txnrd2.2 (txnrd2)


Basic Information

Item Value
gene id txnrd2.2
gene name txnrd2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 35743748 ~ 35767946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606317.2
TCAGGCAGATTTCCAGACGCCTATGACTTCGTGAAGGTCCTTTTGTAAGAACAACATGGCAGCCTTATGTAGAGTCAGACACCGGTGGAAACGCACCAACTGCATTCAACTTCTTACGAGAAACTTGACCGGAACGTTTGACTATGATCTCGTCGTTATTGGTGGTGGCTCTGGGGGTCTGGCTTGTTCCAAAGAAGCGGCTCAGCTAGGACAGAAAGTTGCTGTGTTAGATTATGTGGAGCCGTCAGTTAAAGGTACTAAGTGGGGCATTGGTGGTACGTGCGTGAAcgtgggctgcattcccaagaaGCTCATGCACCAGGCTGCTCTGCTGGGCACAGCTCTGAAAGACGCTCAGAAATATGGCTGGCAAATCCCCGGGCCCATCTCCCATGACTGGAGTACCATGGCAGAGGCTGTGCAGAACCACGTCAGGTCTCTCAACTGGGGTCACCGTGTCCAGCTTCAGGACAAGGAAGTGAAGTATCTGAACGTTAAAGGAAGTCTGTTGGACGAGCACACGGTGAAAGGGTCAACCAGGACAGGAAAAGAGATTATGCTGACTGCTAAGAATATTGTGATTGCCACTGGGGGGCGGCCAAAGTACCCCACACATATCCCTGGCGCAGTCGAGCACGGCATCACTAGTGATGATATCTTCTGGCTGAAGGAGTCCCCTGGCAAGACACTTGTAGTTGGTGCCAGCTATGTGGCACTGGAGTGTGCTGGCTTCCTGACCGGTATTGGGCTGGAGACCACAGTCATGGTGCGCAGCATCCCCCTCCGAGGCTTTGATCAGCAAATGGCAGGGCTAGTGACAGACTACATGGAGGCCTATGGCACCAAGTTCTCCTGGAGGAGTGTCCCTAAGAGCGTGGACAAGCTGTCCTCTGGGGTGCTGCAGGTGACCTGGACAGACGAACAGACAGGAAAGGACCAACGGGACACCTTCGACTCTGTGCTGTGGGCCGTAGGCAGAGCCCCTGAAACCAAAACTCTCGGCCTGGAGAAAGTTGGCGTCAAGCTCAACAAAGAGTCGGGGAAAATACTTGTGGCTGCTGACGAATCCACATCTGTGCCGAACATCTACGCTTTCGGCGATATCGGCGAGGGTCGTCCTGAGTTGACCCCCACAGCCATTAAGGCAGGGAAGCTCCTCGCCCGCAGGCTCGCAGGCCAGACCAATGAGCTAATGAACTACGACAACGTCGCCACCACAGTGTTCACCCCTCTGGAGTATGGCTGTGTGGGCCTGTCAGAGGAGGAGGCTGAGAGCAGACATGGGAAGGACTCCATAGAGGTGTACCATGCCTTCTACAAGCCTCTGGAGTTCACTGTGGCTGAGAGAGATGCCAGCCAGTGTTACATAAAGGTGGTGTGTAAGCGGGGTGGAGACCAGAGAATCCTCGGCCTGCACTTCACTGGCCCCAACGCTGGAGAAGTTACCCAGGGCTTTGCTATGGGCTTCCAgtgtggGGCCACCCTCACTCACCTGAAGGAGACCGTGGGGATCCACCCCACTTGTGCCGAGGAGCTGACCAAAGTCAACGTCAGCAAGCGCTCTGGGCTGGATGCCACGGTTACCGGCTGCTGAGGTTAAGCACCCCCTTCTCTGAACACACCTGAGCACACGGGAAGGAACCTCCTCGTAGAGACAGGGAATGTGTCCCTAATGTCACCCTCCTCTCTATGTGGTgtactactttcaaccagggcccatagtgttctggtcaaaagtagtgcactagaaaggcAATATGGTCCCATTAGAGACGCATACAGGGAAGTAATTGTAATGCATATACACCCTAGCCACCTCATAACGGTCCATGTAGAAGCACTCTCTCCTTTCCCTGACATCCCAGTTCCACTGGATTTCAGGTCTCCACTCCGTCTTATCATTGCAGGTTCCTCCAGGTCATGACTGCAATGCTATATCTAGGTAAGGCTAGATTTGTGTCAGCTTTGACTAGTGGTCACATTAACCAGGCCATGGTTACCCAATCTAGCCCcttaatgtatgtagtatgtcCCCTTCTCCCATTTTGAAGGCCATAAGGAGTTCTAGACCCAGGTTCGTGAAAACGTCCAGACACAAGCAGCATCCTTTAAATAAACTGGCTCATAAATCAGAATTAGGGCCCATTCCAGTTTGTTGAAAATAACTGTATAAGAGCGAGAATGCCGGGCAACTAATGTTTCTGAAATATATTCAGCAAATATTGTTGTTTCTCCTCCTGTTCTTCCTGTCCATTAGTCTTGAAAGTGACACATGCGTTGCCCGGGTGACACTGATGGATGGGCCAAGGGCCGTCGCCGCGGTGACACCACCCGTTTCccatggacacacacaaacagtcggCGGGCAGGCTGTCAGTCAGAGAGGTGCAGAGCAGCACAGGGCCCAGTCTGGGCCAGAGTGCAGAGCCCTTGATTAGGCCTCCACTCATTCCAgcactctgccccccccccccccccccccttctcaccTCCCCTCAACCCCAATGCACAAAGGAATACAGTGGGACTACAATAACAatctctgtcagtctgtgtgtggggACGCCTTGGCCAGCAACCTCTGGCAACCCAATCCCTCtatgggagagatggagggaaagaaacTGCCTGGGCCACAGTGGTGGCAGTACTGAATGCTGCCTGAAGGTGGCGGTATTGTCCTCTTATTTTCTTCGAAAAACCTGCTAGTAAAGAAATGATAGGGTAATGAAGTCAGTGTATAATGAATAAGCCCGGGCACATTCAAGGTGCACATTGAGATGTCTGTTATGGAATGAATGTGGAGACCATGGAGGCATTTGTAGCGCTAACTGATAACATTGTGTATTTACACGGCTGGCAGTTTAGCCCACAAAGTCATCACCCTCTGAGATAAGGCCGATTGTTATTTCACTTAACTGCCATTATACTATTGTGATTTTTACCAGTCACGTAAATGATGTCGTACTATTTAAGTCTTCCAACATGTCAAGTACACCAGTCCACTCTTCACCCAATCATCCTTTCCTACAAGTCCTGAAAGCAGAGAACTATGTAGTGCTGGACTGAGCTGGACAGGTCATGCAGTTTGAGTGGAGTGGGGAACGGTGGAGCTGAGGGGAGCTAAGAGCAGGGCACTGGGCTGGTTTATTTGTGTTTGAACTCTAATCTGCCATGCCTGATTAATGATCCTGATGAGGGGAGTGACAGCGCACTGCTcaggatgatggagggaggggagagaggagagcaacaGCGCTACCAGGTTTATTTGGACCCGGGGTTGAGGCAGGGAGAGCGAGGGATGCAGCCAGACCaggggaagaggtggaggaggggggtggagaggtgaaggaggaggtgtAGAAGGAAGGGGTGATTCCTGTGTGCTCCGTTCAGGGACGGGGTGCTGACTGAAGGACCCTGACCCCCCCGCTCGGCAGGAACAGCTTGACTCCATCACCCACTACACATGCTGAGGCTGGGACCATCCAACACACACTGCCTGGGTGTATTTAGCCAGGCTTTCTCTCCCTTATTCTATATGCCTCATCTTAACGAGGCACTCAGTCCAGAGAgcaggctgctgctgctgggctCAAGGCAAAGTTGTTGATCCCATCTAACAGTAAGTTCCTGTATTTTCTGCACGAAGCTGCCCAAACGCACAAGTCAGAATCATATTTATGACAAACATTAATTTGTTATTGTATTGTTTGAAATGTCTCTGTTAATTGTTGTTGATAGACAAAAGTGCCTTGGGCCTAGGGGCTTAAATGGGAGCGCAGAATCAGCCTCAGCCTTGCAGAATGTAATGCTTAGTTCCTCACAGGGGTCAGGGTTCAACTTTCAGGTCGCCAGCTAATGATAACTTGCGCTAAAACCCACATCTGGGGAGGGCATGTCTGATGACACCTGGCGACCAACTTTAGTTACTGTAAATAGAGTAGCCTAATTCACAAAGACGCTTTGTATTGCATTATTTATATGTAAAGAAGGAATAAAATATGAGAATGCACTGATGTCTCCCATTAAAATAATGATGTCCTCTATTTCA

