LOC110525874 (LOC106585113)


Basic Information

Item Value
gene id LOC110525874
gene name LOC106585113
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 36776871 ~ 36780823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606353.2
CTCGTCCTTAGATCTTTAGTATGTGAAATGAGCATGGTACTAGCTGTTGTGTGAacggagagagacagtgggacaTCGACGGAGCAGCCTGACCATATCCTCTACGACGATATTCGATTTAGTCCTTTTTTATTCTGTTCTTGTGATAACTGACTACTGATGATCTTTCTGCTCCATTCCAAGGAAAGTATTTTGAAGGGACAGAAGAGCGGATCAAGGAATGATGACATTTGAGATAAATCTTCCTCTTTAAAGAAAATAATTTGATCTGATTCAGGGAACCCATGCTAGCGTTGGTATATTTGGATTAAACAAACCGGGTACTAATCATTGATTATTGATTTTCGCATAATACGGTGTGTACATAAATGTATTTCGACTTGCACCTACACGTTCGCTGCCCTCGCCTGAACTCTGCGCCGCCTCGATCCAGATGAACGGTTCTCCCCACGGATCTGAAGCGCATTTACGCAGTCCGTCCCCCGAGCGCACCGGTAACAACAGCGGTAATTCACCCCAGAGAGGAGCGAAAAGACCGCTGGTTTCCGTACCTTCTCCCTCAGATCCAACACGCCAGGCTAAAAGGCTGCCCATTCGGATTCTAAAGATGTTGAGCGCACACAGCAGCCACTTGCTACACCCGGAATATCTCCAACCCCTGACGTCCGCGCCAGTGAGCATTGAGCTGGATGCTAAGAAGAGTCCCCTGGCCCTGCTGGCTCAGACCTGCTCTCAGATTGGCAAACCAGACCCCCCGTCCTCGTCCAAACTGGGCTCCCTCTCCTCCGGCAGCCTCAGTGACAAGGACTCATCCGGACGCTCCTCCTGCTCCGGCCACAAGTCTGGAGACCAGCATCAGTCTCTGGAGGATAAGTCTAGCTTCAAGCCTTACAACAAGGCCGGAGGGGAATGCCGCAAGGATGGGCTGTTGACCAAGGGTGCTACAGACAAAGCTGGCTTCAGAGTGCCCAGTGGTGGATCCGGGAGCGGCGGCTCTTGCCCTTCCTTCCCCCCacactccacctctcctagctctaGCTCCCCTCCCCTGCACTCCCAGGGCCAGTCCCACAGACAGACCCAGTCCCCCTCCACGCAGCAGCAGACATCACACTCTCAGGCCCTGCACATGGACAAAAAGCCTGTGAGCTCAGACCAGGCCAGCTCAGACAGCAACAGCAGCACAGGGAAGAAAGACTCTGATCACAGCAAGGAGAGGCTGGATGGGGCCCAGCTAGCAAACTCCAGTCACATGCGGGCTAGCGCCAACTCCAGCAATGCCAGCTCCGCTAGCAGCCCGCGGCCGGATAGCAAGGCTGACCCACAGTCCTCTCAGCCTGGGCTAGGCTCCGGACACATcgcccctgtctcccccttcaaACCAGGACACTCCGTATTCCCCATGCCCCCCGCCTCCATGGGCTACCATGGCTCCATAGTGGGCGCCTATGCAGGCTACCCCTCTCAGTTCCTGGATCATACCAAGTCTAGTCTAGGGATGGGGATCCCAGGGAAGCACCCTGGCTCCAGCCCCCTCACCGGGGCCTCACCTCCATCCCTCATGCAGGGTCTATGCAGGGACCCATACTGTCTGACCTATCCCAACCACCCCCATCTAGGGGGCAGCAACTGCAATACGTGTGTCCACGACCCCTCCTCCCTAAAATCAGGTTTCCAAATCATGTATCCGTCTCACCACCTCCACTCCCTCCACCCCAGTTCTCTATCCTCCACCACCCCCACCCTGTCCCACCCGCTCTACACCTACGGCTACATGCTGCAGAACGAGCCCCAGCCACACGCCTGTAACTGGGTGTCAGTAGGAGGGCCGTGTGACAAACGTTTCTCCACGTCAGAGGAGCTGCTGGCCCACCTGCGTACTCACACAGCTCTCTCTGGTGGGCTGGACAGTAAGCTCCTCTCTGCCtacccctcctctgtctcctcagcCGCCTCCTGTCACCTCCACCTTCCTCAGCCCGGCAGCCCTGGCACCATGCCCAGCTCCTTCTCTCTGCGGGGGTCACCTGGCTTAGGCCTGGCCCGCTACCACCCCTACACCAAGGCCCACCTGCCAGGAGCCCCAGGCCTGTCCATGCATTCTCTACAGGCCTCCTCGCCCTACTACTCCCCCTATGCCCTCTACAGCCAGAGACTGGGCTCAGCCTCTGCCCTGGGCTACCAGTGATGTCTGAGGACACAGAGACAACAGAACAGGCACCTCAGACATGCACAGTGGATGGATGAACCAGGCCCCGTCTGGACAGGAGGGGTCTTTGCCAGTCACTACAACAAGGGGGCCTCACCCTGCCTGCCTGGAATACCACCTGTTGCCACAGGATTCTGAATGGCATTGCAATGGCAAGAGACCCAGTGGTGATGGCTGGCCAGCAGTACAGGCCCAGAGACATTGGTGTGTGGGCCAGACACCTGCCTGGGAACAGAAAGGAGCTTGAATTTGATTGGATGAGATGGTGGAATTTAGATTGTTTTTTGATTTTAgattatgattttttttcccGCTCCCTCCTAGGAATGAAAACGTGTATTTATTTTTCACTTGAGCGCTTGGCATTCAAAATGGGGGAAGTTTTACTATCCAAATTAATTGTTCATAAATATTCGAATAGAAAAAAATGATTTGAATCATAGCATTATGTCTATCGTACACTCTTTAAATAAAGTTTTGCACCATGGCAAAGATGGACTGATGGTTTTTTTTCTGGAGGAACAAGCCTACTTTTTTTTTGACATTTCTTCTGTATCTTTCCATTTCCACTATTCTTTTCCCCATCTGCTATTCACACTCTGAGGGAGTATCGCATGTCCTGACGGTGAAAGTCTCCTTGATAAATTGCCATTTATTTTCTATTCGTAAGCAGAGATGTCATATTTTTTCAAAGTGTTATTGTGTGAGCCCGTTGGGGTTGCCGACTGTCATTGAAAGAGGACGGGATTAAATCAAACAAAAATGAATACACAACGATGGCAGTGCTATGCATCTGACAGGGAAATGTCTTATTTTCTTTAATAAATCATACTTGATTGCA

