gnb1l (gnb1l)


Basic Information

Item Value
gene id gnb1l
gene name gnb1l
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 35787045 ~ 35815869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980002.1
AGTTGGCGTTGGTACAGCCAAAAGCTCAATGGCCCAGCCTGTCAGCGCATGAACTGCAAAAAAAAATGCAGGCACTGGTAAGGACGACTGAAAAGAAGGGTCCTTCAAGTTCAACCGGGGCTTGTTTTGCATCGCTTCCCTACGCTTTGCTAAGTTCAGTTGTGACTGCGGGATCTTGCTTGCGTTCCAGTGGATGAGATGACTGTGGTGGTGACCTCCAGAGCTTCGAGAGTGACCCAGTGATGGCTCGTCCTGCCCCTGCTCCCCTGTACACCCTGAGGGGGGCTGGATCCCCCCTTAATGCCTTGCACTTCGGCTGCTGTGAAGGGGACCCTCCCCTGCTCTTTTCTGGctCAGGCCAGGGGTCAGTCCATGTGTGGAACCTGACCACCAGAAGAGCTGAGAGGGTTCTAGAAGGTCATTCTGGAGCCTCTGTCACCTGGCTCAACATGCTCCACCCCAGAGACACTCTCATCAGTCAGGGGCGCGACATGCGTGTGTGCTTGTGGGACCTGGCAGAGGGGCGCGGTGATGTCACGGACGCCCTGTGGACCGGCAGTGTGGGGTTCTGTCGCTGTTCCCTGCTAGAGACTGGCCCTGGGAGATGGCTACTGGCCCACGCTGGAGAAGccatggaggagGTGAAGATCATTGAGCTGCCCAGCAAGAGCCCAGTTTGCTCCCTGATACCACAAGCCAAGCTGGGGATGGTCATGTGCATCAAGCTATGGCAGCCAGACTCAAGCCCTGGCCCTCTCCTCCTGGCCGGTTATGAGGACGGCTCCCTGACGCTGTGGGACGTATCCCAGAGGTCTGTGCTGAGCCGTGCGGCCGCCCACCCTGAGCCCGTCATGTGTCTGGACTTTGACCCCGCCGGGCAGAGGGGCATCTCTGGCTCCTCCGAGAAGAGTCTCGCCTCCTGGAAGCTTGACGGACAGCACAGACTCCAGCTCCAGGAACCCGTAGCCCTTGTGAATCCTGGGATCTCCCAGCTGTGCATCCGGGGGGACCGGAAAATCGTGGCGTCGGCCGGCTGGGACCATCGTGTCCGTGTGTTTGGCTGGAAGAAGCTCCGGCCCCTGGCTGTCCTCCAGCACCACACAGACATGGTGCTAAGCCTGGCCTTCTCAGACCACCAGGACCCCAGGAACAGGATGCTGGCCGCGGGCTCCAAAGACCAGCGCATCAGCCTCTGGTCCATATACAACCAGGGCAGCTCGGACACTGGGTGAGCTACTGGGCCCTGTTGGTATGTTATAGGGAGTCTTCTCGCCAGTGATTATACCAACTCTTTTACGCTCCTTTTACTATCCCAGGACTATATCTGAATGTACTGACTAGAGCTGGACTATGTGAACTACTGGGTAGGAACTTCTGTCTCAGACTGTGAAGACATTTCCGACATAGCCAAGATGGATCAGGTCAGAATGAGATGTCTTTGTGCTTCCAAACAAAAGCTGTCAAGACGGCTGGTTAGTTCTGCTAACAATTCACTGAGACTTAATTTGAACACATTATTTTTGGTCAAAACCAACTGTTTTATTGTGTTTGCTTATCTGGTAGGAGATTTGCCTGAGCGGACTTGAATTTGAGGTATAAGTCGCGCCTGAGTGACTGTGTAATCCTGTGTTGTTGATCTAGTTTAACATTGCCCTCTGCTCTGACCTACACTGCATCAGTCAAACAGGGTTAACCACAGAACTTGGACAGAAGAGACAAAGCTGTTTGTTAAGGAGGGCCACTGAACAATCTTCCCTCAACTAGAGAGGCTGTCTGTACGGATTTGGACTTAAGAGGTTACTTGTATTTTCAGTTTGGTCTTAAATGTATTTCTGTTTGTCATTGTGAGTACTATATGTTGCCCCTGTGCATTGTGGGAAAAATGTGTCAAATTCAAACTGTGATTGGATGCGTTTAAGGTTTGTGAATTACACCCCAAGTCCACCAAATGTAAATAGTATCTGCTATGCTTTTTAACTTTTTTATTTCCTGGTAATAAATATGTTTTTCTGTACATCCA
