pgm5 (LOC106585157)


Basic Information

Item Value
gene id pgm5
gene name LOC106585157
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39536644 ~ 39583427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606441.2
AGGCGGAAGAGAAGACTTGGCTTAATATTACATTAGCCTATCCAAAGCTCTCACTGCAAGTTTTCTGTGGCATGTGTTTAAAACCTACAGCAGGCCTATAACTAGCATATATCTCAAACCGAGTTTATAAGCCAAGGAATTTGTTGACGGGGATTTATCATCTTAATAGCCATCCCTCTGGAAAGCGCTGGTGTGCTGTCATTGCGTAAACGCATCCCCCACCTCCCTCGAAAGTGCTACTTCTGGAGGACTAGAGCGGACATCACTGGACGTCTCACCTCCCTAACACAGTCTGTCTCCTACATATGTTTGACTCTCCACCTCTATCCAGCCGACAGTGAGTCATCCCCGGTGTAGCCAGTCGACCCGCCACTCCCGGTGGGTTCTTGTGCGGAGGATGGAGACAAACCCCATTCCCGTGGTAACGGTCCAGACGAGCCCGTTTGATGACCAGCGGCCCGGTACTAACGGGCTGCGGCGGAAGACGGCTGTGTTCGAGGGCAAGAAGAACTACCTGCAGAACTACATCCAAAGTGTACTGTCGTCCATCGACCTGAGGGACCGCCAGGGATGCACGATGGTGGTGGGCAGCGACGGACGCTACTTCAGCCGAGCAGCCACCGAGATTATAGTTCAGATGGCCGCTGCCAACGGGATTGGTCGGCTGGTGATTGGACACAACGGTCTTCTCTCCACCCCTGCTGTGTCCTGCATCATCAGGAAGATCAAGGCTATTGGTGGAATCATCCTGACAGCCAGTCACAATCCAGGAGGCCCCGGGGGAGACTTTGGGGTCAAATTCAACGTGGCCAATGGAGGCCCGTCTCCAGACACGGTGATGGAGAAGATTGCCCAGGTGAGTAGGACCCTGGAGGAGTATGCCATATGTCCTGACCTCCGCATTGACCTGGCCAGGCTGGGACGCCACGACTTTGACCTGGAGAACAAGTTCAAACCCTTCAGAGTTGAGATAGTGGACTCGGTGGAGTTGTACCTCAACCTGCTGAGAACCATCTTTGACTTCAACGCCATCAAGAGCCTTCTGACAGGACCTGAACAGCTGAAGATACGCATAGACGCCATGAACGGAGTGATGGGTCTGTACGTGCGCCGTATCATGTGTGATGAGCTGGGGGCTCCTGCCAATGCGGCTGTCAACTGTGTCCCCATGGAGGACTTTGGGGGCCGGCCTCCAGAGCCCAACCTCACATACGCAGCCCCATTGGTTGATGCCATGAAGGGCGGAGACATTGGTTTCGGAGCTGCGTTCGATGCAGACGGGGACCGGTATATGATCCTGGGTGAGAATGGTTTCTTTGTGAACCCTTCAGACTCCTTGGCTGTTATGGCTGCCAACCTCTCCTGTATCCCCTACTTCAGACAGCTGGGACTAAAGGGCTTCGCTAGGAGTATGGCTACCAGCACTGCCCTCGACAGtgtggcCAAGGCCTTGAAGGTGGCTCTGTATGAGACTCCTACAGGCTGGAGGTTCTTTGGGAACCTGATGGACTCCGGGAGGTGCTCGCTCTGCGGAGAGGAGAGCTTCGGGACAAGTTCAGACCACATCCGTGAGAAGGACGGTCTGTGGTCGGTGCTGGTGTGGCTGTCCATGATGGCTGCCAGGAAACAGGGCGTGGATGAGATCGTCAAGGACCACTGGGCCAAGCTCGGACGCAACTACTTCTGCAGGTTTGACTATGAGGGCGTGGACCCCAGAGCAGCCTTCTATCTGATGAGGGACTTGGAGGGGGTGATCACAGACAAAGCCTTCCCAAGCCAGAAGTTTGCGGTGGGGAACACCGTCTACAGCGTGGAGCGGGCTGATAACTTTGAGTACGTCGACCCTGTGGACGGAACTGTGGTCCGCAACCAGGGTCTGCGGATCATCTTCACTGATGCATCCCGTCTGGTCTTCCGTCTGAGTGGGAGTGGGGGAGGGGCCGGGGCCACGGTCCGGATCTATGCAGAGAGCTTAGAGAGAGACCCCGAGAGACAAAACAGAGAAACTCAGGCGGTGCTGGGTCCCCTCATTGCCATCGCCCTGAAGATCTCTGACATCCACGAGAGGACAGGACGCCGCAGCCCCACCGTCATCACCTGAGCTCTGCtccaccgcacacacacacacacacacctgagtgcTCCCCcccacaaaacacacacgcaTCTCTGAGGCCACCACGTCCTGCTTGTTGTCACACCTGGGGCCAATAGCAAGCAAGCGCTATTCACTCTCTATTTATATCAACATTTTAAATATTATTTGGTCTGCAAAGAAAAGAAGCAAGCTGTGTATTTCAGCAGTTGATAAGACACCAATTGTTAATATCATGCCTCTGTTTTGAATGTTTTGTGTTCTGGATGTGTGAAATTACAGCCACAAAGCCTGTGTCtttatctatgtgtgtgtgtgtgtatttgtttgccTTATCATTCATTATAAAGGCGACTGACGGAATTAAAGGCAGAAGTCCAGTTGTTTATACAA