Function

NR:

description
zinc finger protein 703

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606353.2 True 3050 mRNA 0.53 2 36776871 36780823

Neighbor

gene id symbol gene type direction distance location
LOC110525872 LOC106585112 coding downstream 12774 36748519 ~ 36764097 (-)
LOC110525871 LOC106585111 coding downstream 30336 36740816 ~ 36746535 (-)
hk2 LOC106585103 coding downstream 207728 36507843 ~ 36569143 (-)
LOC118965023 NA coding downstream 816575 35956499 ~ 35960296 (-)
LOC110525855 LOC106585096 coding downstream 945732 35821517 ~ 35831139 (-)
LOC118965024 NA coding upstream 73565 36854388 ~ 36858232 (-)
LOC110525875 LOC106585114 coding upstream 170683 36951506 ~ 36969236 (-)
LOC110525876 LOC106585115 coding upstream 189245 36970068 ~ 36987765 (-)
trnag-ccc-2 NA coding upstream 207202 36988025 ~ 36988095 (-)
vamp5 LOC106585117 coding upstream 256616 37037439 ~ 37047277 (-)
G502219 NA non-coding downstream 65625 36710322 ~ 36711246 (-)
G502230 NA non-coding downstream 115553 36647386 ~ 36661318 (-)
G502204 NA non-coding downstream 122372 36653717 ~ 36654499 (-)
G502192 NA non-coding downstream 132232 36640815 ~ 36644639 (-)
G502208 addb non-coding downstream 174797 36601014 ~ 36602074 (-)
G502327 NA non-coding upstream 48656 36829479 ~ 36829839 (-)
G502364 NA non-coding upstream 100601 36881424 ~ 36881713 (-)
G502372 NA non-coding upstream 105646 36886469 ~ 36886815 (-)
G502374 NA non-coding upstream 106850 36887673 ~ 36887896 (-)
G502376 NA non-coding upstream 110581 36891404 ~ 36891637 (-)
G501142 NA other downstream 1008942 35765366 ~ 35767929 (-)
G498960 NA other downstream 2735697 34040359 ~ 34041174 (-)
LOC110525812 LOC103397138 other downstream 3440091 33332650 ~ 33336818 (-)
G498484 rpl6 other downstream 3446367 33327507 ~ 33330504 (-)
vamp8 LOC106585118 other upstream 269880 37050701 ~ 37065030 (-)
G503064 NA other upstream 459021 37239844 ~ 37240937 (-)
G503159 LOC106580514 other upstream 550661 37331484 ~ 37336552 (-)
nsmfb nsmf other upstream 2174047 38926899 ~ 38967540 (-)
G505472 NA other upstream 2425055 39205878 ~ 39206269 (-)

Expression


Co-expression Network