>XM_036980003.1
GTTGGTACAGCCAAAAGCTCAATGGCCCAGCCTGTCAGCGCATGAACTGCAAAAAAAAATGCAGGCACTGGTAAGGACGACTGAAAAGAAGGGTCCTTCAAGTTCAACCGGGGCTTGTTTTGCATCGCTTCCCTACGCTTTGCTAAGaagagcctcaattcgtcggggcatgtgtcgaaaggatgctggcccatgttgactccaatgcgtcACACAGTTGCCAAGTTgggtggatgtcctttgggtggcggaccattcttgatacgcaTGGGAAACTGTGGTggtgaaaacccagcagcgttgcagttcttgacacactcaaaccgTTCAGTTGTGACTGCGGGATCTTGCTTGCGTTCCAGTGGATGAGATGACTGTGGTGGTGACCTCCAGAGCTTCGAGAGTGACCCAGTGATGGCTCGTCCTGCCCCTGCTCCCCTGTACACCCTGAGGGGGGCTGGATCCCCCCTTAATGCCTTGCACTTCGGCTGCTGTGAAGGGGACCCTCCCCTGCTCTTTTCTGGctCAGGCCAGGGGTCAGTCCATGTGTGGAACCTGACCACCAGAAGAGCTGAGAGGGTTCTAGAAGGTCATTCTGGAGCCTCTGTCACCTGGCTCAACATGCTCCACCCCAGAGACACTCTCATCAGTCAGGGGCGCGACATGCGTGTGTGCTTGTGGGACCTGGCAGAGGGGCGCGGTGATGTCACGGACGCCCTGTGGACCGGCAGTGTGGGGTTCTGTCGCTGTTCCCTGCTAGAGACTGGCCCTGGGAGATGGCTACTGGCCCACGCTGGAGAAGccatggaggagGTGAAGATCATTGAGCTGCCCAGCAAGAGCCCAGTTTGCTCCCTGATACCACAAGCCAAGCTGGGGATGGTCATGTGCATCAAGCTATGGCAGCCAGACTCAAGCCCTGGCCCTCTCCTCCTGGCCGGTTATGAGGACGGCTCCCTGACGCTGTGGGACGTATCCCAGAGGTCTGTGCTGAGCCGTGCGGCCGCCCACCCTGAGCCCGTCATGTGTCTGGACTTTGACCCCGCCGGGCAGAGGGGCATCTCTGGCTCCTCCGAGAAGAGTCTCGCCTCCTGGAAGCTTGACGGACAGCACAGACTCCAGCTCCAGGAACCCGTAGCCCTTGTGAATCCTGGGATCTCCCAGCTGTGCATCCGGGGGGACCGGAAAATCGTGGCGTCGGCCGGCTGGGACCATCGTGTCCGTGTGTTTGGCTGGAAGAAGCTCCGGCCCCTGGCTGTCCTCCAGCACCACACAGACATGGTGCTAAGCCTGGCCTTCTCAGACCACCAGGACCCCAGGAACAGGATGCTGGCCGCGGGCTCCAAAGACCAGCGCATCAGCCTCTGGTCCATATACAACCAGGGCAGCTCGGACACTGGGTGAGCTACTGGGCCCTGTTGGTATGTTATAGGGAGTCTTCTCGCCAGTGATTATACCAACTCTTTTACGCTCCTTTTACTATCCCAGGACTATATCTGAATGTACTGACTAGAGCTGGACTATGTGAACTACTGGGTAGGAACTTCTGTCTCAGACTGTGAAGACATTTCCGACATAGCCAAGATGGATCAGGTCAGAATGAGATGTCTTTGTGCTTCCAAACAAAAGCTGTCAAGACGGCTGGTTAGTTCTGCTAACAATTCACTGAGACTTAATTTGAACACATTATTTTTGGTCAAAACCAACTGTTTTATTGTGTTTGCTTATCTGGTAGGAGATTTGCCTGAGCGGACTTGAATTTGAGGTATAAGTCGCGCCTGAGTGACTGTGTAATCCTGTGTTGTTGATCTAGTTTAACATTGCCCTCTGCTCTGACCTACACTGCATCAGTCAAACAGGGTTAACCACAGAACTTGGACAGAAGAGACAAAGCTGTTTGTTAAGGAGGGCCACTGAACAATCTTCCCTCAACTAGAGAGGCTGTCTGTACGGATTTGGACTTAAGAGGTTACTTGTATTTTCAGTTTGGTCTTAAATGTATTTCTGTTTGTCATTGTGAGTACTATATGTTGCCCCTGTGCATTGTGGGAAAAATGTGTCAAATTCAAACTGTGATTGGATGCGTTTAAGGTTTGTGAATTACACCCCAAGTCCACCAAATGTAAATAGTATCTGCTATGCTTTTTAACTTTTTTATTTCCTGGTAATAAATATGTTTTTCTGTACATCCA
