Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110525792 |
| gene name | LOC106585039 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 32947034 ~ 32962214 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| centrosomal protein POC5 isoform X1 |
| id | description |
|---|---|
| K16483 | POC5; centrosomal protein POC5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021606224.2 | False | 2475 | mRNA | 0.52 | 13 | 32947034 | 32961409 |
| XM_021606223.2 | True | 2576 | mRNA | 0.53 | 13 | 32947034 | 32962214 |
32,936,000
32,938,000
32,940,000
32,942,000
32,944,000
32,946,000
32,948,000
32,950,000
32,952,000
32,954,000
32,956,000
32,958,000
32,960,000
32,962,000
32,964,000
32,966,000
32,968,000
32,970,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525788 | LOC106585037 | coding | downstream | 22624 | 32883925 ~ 32924410 (-) |
| LOC110525787 | LOC106585035 | coding | downstream | 187083 | 32750665 ~ 32759951 (-) |
| LOC110525785 | LOC106585030 | coding | downstream | 216358 | 32690707 ~ 32730676 (-) |
| LOC110525784 | LOC106585031 | coding | downstream | 264135 | 32680037 ~ 32682899 (-) |
| LOC110526888 | LOC106585027 | coding | downstream | 426134 | 32508680 ~ 32520900 (-) |
| LOC110525797 | LOC106585042 | coding | upstream | 111487 | 33073701 ~ 33076106 (-) |
| LOC110525798 | LOC106585045 | coding | upstream | 136852 | 33099066 ~ 33103756 (-) |
| LOC110525800 | ergi2 | coding | upstream | 152482 | 33114696 ~ 33130672 (-) |
| LOC118965074 | NA | coding | upstream | 231056 | 33193270 ~ 33197445 (-) |
| LOC118965075 | NA | coding | upstream | 235952 | 33198166 ~ 33199518 (-) |
| G497708 | NA | non-coding | downstream | 2287 | 32944201 ~ 32944747 (-) |
| G497707 | NA | non-coding | downstream | 4540 | 32942214 ~ 32942494 (-) |
| G497704 | NA | non-coding | downstream | 8720 | 32937884 ~ 32938314 (-) |
| G497699 | NA | non-coding | downstream | 16263 | 32927593 ~ 32930771 (-) |
| G497698 | NA | non-coding | downstream | 19502 | 32927309 ~ 32927532 (-) |
| G498324 | NA | non-coding | upstream | 43221 | 33005435 ~ 33005636 (-) |
| G498334 | NA | non-coding | upstream | 52672 | 33014886 ~ 33023041 (-) |
| G498447 | NA | non-coding | upstream | 226908 | 33189122 ~ 33189398 (-) |
| G498452 | NA | non-coding | upstream | 246882 | 33209096 ~ 33209696 (-) |
| G498489 | NA | non-coding | upstream | 299163 | 33261377 ~ 33331621 (-) |
| G496851 | NA | other | downstream | 1054385 | 31843463 ~ 31892649 (-) |
| G496777 | NA | other | downstream | 1275107 | 31670978 ~ 31671927 (-) |
| G496772 | NA | other | downstream | 1285416 | 31661393 ~ 31661618 (-) |
| G495560 | NA | other | downstream | 2371461 | 30575118 ~ 30575573 (-) |
| G498484 | rpl6 | other | upstream | 365293 | 33327507 ~ 33330504 (-) |
| LOC110525812 | LOC103397138 | other | upstream | 370436 | 33332650 ~ 33336818 (-) |
| G498960 | NA | other | upstream | 1078145 | 34040359 ~ 34041174 (-) |
| G501142 | NA | other | upstream | 2803152 | 35765366 ~ 35767929 (-) |
| hk2 | LOC106585103 | other | upstream | 3545842 | 36507843 ~ 36569143 (-) |