Function

NR:

description
phosphoglucomutase-like protein 5

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0016868 intramolecular transferase activity, phosphotransferases molecular_function

KEGG:

id description
K15636 PGM5; phosphoglucomutase-like protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606441.2 True 2488 mRNA 0.54 11 39536644 39583427

Neighbor

gene id symbol gene type direction distance location
foxd5 LOC106584956 coding upstream 855 39533936 ~ 39535789 (+)
cbwd cbwd1 coding upstream 9998 39521723 ~ 39526646 (+)
LOC110525923 NA coding upstream 131383 39402537 ~ 39405261 (+)
fancc fancc coding upstream 224546 39269915 ~ 39312098 (+)
trnaa-ugc-17 NA coding upstream 247982 39288589 ~ 39288662 (+)
LOC110525927 smim15 coding downstream 90537 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 coding downstream 151276 39734703 ~ 39750180 (+)
LOC110525933 LOC106585165 coding downstream 299350 39882777 ~ 39901525 (+)
LOC110525934 LOC106580580 coding downstream 332711 39916138 ~ 39921723 (+)
LOC110525942 LOC106585173 coding downstream 563909 40147336 ~ 40154986 (+)
G505333 NA non-coding upstream 5453 39435988 ~ 39531191 (+)
G505377 LOC106605384 non-coding upstream 51975 39464768 ~ 39484669 (+)
G505363 NA non-coding upstream 103743 39432680 ~ 39432901 (+)
G505359 NA non-coding upstream 106612 39429805 ~ 39430032 (+)
G505356 NA non-coding upstream 109741 39426668 ~ 39426903 (+)
G505795 NA non-coding downstream 83827 39667254 ~ 39667805 (+)
G505803 NA non-coding downstream 87726 39671153 ~ 39671452 (+)
G505827 NA non-coding downstream 132964 39716391 ~ 39717493 (+)
G505857 NA non-coding downstream 181541 39764968 ~ 39765533 (+)
G505865 LOC106585162 non-coding downstream 189386 39772813 ~ 39776463 (+)
G499111 NA other upstream 5384907 34151140 ~ 34151737 (+)
LOC110525816 LOC106585060 other upstream 6071589 33447246 ~ 33465055 (+)
c6h22orf39 cssa24h22orf39 other upstream 6216296 33317578 ~ 33320353 (+)
LOC110525799 LOC106585046 other upstream 6372383 33135282 ~ 33165186 (+)
G505988 NA other downstream 379225 39962652 ~ 39963098 (+)
G506095 atp5a1 other downstream 613373 40196800 ~ 40203886 (+)
LOC110525949 LOC106585178 other downstream 673640 40256994 ~ 40259050 (+)

Expression


Co-expression Network