LOC110525814 (LOC106585056)


Basic Information

Item Value
gene id LOC110525814
gene name LOC106585056
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33352672 ~ 33367435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979953.1
CAATTACACAATGACCCCGCCCTTTGTGTCATAATGTTTGCGCATGCTCAGTCCGCAACTCTGTGCTTTCTCCTTCACTGTGCCCTATTGCGCGAGACAGAACGTTCTGAAACTTCGCTCATCGCCCCTTAAAATAAGtcacCATGGCTGTTCCTCCTGCATACTCAGACCTGGGAAAATCTGCCAAAGACATCTTCAGCAAGGGCTATGGCTTTGGAATTGTGAAACTGGACCTAAAGACCAAGGCCCAGAGTGGAGTTATGGAGTTTGCGACCTCAGGCTCCAGTAACACAGACACAGGGAAGGCAGCAGGTAACCTGGAGACCAAATATAAGGTGAAGGAGCTGGGCCTGAGCTTCAACCAGAAATGGAACACAGACAACACCCTGACCACCGAGGTCTCCATAGAGGACCAGTTGGCTAAGGGCTTGAAGCTGGCTCTGGACACATCGTTCGTGCCCAACACTGGTAAGAAGAGTGCCAAGCTGAAGACTGGTTACAAGCGGGACTTCATCAACCTGGGCTGTGACCTGGACTTTGACATGGCCGGCCCCACGGTCCATGCTGCTGCCGTGCTGGGCTAtgagggctggctggctgggtaccAGATGGCCTTCGACACAGCCAAGTCCAAACTGTCCCAGAACAACTTTGCCCTGGGATACAAGGCTGGGGACTTCCAGCTCCACACCAATGTTAACGACGGTACAGAGTTCGGTGGCTCCATCTACCAGAAGGTGAACTGCCACTTGGAAACAGCCATCAACCTTGCCTGGACGGCCGGCAGCAACAACACACGCTTTGGCATCGGAGCCAAATACCAGCTGGACAAGGACGCTTCCCTGTCTgCCAAAGTCAACAACGCCAGTCTGATTGGAGTCGGCTACACACAGGTTCTCCGGCCAGgagtgAAGCTGACTCTCTCAGCTCTGATCGATGGGAAGAACTTCAACGCAGGCGGCCACAAGGTTGGCATGGGCTTTGAGCTGGAGGCAtaaggatggaggggagaggagaagagggggatgggTGAAGGAAGGGAAAGATCCCGAATCtgacaaaacacacatacacatacacacgcacagagagagtGTGTCTTTTGGCCTTAACCCTACAGCCCTTAGCACCCTCTGAGACCCCCAGTACTATATTAAAATGGACAGACTGTCGAGAACCAAGTTGTTTTTTGGTTAGCTTTAGGTTCACCATCTCTCTGTATTATCTCCTTAGCAATACCACTACGTAAGGGACATCTGTCATGCCATGGCACTGGAGCAGGCAGCCAGTGAGCAAGTctcaaatgacactctattcacCAGGAGTTTACTAATTcacatagggctctgatcaaaagtggtGTACTGTATGCAGAACAGTGTGTTTGAAACAGACAAGTCTGAAGTCAACCTTTTGTTCCACTTCCTCCCCATAAGCAGACATATCCTCTTTTCTGTGTGTGCACCTTTTTAGTAGGGTTTGATTGTGTGGTATACTTTCCCTTTGCCTGAGATCATGTGTTTAATCTACTTTTGACttgtgacaaaacattttttagattGACAGTGTACTTCGGTTTGTGTATTTGTGGTACACTATTGATTCGATCAAAGCCAGAGGGGAGTTGTTTTCAAGGaataacttattttttaaatgtcatgATGTTCCGTTGTCCCAGACCTTTTACAGGCCTGTTTGTGGAAGGATGTCCACTTTCAGTGATACATAAACAGGGACACATTGACACGAGCATACTGCAATAAAATGGGTGGCTAATAACTTGAAAATGAGACGGGTTGAGTTTCTGTTTCCAAATCAGGGAAATATCTGTAGTACAGAGAACTTGGAAGATTCCACCTTGACAGTAAGATTTGTTGACTGACTTGTATTCCCATTCCAGAACATAAAGCAGTGTAACAATAGCTGAATGTTCTGCCCAGAGCCATACATTTAGAAAGTTAGGCCAACATTCTGTTACATAGCATTGTTTAAATATTCCCCATGTAATGTTAAGgaagctaacatggctgccatagaatgtttaagtgtcatgtaaatgcatcAACATGCAGAAACCGCATTAGCCTACTAAATACATGGTTCTGGTTCTGCCTAATGTCCCACTGTTTTCTCAATGTCTCCTGTTACTTCTGTTTTGACCATTTCAACTCTCTGTGTGTAAGTATCTCTGATTGCCAAACTAATACCCCATACATTTCTCCATTTGAATTCTCTTATTTTGGTTTAGAGTTTTGAGAAGGCATACAGGCATGGTGGATATCTTCCTTACCTCtttgtaattattttttttttgtattttattttcggGAACTCTACTACTATCATGCAATTTTGTGTCTGCTGTGCTTGGGAGAGGGAAGGTTGTCAATAGTTGAAACCTCAAACTGGAGTTCATGGAATAAAGAAGAATTTCAAAATC
>XM_036979955.1
CAATTACACAATGACCCCGCCCTTTGTGTCATAATGTTTGCGCATGCTCAGTCCGCAACTCTGTGCTTTCTCCTTCACTGTGCCCTATTGCGCGAGACAGAACGTTCTGAAACTTCGCTCATCGCCCCTTAAAATAAGtcacCATGGCTGTTCCTCCTGCATACTCAGACCTGGGAAAATCTGCCAAAGACATCTTCAGCAAGGGCTATGGCTTTGGAATTGTGAAACTGGACCTAAAGACCAAGGCCCAGAGTGGAGTTGAGTTTGCGACCTCAGGCTCCAGTAACACAGACACAGGGAAGGCAGCAGGTAACCTGGAGACCAAATATAAGGTGAAGGAGCTGGGCCTGAGCTTCAACCAGAAATGGAACACAGACAACACCCTGACCACCGAGGTCTCCATAGAGGACCAGTTGGCTAAGGGCTTGAAGCTGGCTCTGGACACATCGTTCGTGCCCAACACTGGTAAGAAGAGTGCCAAGCTGAAGACTGGTTACAAGCGGGACTTCATCAACCTGGGCTGTGACCTGGACTTTGACATGGCCGGCCCCACGGTCCATGCTGCTGCCGTGCTGGGCTAtgagggctggctggctgggtaccAGATGGCCTTCGACACAGCCAAGTCCAAACTGTCCCAGAACAACTTTGCCCTGGGATACAAGGCTGGGGACTTCCAGCTCCACACCAATGTTAACGACGGTACAGAGTTCGGTGGCTCCATCTACCAGAAGGTGAACTGCCACTTGGAAACAGCCATCAACCTTGCCTGGACGGCCGGCAGCAACAACACACGCTTTGGCATCGGAGCCAAATACCAGCTGGACAAGGACGCTTCCCTGTCTgCCAAAGTCAACAACGCCAGTCTGATTGGAGTCGGCTACACACAGGTTCTCCGGCCAGgagtgAAGCTGACTCTCTCAGCTCTGATCGATGGGAAGAACTTCAACGCAGGCGGCCACAAGGTTGGCATGGGCTTTGAGCTGGAGGCAtaaggatggaggggagaggagaagagggggatgggTGAAGGAAGGGAAAGATCCCGAATCtgacaaaacacacatacacatacacacgcacagagagagtGTGTCTTTTGGCCTTAACCCTACAGCCCTTAGCACCCTCTGAGACCCCCAGTACTATATTAAAATGGACAGACTGTCGAGAACCAAGTTGTTTTTTGGTTAGCTTTAGGTTCACCATCTCTCTGTATTATCTCCTTAGCAATACCACTACGTAAGGGACATCTGTCATGCCATGGCACTGGAGCAGGCAGCCAGTGAGCAAGTctcaaatgacactctattcacCAGGAGTTTACTAATTcacatagggctctgatcaaaagtggtGTACTGTATGCAGAACAGTGTGTTTGAAACAGACAAGTCTGAAGTCAACCTTTTGTTCCACTTCCTCCCCATAAGCAGACATATCCTCTTTTCTGTGTGTGCACCTTTTTAGTAGGGTTTGATTGTGTGGTATACTTTCCCTTTGCCTGAGATCATGTGTTTAATCTACTTTTGACttgtgacaaaacattttttagattGACAGTGTACTTCGGTTTGTGTATTTGTGGTACACTATTGATTCGATCAAAGCCAGAGGGGAGTTGTTTTCAAGGaataacttattttttaaatgtcatgATGTTCCGTTGTCCCAGACCTTTTACAGGCCTGTTTGTGGAAGGATGTCCACTTTCAGTGATACATAAACAGGGACACATTGACACGAGCATACTGCAATAAAATGGGTGGCTAATAACTTGAAAATGAGACGGGTTGAGTTTCTGTTTCCAAATCAGGGAAATATCTGTAGTACAGAGAACTTGGAAGATTCCACCTTGACAGTAAGATTTGTTGACTGACTTGTATTCCCATTCCAGAACATAAAGCAGTGTAACAATAGCTGAATGTTCTGCCCAGAGCCATACATTTAGAAAGTTAGGCCAACATTCTGTTACATAGCATTGTTTAAATATTCCCCATGTAATGTTAAGgaagctaacatggctgccatagaatgtttaagtgtcatgtaaatgcatcAACATGCAGAAACCGCATTAGCCTACTAAATACATGGTTCTGGTTCTGCCTAATGTCCCACTGTTTTCTCAATGTCTCCTGTTACTTCTGTTTTGACCATTTCAACTCTCTGTGTGTAAGTATCTCTGATTGCCAAACTAATACCCCATACATTTCTCCATTTGAATTCTCTTATTTTGGTTTAGAGTTTTGAGAAGGCATACAGGCATGGTGGATATCTTCCTTACCTCtttgtaattattttttttttgtattttattttcggGAACTCTACTACTATCATGCAATTTTGTGTCTGCTGTGCTTGGGAGAGGGAAGGTTGTCAATAGTTGAAACCTCAAACTGGAGTTCATGGAATAAAGAAGAATTTCAAAATC
>XM_036979951.1
CCCCGCCCTTTGTGTCATAATGTTTGCGCATGCTCAGTCCGCAACTCTGTGCTTTCTCCTTCACTGTGCCCTATTGCGCGAGACAGAACGTTCTGAAACTTCGCTCATCGCCCCTTAAAATAAGAGTCATGTCAGACAAAGGCGGAGAGAAGGCGAGCCTggtgaggaaggagggggagagtccAGCAGCACAGGCCAGTCAGAACAAAGGAGCTCCCTGTGTGCCATGTTGCCACAaggtcacCATGGCTGTTCCTCCTGCATACTCAGACCTGGGAAAATCTGCCAAAGACATCTTCAGCAAGGGCTATGGCTTTGGAATTGTGAAACTGGACCTAAAGACCAAGGCCCAGAGTGGAGTTATGGAGTTTGCGACCTCAGGCTCCAGTAACACAGACACAGGGAAGGCAGCAGGTAACCTGGAGACCAAATATAAGGTGAAGGAGCTGGGCCTGAGCTTCAACCAGAAATGGAACACAGACAACACCCTGACCACCGAGGTCTCCATAGAGGACCAGTTGGCTAAGGGCTTGAAGCTGGCTCTGGACACATCGTTCGTGCCCAACACTGGTAAGAAGAGTGCCAAGCTGAAGACTGGTTACAAGCGGGACTTCATCAACCTGGGCTGTGACCTGGACTTTGACATGGCCGGCCCCACGGTCCATGCTGCTGCCGTGCTGGGCTAtgagggctggctggctgggtaccAGATGGCCTTCGACACAGCCAAGTCCAAACTGTCCCAGAACAACTTTGCCCTGGGATACAAGGCTGGGGACTTCCAGCTCCACACCAATGTTAACGACGGTACAGAGTTCGGTGGCTCCATCTACCAGAAGGTGAACTGCCACTTGGAAACAGCCATCAACCTTGCCTGGACGGCCGGCAGCAACAACACACGCTTTGGCATCGGAGCCAAATACCAGCTGGACAAGGACGCTTCCCTGTCTgCCAAAGTCAACAACGCCAGTCTGATTGGAGTCGGCTACACACAGGTTCTCCGGCCAGgagtgAAGCTGACTCTCTCAGCTCTGATCGATGGGAAGAACTTCAACGCAGGCGGCCACAAGGTTGGCATGGGCTTTGAGCTGGAGGCAtaaggatggaggggagaggagaagagggggatgggTGAAGGAAGGGAAAGATCCCGAATCtgacaaaacacacatacacatacacacgcacagagagagtGTGTCTTTTGGCCTTAACCCTACAGCCCTTAGCACCCTCTGAGACCCCCAGTACTATATTAAAATGGACAGACTGTCGAGAACCAAGTTGTTTTTTGGTTAGCTTTAGGTTCACCATCTCTCTGTATTATCTCCTTAGCAATACCACTACGTAAGGGACATCTGTCATGCCATGGCACTGGAGCAGGCAGCCAGTGAGCAAGTctcaaatgacactctattcacCAGGAGTTTACTAATTcacatagggctctgatcaaaagtggtGTACTGTATGCAGAACAGTGTGTTTGAAACAGACAAGTCTGAAGTCAACCTTTTGTTCCACTTCCTCCCCATAAGCAGACATATCCTCTTTTCTGTGTGTGCACCTTTTTAGTAGGGTTTGATTGTGTGGTATACTTTCCCTTTGCCTGAGATCATGTGTTTAATCTACTTTTGACttgtgacaaaacattttttagattGACAGTGTACTTCGGTTTGTGTATTTGTGGTACACTATTGATTCGATCAAAGCCAGAGGGGAGTTGTTTTCAAGGaataacttattttttaaatgtcatgATGTTCCGTTGTCCCAGACCTTTTACAGGCCTGTTTGTGGAAGGATGTCCACTTTCAGTGATACATAAACAGGGACACATTGACACGAGCATACTGCAATAAAATGGGTGGCTAATAACTTGAAAATGAGACGGGTTGAGTTTCTGTTTCCAAATCAGGGAAATATCTGTAGTACAGAGAACTTGGAAGATTCCACCTTGACAGTAAGATTTGTTGACTGACTTGTATTCCCATTCCAGAACATAAAGCAGTGTAACAATAGCTGAATGTTCTGCCCAGAGCCATACATTTAGAAAGTTAGGCCAACATTCTGTTACATAGCATTGTTTAAATATTCCCCATGTAATGTTAAGgaagctaacatggctgccatagaatgtttaagtgtcatgtaaatgcatcAACATGCAGAAACCGCATTAGCCTACTAAATACATGGTTCTGGTTCTGCCTAATGTCCCACTGTTTTCTCAATGTCTCCTGTTACTTCTGTTTTGACCATTTCAACTCTCTGTGTGTAAGTATCTCTGATTGCCAAACTAATACCCCATACATTTCTCCATTTGAATTCTCTTATTTTGGTTTAGAGTTTTGAGAAGGCATACAGGCATGGTGGATATCTTCCTTACCTCtttgtaattattttttttttgtattttattttcggGAACTCTACTACTATCATGCAATTTTGTGTCTGCTGTGCTTGGGAGAGGGAAGGTTGTCAATAGTTGAAACCTCAAACTGGAGTTCATGGAATAAAGAAGAATTTCAAAATC
>XM_036979952.1
CCCCGCCCTTTGTGTCATAATGTTTGCGCATGCTCAGTCCGCAACTCTGTGCTTTCTCCTTCACTGTGCCCTATTGCGCGAGACAGAACGTTCTGAAACTTCGCTCATCGCCCCTTAAAATAAGAGTCATGTCAGACAAAGGCGGAGAGAAGGCGAGCCTggtgaggaaggagggggagagtccAGCAGCACAGGCCAGTCAGAACAAAGGAGCTCCCTGTGTGCCATGTTGCCACAaggtcacCATGGCTGTTCCTCCTGCATACTCAGACCTGGGAAAATCTGCCAAAGACATCTTCAGCAAGGGCTATGGCTTTGGAATTGTGAAACTGGACCTAAAGACCAAGGCCCAGAGTGGAGTTGAGTTTGCGACCTCAGGCTCCAGTAACACAGACACAGGGAAGGCAGCAGGTAACCTGGAGACCAAATATAAGGTGAAGGAGCTGGGCCTGAGCTTCAACCAGAAATGGAACACAGACAACACCCTGACCACCGAGGTCTCCATAGAGGACCAGTTGGCTAAGGGCTTGAAGCTGGCTCTGGACACATCGTTCGTGCCCAACACTGGTAAGAAGAGTGCCAAGCTGAAGACTGGTTACAAGCGGGACTTCATCAACCTGGGCTGTGACCTGGACTTTGACATGGCCGGCCCCACGGTCCATGCTGCTGCCGTGCTGGGCTAtgagggctggctggctgggtaccAGATGGCCTTCGACACAGCCAAGTCCAAACTGTCCCAGAACAACTTTGCCCTGGGATACAAGGCTGGGGACTTCCAGCTCCACACCAATGTTAACGACGGTACAGAGTTCGGTGGCTCCATCTACCAGAAGGTGAACTGCCACTTGGAAACAGCCATCAACCTTGCCTGGACGGCCGGCAGCAACAACACACGCTTTGGCATCGGAGCCAAATACCAGCTGGACAAGGACGCTTCCCTGTCTgCCAAAGTCAACAACGCCAGTCTGATTGGAGTCGGCTACACACAGGTTCTCCGGCCAGgagtgAAGCTGACTCTCTCAGCTCTGATCGATGGGAAGAACTTCAACGCAGGCGGCCACAAGGTTGGCATGGGCTTTGAGCTGGAGGCAtaaggatggaggggagaggagaagagggggatgggTGAAGGAAGGGAAAGATCCCGAATCtgacaaaacacacatacacatacacacgcacagagagagtGTGTCTTTTGGCCTTAACCCTACAGCCCTTAGCACCCTCTGAGACCCCCAGTACTATATTAAAATGGACAGACTGTCGAGAACCAAGTTGTTTTTTGGTTAGCTTTAGGTTCACCATCTCTCTGTATTATCTCCTTAGCAATACCACTACGTAAGGGACATCTGTCATGCCATGGCACTGGAGCAGGCAGCCAGTGAGCAAGTctcaaatgacactctattcacCAGGAGTTTACTAATTcacatagggctctgatcaaaagtggtGTACTGTATGCAGAACAGTGTGTTTGAAACAGACAAGTCTGAAGTCAACCTTTTGTTCCACTTCCTCCCCATAAGCAGACATATCCTCTTTTCTGTGTGTGCACCTTTTTAGTAGGGTTTGATTGTGTGGTATACTTTCCCTTTGCCTGAGATCATGTGTTTAATCTACTTTTGACttgtgacaaaacattttttagattGACAGTGTACTTCGGTTTGTGTATTTGTGGTACACTATTGATTCGATCAAAGCCAGAGGGGAGTTGTTTTCAAGGaataacttattttttaaatgtcatgATGTTCCGTTGTCCCAGACCTTTTACAGGCCTGTTTGTGGAAGGATGTCCACTTTCAGTGATACATAAACAGGGACACATTGACACGAGCATACTGCAATAAAATGGGTGGCTAATAACTTGAAAATGAGACGGGTTGAGTTTCTGTTTCCAAATCAGGGAAATATCTGTAGTACAGAGAACTTGGAAGATTCCACCTTGACAGTAAGATTTGTTGACTGACTTGTATTCCCATTCCAGAACATAAAGCAGTGTAACAATAGCTGAATGTTCTGCCCAGAGCCATACATTTAGAAAGTTAGGCCAACATTCTGTTACATAGCATTGTTTAAATATTCCCCATGTAATGTTAAGgaagctaacatggctgccatagaatgtttaagtgtcatgtaaatgcatcAACATGCAGAAACCGCATTAGCCTACTAAATACATGGTTCTGGTTCTGCCTAATGTCCCACTGTTTTCTCAATGTCTCCTGTTACTTCTGTTTTGACCATTTCAACTCTCTGTGTGTAAGTATCTCTGATTGCCAAACTAATACCCCATACATTTCTCCATTTGAATTCTCTTATTTTGGTTTAGAGTTTTGAGAAGGCATACAGGCATGGTGGATATCTTCCTTACCTCtttgtaattattttttttttgtattttattttcggGAACTCTACTACTATCATGCAATTTTGTGTCTGCTGTGCTTGGGAGAGGGAAGGTTGTCAATAGTTGAAACCTCAAACTGGAGTTCATGGAATAAAGAAGAATTTCAAAATC

