ptch1 (ptch1)


Basic Information

Item Value
gene id ptch1
gene name ptch1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39155476 ~ 39234874 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980081.1
ACCTCTCCAACACTTAGCAGAATGCCTGCAACCAAGACGGTCGGATAAGGATTACGGCGCGCCTGGCTCTTTTTCCCCCTGATGATAAAGAAAATATTTTCATATTCATCATAAGTAACAACTGTCGGAGTCGGAGGCGGATATTATTGGTTTCTCCAGACCGTTTTCCCCTGGATAGAATATGGGGAAGGCGACTGGAAGAAAAGCACCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTGTTTAAGTTGGGCTGTTACATACAAAAGAACTGCGGAAAGTTTTTGGTTGTGGGCCTCTTGATATTCGGAGCTTTCGCTGTTGGCTTACGGGCGGCGAATCTGGAAACCGACGTGGAGAAACTCTGGGTAGAAGTGGGCGGCAGGGTGAATCAGGAGCTGAAGTACACGCGTCAGAAGATGGGCGAGGAGGCCATGTTCAGTCCCCAGCTGATGATCCAGACGCCGCGGCAGGAGGGCGCTAACGTGCTCACTGTGGAGGCGCTGCAACAGCACCTGGATTCAGCTATCAGGGCCAGCCGAGTGCACGTTTACCTCTTTaacagACAATGGAAATTGGAACATTTATGCTACAAATCAGGAGAACTTGTTACCGAAGCTCATTTTATGGACCAGATTATTGAGAAGCTGCACCCCTGTCTCATCATCACGCCCCTGGACTGTTTCTGGGAGGGAGCCAAGCTCCAGTCTGGAATGTTCTACCTCCCTGGAAAGCCCCCTCTGCAGTGGACCAACTTTGACCCCAAGGAGTTCCTGACGGAGCTGCGGACTCTGAAGTTCCAggtggacagctgggaggagatgcTGGAGAAGGCTGACGTGGGACACGGCTACATGGACCGACCCTGTCTCAACCCCCAAGACCCCGACTGTCCCCTCACGGCTCCCAACAAGAACACcaccaagccctTTGACGTGGCTCGCGTCCTGACTGGCGGATGCCATGGCCTCTCCAGGAAGTACATGCACTGGCAGGAAGAGCTGATCGTAGGGGGGACCACCAAGAATGGCACTGGACCACTACTCAGtgcCCAGGCATTACAGACCATGTTCCAGCTGATGACTCCTAAGCAGATGTTTGAGCACCTGAAGGGTTATGAAGAGGTGTCCCATATCAACTGGAACCAAGACAAGGCTGCAGCCATACTGGAGGCCTGGCAGAGGAAATACTCAGAggcagtACAGCAGAGTGTAGCCGTCAACTCATCTCAGAAGGTGTTGTCGTTTACCACCACCACTCTGGAAGACATCCTCAAGTCTTTCTCTGATGTCAGCGTCATACGAGTGGCCAGCGGCTACCTGCTGATGTTGGCCTATGCGTGTCTGACCATGCTACGTTGGGACTGTGCTAAGTCTCAGGGAGCTGTAGGACTGGCCGGTGTCCTGTTGGTGGCGCTGTCTGTGGCTGCAGGCCTGGGGCTCTGCTCTCTGTTGGGCATATCCTTCAACGCTGCCACCACACAGgtgcTACCATTCCTGGCACTGGGTGTGGGTGTGGATGATGTGTTTCTCCTGGCCCACGCGTTCAGTGAGACGGGACAGAACAAGAAGATCCCCTTTGAGGACCGTACAGGGGAGTGTTTGAAGAGGACAGGAGCAAGTGTAGCTCTCACCTCCATCAGTAACGTCACTGCCTTTTTCATGGCAGCCCTCATCCCAATACCTGCCCTACGAGCCTTCTCTCTgcagGctgcggtggtggtggtgtttaaCTTTGCCATGGTACTGCTCATCTTCCCTGCCATCCTCAGTATGGACCTGTATCGCAGAGAGGACCGGCGCTTTGACATCTTCTGCTGCttctacagCCCGTGTGCTAACAGGGTGATCCAGATCGAGCCCCAGGCTTACCTGGATGGAGCAGATGGCAGTCACTACAGCCCCCCTCCTACCTCCTTCcgcaccccccctccctcctacaGCAGCCATGGTTTCTCCCAGCAGACTCAGATCACCATGCAGTCTACCGTCCAGCTGAGGACAGAGTACGACCCCAGGACTCAGGCCTTCTACACTACGGCCGAACCCAGGTCCCAGATCTCCGTACAACCGTTTACACCCGCAGCCACTGGCCCCGCCAACAACCCCAACGCCAGTCACGGTGTTCATGGCAACAACAACCACCATAGCAACCATCACAGCCGGAGTGGGAGTAGCAGTAGTCACGGCAACCTGAACAACAACAACGGTGGGCGTGGTTCCGGCTCAGTCCCGTTCCCTCCTCCCCCGTCCTCCTCTGGCgttccccctgtctccccccaggcgggggagggggtgtgtgtgtcggGGGAGAGTGCCAGCTCCACCAGGGATCTGCTGTCCCAGTTTGGAGAGGCCTCTCTGGGGCTGCGCTGTCTGGAGCCCCCCTGCTCCCGATGGACCCTGGCCTCCTTCGCAGAGAAACACTACGCCCCCTTCCTACTGCAGCCCACCAccaaggTGGTAGTCATCCTGCTGTTCCTGGTCCTGCTGGGGGTCAGTCTGTACGGGACCACACGGGTACGGGACGGGCTGGAGCTGACCGACATCGTTCCCAGGGAGACCAGCGAGTACGACTTCATCGGGGCCCAGTTCAAGTTCTTCTCCTTCTACAACATGTACGTGGTGACCCAGCGAGCGGAGTACTCCCAGGCCCAGCCCCTGCTCTACCAGCTGCACTGTCGCTTCAACACGATCCGCTACGTACTGAGGGAGGACAACGGCCAGCTGCCACTCATGTGGCTCCACTACTTCAGGGACTGGCTGCAAGGTCTGCAGGCAGCATTTGATCAGGACTGGGAGGCGGGTCGGATCACACAGAGCAGCTACAGGAACGGTTCAGACGACGGGGTCCTGGCCTACAAACTACTGGTACAGACCGGGCGCAGGGACAAGCCCATCAACTTCAACCAGCTGACGAGGCAGCGCTTGGTGGATGCGGATGGCATCATCAACCCGGGGGCGTTTTACATCTACCTGACGGCGTGGGTCAGCAACGACCCGGTGGCGTACGCAGCCTCGCAGGCCAACATACGGCCGCACCCCCCGGAGTGGCTCCACGACCGCACAGACTCCATGCCCGAGACACGCCTCAGCAtTCCTGCCGCCGAGCCCATCGAATATGCACAGTTTCCCTTCTACCTCAACGGGCTCCGCGAGACCCCCCAGTTTGTGGAGGCCATTGAGTCGGTGCGGGCCATCTGCAGTAACTACAGCCGCCAGGGCCTGCCCAGCTACCCCAACGGCTACCCCTTCCTCTTCTGGGAGCAGTACGTAGGCCTCAGACACTGGCTGCTGCTCTCCATCAGCGTGGTGCTAGCCTGCACCTTCCTCGTCTGTGCCCTCTTCCTGCTCAACCCCTGGACCGCCGGTATCATcGTCCTGGTCCTCTCTCTGATGACCGTGGAGCTGTTTGGTATGATGGGGCTGATAGGGATCAAGCTCAGTGCTGTTCCTGTGGTCATCCTCATCGCCTCTGTGGGCATCGGAGTAGAGTTTACTGTCCATGTGGCTctggcatTCCTCACAGCGATAGGGGACCGTAACAGGCGGGCAGTGCTGGCGTTAGAACACATGTTTGCTCCGGTTTTGGACGGAGCCTTCTCTACTCTACTAGGAGTCCTCATGCTAGCAGGCTCCGAGTTTGACTTCATCGTCAGGTATTTCTTTGCTGTGCTGGCCATCCTGACAGTTCTGGGGGTGCTGAATGGTTTGGTCCTTCTTCCTGTGTTGCTGTCCTACTTCGGCCCCTATCCAGAGGTGACCCCTGTGGATGGGCGTAGCCAGTTACCCACCCCTTCCCCGGAGCCTCCTGCTCACGTGGTGCGCTTCTCAGTCCACCCACGCCACACCACCTCCGGCACGGGGACAGGAACGGGCTCTGACTCGTCCGACTCTGAGTACAGCTCCAACACCACGGTATCAGGCATCAGCCAGGAGATGCAGCAGTACGACCTCCCTGCCACTAGGGGCAGAGCTGGGAgaacagaggacatgcagtacgGCATCCAGATCAGCAGGGGCAGAGCTGTTAGAACAGAGGAGGTGCGACTAGGAGCAGGGCCAAGAAGGACAGCTAGACAAGGAGACGCCACAGCCTACTCTGTGTCTTCTTCGGTCCTGCCGGAGTCAGGGGCCCACCCTGGTGCATCCCGTCGCTTCAGCAAAAGGGACCTACAGTCGCTGCCCCCAGCACGCCCGCGCATGGACGCTTTTGAAACTGCTACTGAGGCCGGAGGCCATTACAGCTCCGGAAGCCATTTTGGCTCGGGCGGCCACAGAGAACGCTCCGCGGGGCACAGGACCCGTCCATCCCACAACCCCCGGCCCAATCACCACCaacctcaccaccctaaccctaaccccgccCCTACTTACTGTCAGCCAATCACCACGGTAACGGCCTCTGCGTCGGTTACCGTCGCCGTCCACTCTGCCCCTCCCCCCACTCAGAGCCCCACATCCTCTTACCCAGGACACACTGCAGCAAACAGTTACCACACAGCAGGCGGCGCAGAGCCGGTGCCTGCCTTCCAGGACCCCCATGTGCCACTGGAGGTCCATATCAGCCGCAGAGGAACCAAGATGGAGGCCATGGAGCTCCAGGATGTGGAGTGTGAGGCAGCTGAGAGCGACAGTGGCAAGAGGGCAAGCTGAGTGGAGGAGAGCAGAAGTACAACGGCCAAAGATggactccctctctcactcagcGGCCCACAGCGCAGCGACACACAGAACCCAGTGGTGGCTAGCGCCCTTGGTGCTCAATCTGACTGGAACCCAGTGGATGTTTGTTTCAGATATCTCTATCCATATTTAAAAGATGTACACTCATGTAAATATGAAAACAAAAATAGCTATAATTTAGGAGCTGTTCAACTCCTTTTTTAACAGACTGGGGACGTCATTTtgtatggcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaatctcTGATTACTGTTCACTCATCTGTGGATCTGGGCCATGAGGAAACTTCATCTGGACAATACATTTCAGCATTCATTGTTGCTGCTTACGATATTTCGGTAGTGATGTATGATAACTGTGTACATTAACTTGTATAATAATTCTATGCAAATGTTTCTTTTACATTATAAAAGAGGTGAGCGAGTGTGCAAAGGTGATTGCGTGTTTGCGTGCGTGGGTAAATGATCAGATCCACCTCTCAAGAAATAGGCTAACGATCACGTCATGTGAAGCGTTTACACAATAACTACACGGagattgtgtgtgtacgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtttgtgtataaaggtccgtttttttttttttttttacgattaATTTGCTTATCACAAACCTGTGGTAGTTATGAAACAATTACTGTTGAACTCTGACTCACGCTATGCGTGCTATTTAAGACGAGCAGATTATGAAGAAGATATGCAGCTGTGTTGTTTGTGACTCTCCCTGCGTAGTAGCTTCCGCATCGTCTCTGCTCTGAGCTCTTGTGTTGCTGTCTGGTTGTCTGGGGATTGTTTTACTGTAAAAAGGCCATGTGTGCCTTGGCTGTCCCTCGGACTCAATTGCCCATCTCCCCTTTTCTCTGGTGATGTCATAGCTCTCGGCAGCCATCTTATAGTAGCATGAGAGGGCGTGAAAGTATCACTCCCGTAGCTAATGCATATTACAGTTGGAGTAGAAAATCCATGGTAGCTAGTCAAAGCCATTATGGAGGatatttttttccttcttttttttctgTCTCGTGAATGCAACTTCTGTTATTCTAACTGTAAATATACAGTTTtcgtcaacagtttggacacacctactcattcaaggattttctttatttgtactattttctacatttgagATAAATAGGGATACATCCAAAcggtgaaataacacatatggaatcacgtagtaactcaaaaagggttaaacaaatccaaatatatttgagattcttcaaagtagccaccctttgccctgacagcttttcacactcttggcattctctca
>XM_036980080.1
