Item | Value |
---|---|
gene id | LOC110525817 |
gene name | LOC106585059 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 33465992 ~ 33508271 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
clathrin heavy chain 1-like isoform X1 |
id | description |
---|---|
K04646 | CLTC; clathrin heavy chain |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021606255.2 | False | 8323 | mRNA | 0.52 | 33 | 33465992 | 33508271 |
XM_021606256.2 | False | 8295 | mRNA | 0.52 | 32 | 33465993 | 33508271 |
XM_021606257.2 | True | 7818 | mRNA | 0.52 | 32 | 33485349 | 33508271 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110525816 | LOC106585060 | coding | upstream | 1216 | 33447246 ~ 33465055 (+) |
LOC110525815 | LOC106585058 | coding | upstream | 26321 | 33420413 ~ 33439671 (+) |
LOC110525814 | LOC106585056 | coding | upstream | 98557 | 33352672 ~ 33367435 (+) |
LOC110525811 | rpl6 | coding | upstream | 134395 | 33327503 ~ 33331597 (+) |
LOC110525808 | LOC106585052 | coding | upstream | 139604 | 33321939 ~ 33326388 (+) |
LOC110525819 | slc25a1 | coding | downstream | 6979 | 33515250 ~ 33568701 (+) |
LOC110525821 | LOC106585065 | coding | downstream | 92413 | 33600684 ~ 33691211 (+) |
LOC110525823 | LOC106585068 | coding | downstream | 220825 | 33729096 ~ 33750556 (+) |
LOC110525824 | LOC106585069 | coding | downstream | 247833 | 33756104 ~ 33766480 (+) |
fahd2a | LOC106585073 | coding | downstream | 462132 | 33970403 ~ 33973787 (+) |
G497958 | NA | non-coding | upstream | 64467 | 33401208 ~ 33401525 (+) |
G497948 | NA | non-coding | upstream | 77573 | 33388179 ~ 33388419 (+) |
G497946 | NA | non-coding | upstream | 79360 | 33385727 ~ 33386632 (+) |
G497945 | NA | non-coding | upstream | 80614 | 33385161 ~ 33385378 (+) |
G497944 | NA | non-coding | upstream | 81135 | 33384624 ~ 33384857 (+) |
G498010 | NA | non-coding | downstream | 4959 | 33513230 ~ 33513454 (+) |
G498018 | NA | non-coding | downstream | 14050 | 33522321 ~ 33522610 (+) |
G498174 | NA | non-coding | downstream | 269947 | 33778218 ~ 33779928 (+) |
c6h22orf39 | cssa24h22orf39 | other | upstream | 145644 | 33317578 ~ 33320353 (+) |
LOC110525799 | LOC106585046 | other | upstream | 301731 | 33135282 ~ 33165186 (+) |
polk | polk | other | upstream | 537141 | 32926258 ~ 32936958 (+) |
G495920 | LOC106584987 | other | upstream | 2153255 | 31294946 ~ 31312737 (+) |
G499111 | NA | other | downstream | 642869 | 34151140 ~ 34151737 (+) |
fancc | fancc | other | downstream | 5761688 | 39269915 ~ 39312098 (+) |
LOC110525927 | smim15 | other | downstream | 6165741 | 39673964 ~ 39680031 (+) |
LOC110525928 | LOC106585161 | other | downstream | 6226513 | 39734703 ~ 39750180 (+) |
G505988 | NA | other | downstream | 6454381 | 39962652 ~ 39963098 (+) |