Function

symbol description
txnrd2 Predicted to enable protein homodimerization activity and thioredoxin-disulfide reductase activity. Involved in cell redox homeostasis. Located in cytosol and mitochondrion. Implicated in familial glucocorticoid deficiency.

NR:

description
thioredoxin reductase 2, mitochondrial

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004791 thioredoxin-disulfide reductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0050661 NADP binding molecular_function

KEGG:

id description
K22182 TXNRD; thioredoxin reductase (NADPH)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606317.2 True 4057 mRNA 0.51 17 35743748 35767946

Neighbor

gene id symbol gene type direction distance location
LOC110525852 arvcf coding upstream 3708 35506440 ~ 35740040 (+)
LOC110526892 NA coding upstream 307943 35429521 ~ 35435805 (+)
LOC110525848 zdhhc8 coding upstream 328712 35334881 ~ 35415036 (+)
LOC110525846 LOC106585087 coding upstream 424753 35306866 ~ 35318995 (+)
LOC110525843 LOC106585086 coding upstream 437304 35287066 ~ 35306444 (+)
gnb1l gnb1l coding downstream 19099 35787045 ~ 35815869 (+)
LOC110525856 LOC106585097 coding downstream 300822 36068768 ~ 36124738 (+)
LOC110525857 LOC106585098 coding downstream 359099 36127045 ~ 36140318 (+)
LOC110525858 LOC106585100 coding downstream 392325 36160271 ~ 36198750 (+)
LOC110525861 LOC106585102 coding downstream 435946 36203892 ~ 36213876 (+)
G500285 NA non-coding upstream 155989 35546592 ~ 35587759 (+)
G500225 dgcr8 non-coding upstream 301549 35441415 ~ 35442199 (+)
G500220 ranbp1 non-coding upstream 314379 35423381 ~ 35429369 (+)
G500127 NA non-coding upstream 323724 35418917 ~ 35420024 (+)
G500126 NA non-coding upstream 325267 35417127 ~ 35418481 (+)
G501145 NA non-coding downstream 3669 35771615 ~ 35771817 (+)
G501151 NA non-coding downstream 48660 35816606 ~ 35818595 (+)
G501182 NA non-coding downstream 85690 35853636 ~ 35925266 (+)
G501325 NA non-coding downstream 179330 35947276 ~ 35947476 (+)
G501353 NA non-coding downstream 212277 35980223 ~ 35980435 (+)
G499111 NA other upstream 1592011 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 2278693 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 2423400 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 2579487 33135282 ~ 33165186 (+)
polk polk other upstream 2814897 32926258 ~ 32936958 (+)
fancc fancc other downstream 3502013 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 3906066 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 3966838 39734703 ~ 39750180 (+)
G505988 NA other downstream 4194706 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 4428854 40196800 ~ 40203886 (+)

Expression


Co-expression Network