Function

NR:

description
voltage-dependent anion-selective channel protein 2-like isoform X2

GO:

id name namespace
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0044070 regulation of anion transport biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0008308 voltage-gated anion channel activity molecular_function

KEGG:

id description
K15041 VDAC3; voltage-dependent anion channel protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979953.1 False 2440 mRNA 0.46 10 33352672 33367435
XM_036979955.1 False 2437 mRNA 0.46 9 33352672 33367435
XM_036979951.1 False 2542 mRNA 0.46 11 33352686 33367435
XM_036979952.1 True 2539 mRNA 0.46 10 33352686 33367435

Neighbor

gene id symbol gene type direction distance location
LOC110525811 rpl6 coding upstream 21075 33327503 ~ 33331597 (+)
LOC110525808 LOC106585052 coding upstream 26284 33321939 ~ 33326388 (+)
c6h22orf39 cssa24h22orf39 coding upstream 32319 33317578 ~ 33320353 (+)
LOC110525806 LOC106585051 coding upstream 35497 33313355 ~ 33317175 (+)
LOC110525805 LOC106585050 coding upstream 71724 33279198 ~ 33280948 (+)
LOC110525815 LOC106585058 coding downstream 52978 33420413 ~ 33439671 (+)
LOC110525816 LOC106585060 coding downstream 79811 33447246 ~ 33465055 (+)
LOC110525817 LOC106585059 coding downstream 98557 33465992 ~ 33508271 (+)
LOC110525819 slc25a1 coding downstream 147815 33515250 ~ 33568701 (+)
LOC110525821 LOC106585065 coding downstream 233249 33600684 ~ 33691211 (+)
G497925 NA non-coding upstream 5303 33347075 ~ 33347369 (+)
G497921 LOC103397138 non-coding upstream 15937 33332650 ~ 33336735 (+)
G497855 NA non-coding upstream 142883 33208850 ~ 33209789 (+)
G497853 NA non-coding upstream 153181 33199265 ~ 33199491 (+)
G497852 NA non-coding upstream 154133 33198142 ~ 33198539 (+)
G497933 NA non-coding downstream 1279 33368714 ~ 33368925 (+)
G497939 NA non-coding downstream 11471 33378906 ~ 33379166 (+)
G497944 NA non-coding downstream 17189 33384624 ~ 33384857 (+)
G497945 NA non-coding downstream 17726 33385161 ~ 33385378 (+)
G497946 NA non-coding downstream 18292 33385727 ~ 33386632 (+)
LOC110525799 LOC106585046 other upstream 188411 33135282 ~ 33165186 (+)
polk polk other upstream 423821 32926258 ~ 32936958 (+)
G495920 LOC106584987 other upstream 2039935 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 2342068 31006547 ~ 31022524 (+)
G499111 NA other downstream 783705 34151140 ~ 34151737 (+)
fancc fancc other downstream 5902524 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 6306577 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 6367349 39734703 ~ 39750180 (+)

Expression


Co-expression Network