>XM_036980004.1
GTTGGTACAGCCAAAAGCTCAATGGCCCAGCCTGTCAGCGCATGAACTGCAAAAAAAAATGCAGGCACTGGTAAGGACGACTGAAAAGAAGGGTCCTTCAAGTTCAACCGGGGCTTGTTTTGCATCGCTTCCCTACGCTTTGCTAAGaagagcctcaattcgtcggggcatgtgtcgaaaggatgctggcccatgttgactccaatgcgtcACACAGTTGCCAAGTTgggtggatgtcctttgggtggcggaccattcttgatacgcaTGGGAAACTGTGGTggtgaaaacccagcagcgttgcagttcttgacacactcaaaccgTGGATGAGATGACTGTGGTGGTGACCTCCAGAGCTTCGAGAGTGACCCAGTGATGGCTCGTCCTGCCCCTGCTCCCCTGTACACCCTGAGGGGGGCTGGATCCCCCCTTAATGCCTTGCACTTCGGCTGCTGTGAAGGGGACCCTCCCCTGCTCTTTTCTGGctCAGGCCAGGGGTCAGTCCATGTGTGGAACCTGACCACCAGAAGAGCTGAGAGGGTTCTAGAAGGTCATTCTGGAGCCTCTGTCACCTGGCTCAACATGCTCCACCCCAGAGACACTCTCATCAGTCAGGGGCGCGACATGCGTGTGTGCTTGTGGGACCTGGCAGAGGGGCGCGGTGATGTCACGGACGCCCTGTGGACCGGCAGTGTGGGGTTCTGTCGCTGTTCCCTGCTAGAGACTGGCCCTGGGAGATGGCTACTGGCCCACGCTGGAGAAGccatggaggagGTGAAGATCATTGAGCTGCCCAGCAAGAGCCCAGTTTGCTCCCTGATACCACAAGCCAAGCTGGGGATGGTCATGTGCATCAAGCTATGGCAGCCAGACTCAAGCCCTGGCCCTCTCCTCCTGGCCGGTTATGAGGACGGCTCCCTGACGCTGTGGGACGTATCCCAGAGGTCTGTGCTGAGCCGTGCGGCCGCCCACCCTGAGCCCGTCATGTGTCTGGACTTTGACCCCGCCGGGCAGAGGGGCATCTCTGGCTCCTCCGAGAAGAGTCTCGCCTCCTGGAAGCTTGACGGACAGCACAGACTCCAGCTCCAGGAACCCGTAGCCCTTGTGAATCCTGGGATCTCCCAGCTGTGCATCCGGGGGGACCGGAAAATCGTGGCGTCGGCCGGCTGGGACCATCGTGTCCGTGTGTTTGGCTGGAAGAAGCTCCGGCCCCTGGCTGTCCTCCAGCACCACACAGACATGGTGCTAAGCCTGGCCTTCTCAGACCACCAGGACCCCAGGAACAGGATGCTGGCCGCGGGCTCCAAAGACCAGCGCATCAGCCTCTGGTCCATATACAACCAGGGCAGCTCGGACACTGGGTGAGCTACTGGGCCCTGTTGGTATGTTATAGGGAGTCTTCTCGCCAGTGATTATACCAACTCTTTTACGCTCCTTTTACTATCCCAGGACTATATCTGAATGTACTGACTAGAGCTGGACTATGTGAACTACTGGGTAGGAACTTCTGTCTCAGACTGTGAAGACATTTCCGACATAGCCAAGATGGATCAGGTCAGAATGAGATGTCTTTGTGCTTCCAAACAAAAGCTGTCAAGACGGCTGGTTAGTTCTGCTAACAATTCACTGAGACTTAATTTGAACACATTATTTTTGGTCAAAACCAACTGTTTTATTGTGTTTGCTTATCTGGTAGGAGATTTGCCTGAGCGGACTTGAATTTGAGGTATAAGTCGCGCCTGAGTGACTGTGTAATCCTGTGTTGTTGATCTAGTTTAACATTGCCCTCTGCTCTGACCTACACTGCATCAGTCAAACAGGGTTAACCACAGAACTTGGACAGAAGAGACAAAGCTGTTTGTTAAGGAGGGCCACTGAACAATCTTCCCTCAACTAGAGAGGCTGTCTGTACGGATTTGGACTTAAGAGGTTACTTGTATTTTCAGTTTGGTCTTAAATGTATTTCTGTTTGTCATTGTGAGTACTATATGTTGCCCCTGTGCATTGTGGGAAAAATGTGTCAAATTCAAACTGTGATTGGATGCGTTTAAGGTTTGTGAATTACACCCCAAGTCCACCAAATGTAAATAGTATCTGCTATGCTTTTTAACTTTTTTATTTCCTGGTAATAAATATGTTTTTCTGTACATCCA
