LOC110525797 (LOC106585042)


Basic Information

Item Value
gene id LOC110525797
gene name LOC106585042
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33073701 ~ 33076106 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606227.2
TTGAACAGTGAATTCCCCACTGACCAAACAGTATATAAATACCTTTAGGACGTGCATAAGATAAGCAAGAACTCATACAAGCACAAACATAACATACAGACCAAAGCTAAATAGGAACTTGTTACCATACTTTCTAACTTGAAAATTGTAGTTCCGATCACATGGAATTAAAATGTGTGTGACTCATGGGGAATACTGAAGGTCAAAGCAGGTTCATGGAAACTGTTCCAGGAAGCTTGGGTTTTGAAATCATCCTACTGTATGTTTGATGTTACCCAAGCTGATAATCTTGTTACTTAGTTTAACCGGAGTTAATCTTTTTACTCTAACATTAGTAATTTTGCATTAGACAAGCCATATTTTCAGTCACAGAAAACTGAAAGACTTGAGAaacctgctcacacacacaaaaaaaaaaaaaactatttgagGAATGACAAACAGTAAACTATTAGGACCGTCTCCTCCCACTCGGCTGAATCAGTAGATAGTGTCTGACGCAGAGCAGGAATTCAGTTTCAAGCctggacaggaaacacacacacagtatacacacaccctATGCACACAGCCTCACGGTCCACTGCTCACACCAGTGTAGAATGGACTTCCAGTACAGTAGCCTGCTTGATCATGTGAACCAGCTATCTGGATGGCTAGTTGATTCTGCTAGTTAATCCTGATAATGAACAACTAGCCTATAGCAAGTCAATAGAAACACTAGTGGACTTTGAGTTATACAGggataataataacaacaatgtgGCGGAGACAGGAGAAAGACCGGACCAATACACTGGCTGGGATTCTCTTCTGTCTGACGGTAGGACTGTCTCTCCAGGACAATGAGGAGAAAGtcaacaagacaaaaacaaccGCCTTAGCTGTGTTGGACCCAAGGACGTTCAATGGCAGGAGAGTTCAGACCAACTGTACGGCTGAGGCTGGGCCCCCCAGCTTGATCCACCTGTCCCCTGGGGCCCCTGGGCTGGATGTGAGGCTGGAGGACCCTGCAGTAGCCTACACCACGGGGCTCCTCAGCACCCGGCTCATCCCCTCAGCCTACCTCCTGGCCATGGCAGTGGGCATCCCCTCCAACGCTTATATCCTGGCCTTCCTGAGGCTCCGGGCCAGGTCTTTCTCCACGGCTGTCCTCTACCTTAGCCTGGCCCTCTCTGACCTACTCCTCCTGCTCTCCCTGGCCCTCCGAGTCCACTACCACCTAAACGGAAACAACTGGGTGTTCGGCGAAGCTGCCTGCCGTGTCGTCACCGCTTGTTTCTATGGCAATGTCTACTGCTCTGCCCACACCATCGCTTGTGTCAGCCTCAAGCGCTACCTGGCCGTGGTGAGGCCCTTCCTGTACAGGCGGCTGCCCAAGACGGCCTGGGCGCTGGGGGCAAGCCTGGGGGTGTGGGGCCTGTTTGGGGTGGCTGTGATGCCTGAGCTCCTGGTGAGACAGAGCTTCCTGCTGCCTCGTCTGGGATTCACCACCTGCCATGACATACTGCCCCTGGAGGACTCCCCCCACGCACTGCTGGTGCCCTACAGGTTGGCACTGGTCTGTTTAGGGTTACTCGTGCCCTTTGTGGTCTGTGCCTGGACCCATGTGGCGGTGGTGCAGCATCTGGGTCGCTCGGGCCTTGACTGGACACCCTTCATCAGGGTCAGTACACTGGTCTTCCTCATCTTCACTGTGTGTTTCGCTCCCAGCGGCGTCCTCCATATCGCCCATTACGTGAGGCTGTCCACCAGTGGAGAGGACGGGCTGTATGTGTACTCCAGCGCTACAGTGTGTCTGTGCTGCTTCCACAGCTGTCTGGACCCCTTCCTGTGTATTCTCATGTCCAGGACAACCGCCTCCAAACTGCGCTTCGCCTCTCTCAGGAGGACACAGCAGACACCTGTTCTGGTGtagagactgtgtgtatgtgcccactgtatttaaaaaatatatatttcagctttatttaaccaggtaagctagttgagaacaagttctcatttacaactgcgacctggccaagataaagcaaagcag

Function

NR:

description
proteinase-activated receptor 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606227.2 True 2041 mRNA 0.51 2 33073701 33076106

Neighbor

gene id symbol gene type direction distance location
LOC110525792 LOC106585039 coding downstream 111487 32947034 ~ 32962214 (-)
LOC110525788 LOC106585037 coding downstream 149291 32883925 ~ 32924410 (-)
LOC110525787 LOC106585035 coding downstream 313750 32750665 ~ 32759951 (-)
LOC110525785 LOC106585030 coding downstream 343025 32690707 ~ 32730676 (-)
LOC110525784 LOC106585031 coding downstream 390802 32680037 ~ 32682899 (-)
LOC110525798 LOC106585045 coding upstream 22960 33099066 ~ 33103756 (-)
LOC110525800 ergi2 coding upstream 38590 33114696 ~ 33130672 (-)
LOC118965074 NA coding upstream 117164 33193270 ~ 33197445 (-)
LOC118965075 NA coding upstream 122060 33198166 ~ 33199518 (-)
LOC110525802 LOC106585047 coding upstream 125311 33201417 ~ 33211246 (-)
G498334 NA non-coding downstream 50660 33014886 ~ 33023041 (-)
G498324 NA non-coding downstream 68065 33005435 ~ 33005636 (-)
G497708 NA non-coding downstream 128954 32944201 ~ 32944747 (-)
G497707 NA non-coding downstream 131207 32942214 ~ 32942494 (-)
G497704 NA non-coding downstream 135387 32937884 ~ 32938314 (-)
G498447 NA non-coding upstream 113016 33189122 ~ 33189398 (-)
G498452 NA non-coding upstream 132990 33209096 ~ 33209696 (-)
G498489 NA non-coding upstream 185271 33261377 ~ 33331621 (-)
G498493 NA non-coding upstream 190427 33266533 ~ 33266855 (-)
G498500 LOC106585050 non-coding upstream 203121 33279227 ~ 33280931 (-)
G496851 NA other downstream 1181052 31843463 ~ 31892649 (-)
G496777 NA other downstream 1401774 31670978 ~ 31671927 (-)
G496772 NA other downstream 1412083 31661393 ~ 31661618 (-)
G495560 NA other downstream 2498128 30575118 ~ 30575573 (-)
G498484 rpl6 other upstream 251401 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 256544 33332650 ~ 33336818 (-)
G498960 NA other upstream 964253 34040359 ~ 34041174 (-)
G501142 NA other upstream 2689260 35765366 ~ 35767929 (-)
hk2 LOC106585103 other upstream 3431950 36507843 ~ 36569143 (-)

Expression


Co-expression Network