ACAAGCTGAATACTTCGCATTGGAAGTGTGTTTTCTTCAAGAAATGCTGCTTCAAGAAATGCAGTTCCTTTTTGAAAACGACAAGCTCCTGTCTTGGTTGCGCGCAAACGCACAAGAGGGCTGGATTTCTGAAAGGCTCCCCTGAAGTTTGCGATGCACACACGAGGGTTGTCGGCTTGGGTGGTCGCTCTACTTTAGTGAGCTGTTGCTAAGCAGCTAATAATAGTCGTGTTTTCTGAGTAATTTTTGCCCTTCTGGAACCAATCAGATGCGAGAAATTCCGGCCATCTGACAGCCCTGGAGGCGGGATTTCGATTCCTTTAGCTtttacccctcctcctctgtctccaaaTGGAGAGTGGTCTTTTTTCTCATCTATTGAATCTCAGAGTTTGCCGTGTTGCGCGGCCCAAGGGAAGAccacatagaacacacagaatGCTACGACCATCGAACGTTCCAAGCGGCAGTTTTGTAGATGGGAATCGATGTTTCCACTTTGCCTTTTAAGATAAATAACTTTTTTGAAGGGAAACGGTGAATGTGCGAAGCGGTGGAGACCTCCGGATCACGAAATGTTGGGATGGAAGGTGCAGACTTTGACTCGCCGTCTCCAACAGGAGTATGAAGTACTTTACGGGTGTGAGATCACCGAGAGTGAAACTTTGTTGCCTTGGGACATTACTACACGCTTTCGGGGAAATATTATAACGTGTAATAGCGCGAAGTCTCCGCAACATGGCCTCGGCTGCTAATGCCTCCTCCGAGCAGGAAAACAGGGACCCCGATCGGCCGAGGATAACGCGGAGGAACAGGGGGAACTATCGCACAACAGCGCCGGATTTGGAGTATTTGCAGCGACCAAGTTACTGCGATGCAGCTTTCGCCTTGGAGCAAATATCCGAGGGGAAGGCGACTGGAAGAAAAGCACCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTGTTTAAGTTGGGCTGTTACATACAAAAGAACTGCGGAAAGTTTTTGGTTGTGGGCCTCTTGATATTCGGAGCTTTCGCTGTTGGCTTACGGGCGGCGAATCTGGAAACCGACGTGGAGAAACTCTGGGTAGAAGTGGGCGGCAGGGTGAATCAGGAGCTGAAGTACACGCGTCAGAAGATGGGCGAGGAGGCCATGTTCAGTCCCCAGCTGATGATCCAGACGCCGCGGCAGGAGGGCGCTAACGTGCTCACTGTGGAGGCGCTGCAACAGCACCTGGATTCAGCTATCAGGGCCAGCCGAGTGCACGTTTACCTCTTTaacagACAATGGAAATTGGAACATTTATGCTACAAATCAGGAGAACTTGTTACCGAAGCTCATTTTATGGACCAGATTATTGAGAAGCTGCACCCCTGTCTCATCATCACGCCCCTGGACTGTTTCTGGGAGGGAGCCAAGCTCCAGTCTGGAATGTTCTACCTCCCTGGAAAGCCCCCTCTGCAGTGGACCAACTTTGACCCCAAGGAGTTCCTGACGGAGCTGCGGACTCTGAAGTTCCAggtggacagctgggaggagatgcTGGAGAAGGCTGACGTGGGACACGGCTACATGGACCGACCCTGTCTCAACCCCCAAGACCCCGACTGTCCCCTCACGGCTCCCAACAAGAACACcaccaagccctTTGACGTGGCTCGCGTCCTGACTGGCGGATGCCATGGCCTCTCCAGGAAGTACATGCACTGGCAGGAAGAGCTGATCGTAGGGGGGACCACCAAGAATGGCACTGGACCACTACTCAGtgcCCAGGCATTACAGACCATGTTCCAGCTGATGACTCCTAAGCAGATGTTTGAGCACCTGAAGGGTTATGAAGAGGTGTCCCATATCAACTGGAACCAAGACAAGGCTGCAGCCATACTGGAGGCCTGGCAGAGGAAATACTCAGAggcagtACAGCAGAGTGTAGCCGTCAACTCATCTCAGAAGGTGTTGTCGTTTACCACCACCACTCTGGAAGACATCCTCAAGTCTTTCTCTGATGTCAGCGTCATACGAGTGGCCAGCGGCTACCTGCTGATGTTGGCCTATGCGTGTCTGACCATGCTACGTTGGGACTGTGCTAAGTCTCAGGGAGCTGTAGGACTGGCCGGTGTCCTGTTGGTGGCGCTGTCTGTGGCTGCAGGCCTGGGGCTCTGCTCTCTGTTGGGCATATCCTTCAACGCTGCCACCACACAGgtgcTACCATTCCTGGCACTGGGTGTGGGTGTGGATGATGTGTTTCTCCTGGCCCACGCGTTCAGTGAGACGGGACAGAACAAGAAGATCCCCTTTGAGGACCGTACAGGGGAGTGTTTGAAGAGGACAGGAGCAAGTGTAGCTCTCACCTCCATCAGTAACGTCACTGCCTTTTTCATGGCAGCCCTCATCCCAATACCTGCCCTACGAGCCTTCTCTCTgcagGctgcggtggtggtggtgtttaaCTTTGCCATGGTACTGCTCATCTTCCCTGCCATCCTCAGTATGGACCTGTATCGCAGAGAGGACCGGCGCTTTGACATCTTCTGCTGCttctacagCCCGTGTGCTAACAGGGTGATCCAGATCGAGCCCCAGGCTTACCTGGATGGAGCAGATGGCAGTCACTACAGCCCCCCTCCTACCTCCTTCcgcaccccccctccctcctacaGCAGCCATGGTTTCTCCCAGCAGACTCAGATCACCATGCAGTCTACCGTCCAGCTGAGGACAGAGTACGACCCCAGGACTCAGGCCTTCTACACTACGGCCGAACCCAGGTCCCAGATCTCCGTACAACCGTTTACACCCGCAGCCACTGGCCCCGCCAACAACCCCAACGCCAGTCACGGTGTTCATGGCAACAACAACCACCATAGCAACCATCACAGCCGGAGTGGGAGTAGCAGTAGTCACGGCAACCTGAACAACAACAACGGTGGGCGTGGTTCCGGCTCAGTCCCGTTCCCTCCTCCCCCGTCCTCCTCTGGCgttccccctgtctccccccaggcgggggagggggtgtgtgtgtcggGGGAGAGTGCCAGCTCCACCAGGGATCTGCTGTCCCAGTTTGGAGAGGCCTCTCTGGGGCTGCGCTGTCTGGAGCCCCCCTGCTCCCGATGGACCCTGGCCTCCTTCGCAGAGAAACACTACGCCCCCTTCCTACTGCAGCCCACCAccaaggTGGTAGTCATCCTGCTGTTCCTGGTCCTGCTGGGGGTCAGTCTGTACGGGACCACACGGGTACGGGACGGGCTGGAGCTGACCGACATCGTTCCCAGGGAGACCAGCGAGTACGACTTCATCGGGGCCCAGTTCAAGTTCTTCTCCTTCTACAACATGTACGTGGTGACCCAGCGAGCGGAGTACTCCCAGGCCCAGCCCCTGCTCTACCAGCTGCACTGTCGCTTCAACACGATCCGCTACGTACTGAGGGAGGACAACGGCCAGCTGCCACTCATGTGGCTCCACTACTTCAGGGACTGGCTGCAAGGTCTGCAGGCAGCATTTGATCAGGACTGGGAGGCGGGTCGGATCACACAGAGCAGCTACAGGAACGGTTCAGACGACGGGGTCCTGGCCTACAAACTACTGGTACAGACCGGGCGCAGGGACAAGCCCATCAACTTCAACCAGCTGACGAGGCAGCGCTTGGTGGATGCGGATGGCATCATCAACCCGGGGGCGTTTTACATCTACCTGACGGCGTGGGTCAGCAACGACCCGGTGGCGTACGCAGCCTCGCAGGCCAACATACGGCCGCACCCCCCGGAGTGGCTCCACGACCGCACAGACTCCATGCCCGAGACACGCCTCAGCAtTCCTGCCGCCGAGCCCATCGAATATGCACAGTTTCCCTTCTACCTCAACGGGCTCCGCGAGACCCCCCAGTTTGTGGAGGCCATTGAGTCGGTGCGGGCCATCTGCAGTAACTACAGCCGCCAGGGCCTGCCCAGCTACCCCAACGGCTACCCCTTCCTCTTCTGGGAGCAGTACGTAGGCCTCAGACACTGGCTGCTGCTCTCCATCAGCGTGGTGCTAGCCTGCACCTTCCTCGTCTGTGCCCTCTTCCTGCTCAACCCCTGGACCGCCGGTATCATcGTCCTGGTCCTCTCTCTGATGACCGTGGAGCTGTTTGGTATGATGGGGCTGATAGGGATCAAGCTCAGTGCTGTTCCTGTGGTCATCCTCATCGCCTCTGTGGGCATCGGAGTAGAGTTTACTGTCCATGTGGCTctggcatTCCTCACAGCGATAGGGGACCGTAACAGGCGGGCAGTGCTGGCGTTAGAACACATGTTTGCTCCGGTTTTGGACGGAGCCTTCTCTACTCTACTAGGAGTCCTCATGCTAGCAGGCTCCGAGTTTGACTTCATCGTCAGGTATTTCTTTGCTGTGCTGGCCATCCTGACAGTTCTGGGGGTGCTGAATGGTTTGGTCCTTCTTCCTGTGTTGCTGTCCTACTTCGGCCCCTATCCAGAGGTGACCCCTGTGGATGGGCGTAGCCAGTTACCCACCCCTTCCCCGGAGCCTCCTGCTCACGTGGTGCGCTTCTCAGTCCACCCACGCCACACCACCTCCGGCACGGGGACAGGAACGGGCTCTGACTCGTCCGACTCTGAGTACAGCTCCAACACCACGGTATCAGGCATCAGCCAGGAGATGCAGCAGTACGACCTCCCTGCCACTAGGGGCAGAGCTGGGAgaacagaggacatgcagtacgGCATCCAGATCAGCAGGGGCAGAGCTGTTAGAACAGAGGAGGTGCGACTAGGAGCAGGGCCAAGAAGGACAGCTAGACAAGGAGACGCCACAGCCTACTCTGTGTCTTCTTCGGTCCTGCCGGAGTCAGGGGCCCACCCTGGTGCATCCCGTCGCTTCAGCAAAAGGGACCTACAGTCGCTGCCCCCAGCACGCCCGCGCATGGACGCTTTTGAAACTGCTACTGAGGCCGGAGGCCATTACAGCTCCGGAAGCCATTTTGGCTCGGGCGGCCACAGAGAACGCTCCGCGGGGCACAGGACCCGTCCATCCCACAACCCCCGGCCCAATCACCACCaacctcaccaccctaaccctaaccccgccCCTACTTACTGTCAGCCAATCACCACGGTAACGGCCTCTGCGTCGGTTACCGTCGCCGTCCACTCTGCCCCTCCCCCCACTCAGAGCCCCACATCCTCTTACCCAGGACACACTGCAGCAAACAGTTACCACACAGCAGGCGGCGCAGAGCCGGTGCCTGCCTTCCAGGACCCCCATGTGCCACTGGAGGTCCATATCAGCCGCAGAGGAACCAAGATGGAGGCCATGGAGCTCCAGGATGTGGAGTGTGAGGCAGCTGAGAGCGACAGTGGCAAGAGGGCAAGCTGAGTGGAGGAGAGCAGAAGTACAACGGCCAAAGATggactccctctctcactcagcGGCCCACAGCGCAGCGACACACAGAACCCAGTGGTGGCTAGCGCCCTTGGTGCTCAATCTGACTGGAACCCAGTGGATGTTTGTTTCAGATATCTCTATCCATATTTAAAAGATGTACACTCATGTAAATATGAAAACAAAAATAGCTATAATTTAGGAGCTGTTCAACTCCTTTTTTAACAGACTGGGGACGTCATTTtgtatggcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaatctcTGATTACTGTTCACTCATCTGTGGATCTGGGCCATGAGGAAACTTCATCTGGACAATACATTTCAGCATTCATTGTTGCTGCTTACGATATTTCGGTAGTGATGTATGATAACTGTGTACATTAACTTGTATAATAATTCTATGCAAATGTTTCTTTTACATTATAAAAGAGGTGAGCGAGTGTGCAAAGGTGATTGCGTGTTTGCGTGCGTGGGTAAATGATCAGATCCACCTCTCAAGAAATAGGCTAACGATCACGTCATGTGAAGCGTTTACACAATAACTACACGGagattgtgtgtgtacgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtttgtgtataaaggtccgtttttttttttttttttacgattaATTTGCTTATCACAAACCTGTGGTAGTTATGAAACAATTACTGTTGAACTCTGACTCACGCTATGCGTGCTATTTAAGACGAGCAGATTATGAAGAAGATATGCAGCTGTGTTGTTTGTGACTCTCCCTGCGTAGTAGCTTCCGCATCGTCTCTGCTCTGAGCTCTTGTGTTGCTGTCTGGTTGTCTGGGGATTGTTTTACTGTAAAAAGGCCATGTGTGCCTTGGCTGTCCCTCGGACTCAATTGCCCATCTCCCCTTTTCTCTGGTGATGTCATAGCTCTCGGCAGCCATCTTATAGTAGCATGAGAGGGCGTGAAAGTATCACTCCCGTAGCTAATGCATATTACAGTTGGAGTAGAAAATCCATGGTAGCTAGTCAAAGCCATTATGGAGGatatttttttccttcttttttttctgTCTCGTGAATGCAACTTCTGTTATTCTAACTGTAAATATACAGTTTtcgtcaacagtttggacacacctactcattcaaggattttctttatttgtactattttctacatttgagATAAATAGGGATACATCCAAAcggtgaaataacacatatggaatcacgtagtaactcaaaaagggttaaacaaatccaaatatatttgagattcttcaaagtagccaccctttgccctgacagcttttcacactcttggcattctctca

