Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110525835 |
| gene name | LOC106585077 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 34303245 ~ 34327778 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021606286.2 | False | 5638 | mRNA | 0.53 | 28 | 34303245 | 34327772 |
| XM_021606288.2 | False | 5618 | mRNA | 0.53 | 27 | 34303245 | 34327773 |
| XM_021606285.2 | False | 5652 | mRNA | 0.53 | 28 | 34303245 | 34327777 |
| XM_021606287.2 | True | 5632 | mRNA | 0.53 | 27 | 34303245 | 34327778 |
34,292,000
34,296,000
34,300,000
34,304,000
34,308,000
34,312,000
34,316,000
34,320,000
34,324,000
34,328,000
34,332,000
34,336,000
34,340,000
34,344,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525833 | LOC106585075 | coding | downstream | 48982 | 34247634 ~ 34254263 (-) |
| LOC110525830 | LOC106585072 | coding | downstream | 333042 | 33953576 ~ 33970203 (-) |
| LOC110525832 | LOC106585071 | coding | downstream | 352412 | 33947962 ~ 33950833 (-) |
| LOC118965128 | NA | coding | downstream | 353453 | 33949722 ~ 33949792 (-) |
| kcnip3a | LOC106584951 | coding | downstream | 376200 | 33882644 ~ 33927045 (-) |
| piwil2 | rtili | coding | upstream | 3404 | 34331182 ~ 34366489 (-) |
| LOC110525025 | NA | coding | upstream | 168979 | 34496757 ~ 34497945 (-) |
| LOC110525838 | LOC106585080 | coding | upstream | 215634 | 34543412 ~ 34632897 (-) |
| LOC110525844 | LOC106585085 | coding | upstream | 926211 | 35253989 ~ 35284838 (-) |
| LOC110525847 | LOC106585088 | coding | upstream | 991440 | 35319218 ~ 35327656 (-) |
| G499127 | NA | non-coding | downstream | 141039 | 34161934 ~ 34162206 (-) |
| G499096 | NA | non-coding | downstream | 171682 | 34131206 ~ 34131563 (-) |
| G499084 | NA | non-coding | downstream | 181327 | 34121707 ~ 34121918 (-) |
| G499081 | NA | non-coding | downstream | 181806 | 34121202 ~ 34121439 (-) |
| G499074 | NA | non-coding | downstream | 185990 | 34117054 ~ 34117255 (-) |
| G499440 | NA | non-coding | upstream | 46793 | 34374571 ~ 34374790 (-) |
| G499497 | NA | non-coding | upstream | 139623 | 34467401 ~ 34467770 (-) |
| G499498 | NA | non-coding | upstream | 140211 | 34467989 ~ 34468195 (-) |
| G499507 | NA | non-coding | upstream | 149728 | 34477506 ~ 34478051 (-) |
| G499508 | NA | non-coding | upstream | 150490 | 34478268 ~ 34478548 (-) |
| G498960 | NA | other | downstream | 262071 | 34040359 ~ 34041174 (-) |
| LOC110525812 | LOC103397138 | other | downstream | 966465 | 33332650 ~ 33336818 (-) |
| G498484 | rpl6 | other | downstream | 972741 | 33327507 ~ 33330504 (-) |
| LOC110525784 | LOC106585031 | other | downstream | 1620398 | 32680037 ~ 32682899 (-) |
| G496851 | NA | other | downstream | 2410596 | 31843463 ~ 31892649 (-) |
| G501142 | NA | other | upstream | 1437588 | 35765366 ~ 35767929 (-) |
| hk2 | LOC106585103 | other | upstream | 2180278 | 36507843 ~ 36569143 (-) |
| vamp8 | LOC106585118 | other | upstream | 2722925 | 37050701 ~ 37065030 (-) |
| G503064 | NA | other | upstream | 2912066 | 37239844 ~ 37240937 (-) |
| G503159 | LOC106580514 | other | upstream | 3003706 | 37331484 ~ 37336552 (-) |