>XM_036980005.1
GTACAGCCAAAAGCTCAATGGCCCAGCCTGTCAGCGCATGAACTGCAAAAAAAAATGCAGGCACTGGTAAGGACGACTGAAAAGAAGGGTCCTTCAAGTTCAACCGGGGCTTGTTTTGCATCGCTTCCCTACGCTTTGCTAAGTGGATGAGATGACTGTGGTGGTGACCTCCAGAGCTTCGAGAGTGACCCAGTGATGGCTCGTCCTGCCCCTGCTCCCCTGTACACCCTGAGGGGGGCTGGATCCCCCCTTAATGCCTTGCACTTCGGCTGCTGTGAAGGGGACCCTCCCCTGCTCTTTTCTGGctCAGGCCAGGGGTCAGTCCATGTGTGGAACCTGACCACCAGAAGAGCTGAGAGGGTTCTAGAAGGTCATTCTGGAGCCTCTGTCACCTGGCTCAACATGCTCCACCCCAGAGACACTCTCATCAGTCAGGGGCGCGACATGCGTGTGTGCTTGTGGGACCTGGCAGAGGGGCGCGGTGATGTCACGGACGCCCTGTGGACCGGCAGTGTGGGGTTCTGTCGCTGTTCCCTGCTAGAGACTGGCCCTGGGAGATGGCTACTGGCCCACGCTGGAGAAGccatggaggagGTGAAGATCATTGAGCTGCCCAGCAAGAGCCCAGTTTGCTCCCTGATACCACAAGCCAAGCTGGGGATGGTCATGTGCATCAAGCTATGGCAGCCAGACTCAAGCCCTGGCCCTCTCCTCCTGGCCGGTTATGAGGACGGCTCCCTGACGCTGTGGGACGTATCCCAGAGGTCTGTGCTGAGCCGTGCGGCCGCCCACCCTGAGCCCGTCATGTGTCTGGACTTTGACCCCGCCGGGCAGAGGGGCATCTCTGGCTCCTCCGAGAAGAGTCTCGCCTCCTGGAAGCTTGACGGACAGCACAGACTCCAGCTCCAGGAACCCGTAGCCCTTGTGAATCCTGGGATCTCCCAGCTGTGCATCCGGGGGGACCGGAAAATCGTGGCGTCGGCCGGCTGGGACCATCGTGTCCGTGTGTTTGGCTGGAAGAAGCTCCGGCCCCTGGCTGTCCTCCAGCACCACACAGACATGGTGCTAAGCCTGGCCTTCTCAGACCACCAGGACCCCAGGAACAGGATGCTGGCCGCGGGCTCCAAAGACCAGCGCATCAGCCTCTGGTCCATATACAACCAGGGCAGCTCGGACACTGGGTGAGCTACTGGGCCCTGTTGGTATGTTATAGGGAGTCTTCTCGCCAGTGATTATACCAACTCTTTTACGCTCCTTTTACTATCCCAGGACTATATCTGAATGTACTGACTAGAGCTGGACTATGTGAACTACTGGGTAGGAACTTCTGTCTCAGACTGTGAAGACATTTCCGACATAGCCAAGATGGATCAGGTCAGAATGAGATGTCTTTGTGCTTCCAAACAAAAGCTGTCAAGACGGCTGGTTAGTTCTGCTAACAATTCACTGAGACTTAATTTGAACACATTATTTTTGGTCAAAACCAACTGTTTTATTGTGTTTGCTTATCTGGTAGGAGATTTGCCTGAGCGGACTTGAATTTGAGGTATAAGTCGCGCCTGAGTGACTGTGTAATCCTGTGTTGTTGATCTAGTTTAACATTGCCCTCTGCTCTGACCTACACTGCATCAGTCAAACAGGGTTAACCACAGAACTTGGACAGAAGAGACAAAGCTGTTTGTTAAGGAGGGCCACTGAACAATCTTCCCTCAACTAGAGAGGCTGTCTGTACGGATTTGGACTTAAGAGGTTACTTGTATTTTCAGTTTGGTCTTAAATGTATTTCTGTTTGTCATTGTGAGTACTATATGTTGCCCCTGTGCATTGTGGGAAAAATGTGTCAAATTCAAACTGTGATTGGATGCGTTTAAGGTTTGTGAATTACACCCCAAGTCCACCAAATGTAAATAGTATCTGCTATGCTTTTTAACTTTTTTATTTCCTGGTAATAAATATGTTTTTCTGTACATCCA