Function

symbol description
ptch1 Predicted to enable hedgehog family protein binding activity; hedgehog receptor activity; and smoothened binding activity. Acts upstream of or within several processes, including cardioblast differentiation; intramembranous ossification; and negative regulation of smoothened signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including cranium; digestive system; epithelium; mesenchyme; and nervous system. Human ortholog(s) of this gene implicated in basal cell carcinoma; holoprosencephaly; holoprosencephaly 7; and nevoid basal cell carcinoma syndrome. Orthologous to human PTCH1 (patched 1).

NR:

description
protein patched homolog 1

GO: NA

KEGG:

id description
K06225 PTCH1; patched 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980081.1 False 6048 mRNA 0.54 24 39155476 39234874
XM_036980080.1 True 6770 mRNA 0.54 24 39158478 39234874

Neighbor

gene id symbol gene type direction distance location
hsd17b3 hsd17b3 coding upstream 87086 39042158 ~ 39068390 (+)
LOC110525918 LOC106585148 coding upstream 120282 39033662 ~ 39035194 (+)
zgc:162952 LOC100195200 coding upstream 263245 38865594 ~ 38892231 (+)
b3galt8 LOC106585144 coding upstream 294479 38858009 ~ 38860997 (+)
LOC110525909 LOC100380751 coding upstream 298029 38746654 ~ 38857447 (+)
fancc fancc coding downstream 35041 39269915 ~ 39312098 (+)
trnaa-ugc-17 NA coding downstream 53715 39288589 ~ 39288662 (+)
LOC110525923 NA coding downstream 167663 39402537 ~ 39405261 (+)
cbwd cbwd1 coding downstream 286849 39521723 ~ 39526646 (+)
foxd5 LOC106584956 coding downstream 299062 39533936 ~ 39535789 (+)
G505180 NA non-coding upstream 32897 39122359 ~ 39122579 (+)
G504905 ercc6l2 non-coding upstream 60658 39093925 ~ 39094818 (+)
G504886 NA non-coding upstream 69464 39084917 ~ 39086012 (+)
G504903 NA non-coding upstream 72380 39082884 ~ 39083096 (+)
G504896 NA non-coding upstream 95851 39059322 ~ 39059625 (+)
G505206 NA non-coding downstream 78276 39313150 ~ 39315080 (+)
G505314 NA non-coding downstream 135546 39370420 ~ 39370649 (+)
G505316 NA non-coding downstream 136536 39371410 ~ 39371666 (+)
G505329 NA non-coding downstream 153887 39388761 ~ 39389035 (+)
G505347 NA non-coding downstream 181992 39416866 ~ 39417144 (+)
G499111 NA other upstream 5003739 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 5690421 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 5835128 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 5991215 33135282 ~ 33165186 (+)
polk polk other upstream 6226625 32926258 ~ 32936958 (+)
LOC110525927 smim15 other downstream 439138 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 499910 39734703 ~ 39750180 (+)
G505988 NA other downstream 727778 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 961926 40196800 ~ 40203886 (+)

Expression


Co-expression Network