGTAACCATCCTGAAGTTGCTTGTGCAGGGTGGTGCTGACCCAAGTGTTCAGAATGCGTTGGGACTGACCATTATGCACTGTGCTGCcatcaacaaccacactgacatCGTGACGTTCATTATCTACGACTTGATGATGAAAGAACTGGACAAAGAGGACCTGtctGGACACAGGGTGTTTGCGTCGGCAGCAGAGCATGGCTCTGTTGAGATGCTGCAGATGTTGATGGAGGAGGCATACAATATGGCCACCATGGAggaagaccagAATGGGGACACACCTCTGCACTTGGCTGCCAGCAATGGCCATTTGGATGCCGTCCAGCTACTGTTGAAGAGCTTTGATACTCGTGATGAAGTCAATAAGCTTGGGGAGACGGCTCTGTACCTGGCTGCTGACGCTGCCCATGAGGACTGTGTCCAGGCTCTGTTGGAGGCAGGCTGTGACCCAAACATTGTCACCATGGGCCAAAGCAGTGCTCTACACCCTGTCTCAGAGAAGGGTCACACGTCGTTGGTGAAACTCCTCATAGAGAACACGGCCCAGATGGACTTACAAAACCAGCACCTCCAGGCTCCTCTCTACCTGGCAGTGAAGAACTGTCACATCCCTGTCATCCACACACTGCTGGAGGCTGGCTGCAACGTCAACATCACTGATCATAGGTCCCAGACTGTCCTGCATGTAGCAGCAGAGCTGGCCAGAGTGGACATTGTTGACATGCTTCTGAAAGCTGGGATGGACCTGACCCTCCAGGACAAGCAGGGTAAGACAGCACTGGCTGTGGCAGCCCGAGCAGACGAAGTCATCATCGTAGACATGATCATCAAGGCAGAGAGATATTTCACATGGAGGAGGGCCAACACTGAGCTTAATGAGAACCTTCACAGCCAGTCTCCGCTGACGTTTAAATTAGACCATCGCGCGGAGAGCAAACATGTCCGCGGTACGGCCTGGCACCTGGCCTACCGCCTGCTGGAGCCGGGTGACTGGAAGAGGCTGGCGCTGCACTGGCACTTCACCGAGCAGCAGGTGGCTGCCATCGAGGAGCAGTGGACAGGGAAGCGGAGCTACCAGGACCATGGGAACAGGATGCTGTTGATCTGGCTCCATGGGTCAGAGCTGGCCCAGTTGAATCCAGCTAAAGAGCTGTACCAGGGCCTGCTTGCCATAGACAACAAGACCGTAGCAGATAAAATACGAATGGACACAGAGGACGGAGACATGAAGAAATGCATCCTTTCATAAAGGGCGTCGACATCTACAGACATACGTTCAGTCAACCAGATTCTATATTTTCCCAAATGAGAGCATTTGTGCAGTTCTTTTTCAATGGATCCATAGTAGTACACATTTCCATGTAccatcagaagtttacatacacttaggttggagtcattcaaactcgtttttcagcctctctacaaatttcttgttaacaaactatagttttggcaagtcggttaggacatctactttgtgcatga

Function

NR:

description
ankyrin repeat and death domain-containing protein 1B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606222.2 True 2182 mRNA 0.50 15 32939914 32945504

Neighbor

gene id symbol gene type direction distance location
polk polk coding upstream 2956 32926258 ~ 32936958 (+)
LOC110525789 LOC106585038 coding upstream 56096 32772583 ~ 32883818 (+)
LOC118964860 NA coding upstream 255290 32675086 ~ 32684624 (+)
LOC110526889 NA coding upstream 271470 32667697 ~ 32668444 (+)
LOC110525782 LOC106585028 coding upstream 272504 32647693 ~ 32667410 (+)
LOC110525793 NA coding downstream 15316 32960820 ~ 32966080 (+)
sv2ca LOC106585040 coding downstream 24358 32969862 ~ 33004119 (+)
iqgap2 LOC106585041 coding downstream 62687 33008191 ~ 33092742 (+)
LOC110525799 LOC106585046 coding downstream 189778 33135282 ~ 33165186 (+)
LOC110525801 ppc1a coding downstream 228018 33173522 ~ 33177160 (+)
G497402 NA non-coding upstream 1824 32937884 ~ 32938090 (+)
G497253 NA non-coding upstream 226709 32653971 ~ 32713205 (+)
G497153 NA non-coding upstream 474502 32464030 ~ 32465412 (+)
G497146 NA non-coding upstream 495376 32441571 ~ 32444538 (+)
G497117 NA non-coding upstream 549096 32390569 ~ 32390818 (+)
G497740 LOC106585045 non-coding downstream 143463 33088967 ~ 33103783 (+)
G497749 NA non-coding downstream 234811 33180315 ~ 33183152 (+)
G497849 NA non-coding downstream 247574 33193078 ~ 33197388 (+)
G497852 NA non-coding downstream 252638 33198142 ~ 33198539 (+)
G495920 LOC106584987 other upstream 1627177 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 1929310 31006547 ~ 31022524 (+)
G495132 NA other upstream 2207024 30732352 ~ 30732890 (+)
G495076 LOC106585256 other upstream 2363158 30576105 ~ 30576756 (+)
c6h22orf39 cssa24h22orf39 other downstream 372133 33317578 ~ 33320353 (+)
LOC110525816 LOC106585060 other downstream 516131 33447246 ~ 33465055 (+)
G499111 NA other downstream 1205636 34151140 ~ 34151737 (+)
fancc fancc other downstream 6324455 39269915 ~ 39312098 (+)

Expression


Co-expression Network