Function

symbol description
gnb1l Orthologous to human GNB1L (G protein subunit beta 1 like).

NR:

description
guanine nucleotide-binding protein subunit beta-like protein 1

GO: NA

KEGG:

id description
K24732 GNB1L; guanine nucleotide-binding protein subunit beta-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980002.1 False 2020 mRNA 0.52 7 35787045 35815869
XM_036980003.1 False 2192 mRNA 0.52 8 35787052 35815869
XM_036980004.1 False 2156 mRNA 0.52 8 35787052 35815869
XM_036980005.1 True 1973 mRNA 0.52 7 35787056 35815869

Neighbor

gene id symbol gene type direction distance location
txnrd2.2 txnrd2 coding upstream 19099 35743748 ~ 35767946 (+)
LOC110525852 arvcf coding upstream 47005 35506440 ~ 35740040 (+)
LOC110526892 NA coding upstream 351240 35429521 ~ 35435805 (+)
LOC110525848 zdhhc8 coding upstream 372009 35334881 ~ 35415036 (+)
LOC110525846 LOC106585087 coding upstream 468050 35306866 ~ 35318995 (+)
LOC110525856 LOC106585097 coding downstream 252899 36068768 ~ 36124738 (+)
LOC110525857 LOC106585098 coding downstream 311176 36127045 ~ 36140318 (+)
LOC110525858 LOC106585100 coding downstream 344402 36160271 ~ 36198750 (+)
LOC110525861 LOC106585102 coding downstream 388023 36203892 ~ 36213876 (+)
LOC110525859 LOC106585101 coding downstream 398034 36213903 ~ 36274948 (+)
G501145 NA non-coding upstream 15228 35771615 ~ 35771817 (+)
G500285 NA non-coding upstream 199286 35546592 ~ 35587759 (+)
G500225 dgcr8 non-coding upstream 344846 35441415 ~ 35442199 (+)
G500220 ranbp1 non-coding upstream 357676 35423381 ~ 35429369 (+)
G500127 NA non-coding upstream 367021 35418917 ~ 35420024 (+)
G501151 NA non-coding downstream 737 35816606 ~ 35818595 (+)
G501182 NA non-coding downstream 37767 35853636 ~ 35925266 (+)
G501325 NA non-coding downstream 131407 35947276 ~ 35947476 (+)
G501353 NA non-coding downstream 164354 35980223 ~ 35980435 (+)
G501357 NA non-coding downstream 166449 35982318 ~ 35982550 (+)
G499111 NA other upstream 1635308 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 2321990 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 2466697 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 2622784 33135282 ~ 33165186 (+)
polk polk other upstream 2858194 32926258 ~ 32936958 (+)
fancc fancc other downstream 3454090 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 3858143 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 3918915 39734703 ~ 39750180 (+)
G505988 NA other downstream 4146783 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 4380931 40196800 ~ 40203886 (+)

Expression


Co-expression Network