LOC110525024


Basic Information

Item Value
gene id LOC110525024
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 34277225 ~ 34278881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473696.2
TATTGTTCATTCATACATCCTATCAGCATTGGATGTACTGCAGGAACATTATCTTTAAATTCGTATTCATTGGGACTGTAAAACCCTTCCCTTTCCATGCTGAAGACAAGGGGATACTCAACCTAATCAAGAAATGATGGAAATTAAAAAGGAGATTCTGAGGACCAccctttgtgttttctttgtggTGACAGTATCTTATTCAAAACCAGTCAGTCTGCATGGATTCCAGTTCAGAAACCTGATGGCTGACAGCCTGGAATCTTCTGAGTCTTCTGAGTCCAACGAGTCTTCTGAGAACATTGGCGTAGCACCACAGACAGCCAATGGTCAGCCAATGGTCACTGGCGCTGAGACTGCAATaccagacacagaggaggagaccGATCCACAAGAAAGCGATGCTATACCCTCTGAAACAGCCTCAGAGGTTGATGATGCTTTGATCGCTTCACAAACTGCACTTGGAACTGAagcctcatcggcagactcactAAATGGGACAGAAACTGAGACTACCTCACAACATCCAGCCATAATCACAGTGACTGATTCTCCCAGTCTGACTTCTGATGTCATAACCCATATAAGGTCTATGCTCACGACAGCTCTTCCATCAATCATTGACACAGCTACAATCCAAGAATTCCATGTGGGCACAACTCTTTCCCCGAGCCCATACCCCATACCCATTATGGAGCAGCCAACAACTCCACCCGTCTCCTCAGTACTAGGCCTAACTCCCCAGCAGCCAGTTCCATTGGAAACCACTGATAACATATCTGCTGTGCCAGGTTGTTTTACTGTAGTTTACATAACTAACCCTCAGCCAGTTCCTGCTAGAGGCGATAACATTTAAAGCTGAGAGGAAACTAGAATATCTTTGATTAAAGCTGGAATCCGAAGTAGAGGGAAACAGTGCCACTGGCCAcggttgttattgtttttgttgccgAGCTTAGGAGCGTCGTCGCGCAGGATGGTAAAAATGTTTGCATGTATTGCCGTGTAATGATGTCCAATGCGGAAAAAATTGTATTCTTTGTTagcagtaacttctttgttgttgtaatgttgCAACGGACATGTctgtttcaccattaaggattctagctttaaaggtcaaatgcagccatttttatctcaatatcaaatcatttctgggtaacaattaagtactttaCTGTCATTGCTAtgaattaaaatggtcaaaattgAAAAGTCACTTGCACATCCTTGTTGCAGTTTAATAAGAtgaaagctctgacgaaggccttgaggccgatacgtaaaccttaataaagagcagtgatactagcaagagcagcgGGCGGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC105029446

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473696.2 True 1335 mRNA 0.43 3 34277225 34278881

Neighbor

gene id symbol gene type direction distance location
fahd2a LOC106585073 coding upstream 303438 33970403 ~ 33973787 (+)
LOC110525824 LOC106585069 coding upstream 510745 33756104 ~ 33766480 (+)
LOC110525823 LOC106585068 coding upstream 527296 33729096 ~ 33750556 (+)
LOC110525821 LOC106585065 coding upstream 586014 33600684 ~ 33691211 (+)
LOC110525819 slc25a1 coding upstream 708524 33515250 ~ 33568701 (+)
LOC110525834 LOC106584952 coding downstream 13896 34292777 ~ 34298399 (+)
LOC110525837 LOC106585079 coding downstream 97270 34376151 ~ 34414688 (+)
LOC118964863 NA coding downstream 310662 34589543 ~ 34594418 (+)
LOC110525840 LOC106585083 coding downstream 506104 34784985 ~ 35201448 (+)
LOC110525841 LOC100195666 coding downstream 955687 35234568 ~ 35245606 (+)
G499186 LOC106585075 non-coding upstream 25537 34249829 ~ 34251688 (+)
G499129 NA non-coding upstream 112477 34164381 ~ 34164748 (+)
G499113 NA non-coding upstream 124104 34152860 ~ 34153121 (+)
G499112 NA non-coding upstream 124459 34152539 ~ 34152766 (+)
G499092 NA non-coding upstream 152585 34124380 ~ 34124640 (+)
G499201 LOC106586052 non-coding downstream 5726 34284607 ~ 34285317 (+)
G499207 NA non-coding downstream 24372 34303253 ~ 34305108 (+)
G499224 NA non-coding downstream 50001 34328882 ~ 34329085 (+)
G499225 NA non-coding downstream 50610 34329491 ~ 34329812 (+)
G499261 NA non-coding downstream 183483 34462364 ~ 34462623 (+)
G499111 NA other upstream 125488 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 812170 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 956877 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 1112964 33135282 ~ 33165186 (+)
polk polk other upstream 1348374 32926258 ~ 32936958 (+)
fancc fancc other downstream 4991078 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 5395131 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 5455903 39734703 ~ 39750180 (+)
G505988 NA other downstream 5683771 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 5917919 40196800 ~ 40203886 (+)

Expression


Co-expression Network