LOC110525027 (LOC106584957)


Basic Information

Item Value
gene id LOC110525027
gene name LOC106584957
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39808201 ~ 39819427 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604986.2
gagaaagagaggagagagcagcggAGGATTTCACACTCAAATGTATTTGACCTTCTTTGTGAAATCTGGAAATCTGTGGAGGGTATCTGGCAGCAATGAGCTGTTGAATGTTTGAGACTTGAGGGATGGACCTGGAGAAAGTGTTATAGCAGAACGGTCCTACATCAGTGGACCTTTCATTATTGGAGTAATCATCTGAGAAACTCTGGTTTGGAATTAAACTCAGCGGGACATAGGACGGCTCCTTGATTTGTCATTGGAATACACTGACAGTATATGCACTTGTAAAAAAATACGGTgggtgtttttgtttttatttatctaCCTGGACCTCTGTATGGGAAGAAACGTGAAAGAGAGGACTCTCAGATTGGTCATTGGAATTCATTGACTTTCAGTACAGTAACTGCTCTAGCTACCAAAAAAAACAGGAGGAACAGAAGGACATCTCTTTTTGCGTAGAGAACTGGTAGAAAAGGTATCAGATAGCCCCATTTCCCAGGAGGGCTCCCCTCCCTGCCCTCCTAGCCTCCCCTGTCCCCAGCAGCATGTCCCAGGCTGTGAGGCTGATTCCAGTCCTCCCCAAACCACTCTACCATGAGCACATGGGCTGCTGGAGGGAGTAAGGCTGCCTCTGCCTGGTCCACCTCTGGGTCTTGGTTTAGGTCTGGCTCTGGGTCCAGATTtaggtctggttctgggtctgggctAAGGTCTGGCTCCAGCTCCATCTCGGGGTTCTCCTTTTCCAGCCTGTCACTGTCTCTGCTGCTAGCACAGCTGCTCTCCCTTTCTGTCCCTTTGGTTGTCTGTCATCAACCTCTCTACAAAGGCAGGAACCAGCCCCACAGCCCCAACAGCACTCTTAGTGCCCCGGTGAACAGTTCCCTGGCTGGGTCCAGGATTGGAGGAACTGGGCAGACTGGGGATCCCTTAGGAAGGACAGGGGGTCCACTTGGGAGGCATGTACGCAGCTACAACCACCTGCAGGGAGATGTGCGGCGGAGAAAGCTCTTCTCCTTCCAGAAGTTCTTCCTGCGGATCGATGAGTATGGCAGAGTCAACGGGACCAAGAGCAAAGATGACCCACTCAGTATTCTGGAGATCACATCAGTGGATGTGGGCGTGGTGGCTATCAAAGGACTGGGCAGTAACTACTACCTGGCTATCAGCACCAAGGGAGAGCTGTATGGAGCGAAAGAGTTTGGCATTGACTGCACACTGAAGGAACGTATTGAAGAGAACGGCTATAACACCTACGCCTCAGCCGAGTGGAGGAACAAGAAGAGACAGATGTTTGTGGGCCTGAGTGTCCACGGGAGGCCACTGAGAGGGAAGAAAACACGGAGGAAGAATACGGCCACACACTTCCTCCCCATCATGgtgtgatgatgaggaggagctTTTTACTGGACTAGACCCTGTCGGAGAGCTAATTCAGCACTGAACAATCTTTCAACTAAGGATAAGAAAGGAATCTGGACAGAGAGCATCTGAactaaaatacatattttgtctAAGGAAGTTACTTAACTGCATGCTGCCTCCCACTGGGCAcggacgtcaattcaacgtctattccacgttggttcaatgtgatttcattgaaattacgtggagcaacgttgattcaaccagctgTGCCCAGTGGGGCTGCTTCTGACTTTGCTTGAGATGGTTTATTGGTTTGGGGGATGGACAGTGTTTTCTGTGGCACATGGTGAAATATAAACTCTATTCTGTGCCAAATCATTGGAAGGAGGTGGACTGAAGGAGGA

Function

NR:

description
fibroblast growth factor 10-like

GO: NA

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604986.2 True 1778 mRNA 0.49 3 39808201 39819427

Neighbor

gene id symbol gene type direction distance location
LOC110525931 LOC106585163 coding downstream 2860 39790133 ~ 39805341 (-)
LOC110525929 LOC106585162 coding downstream 29663 39751726 ~ 39778538 (-)
ndufaf2 ndufaf2 coding downstream 93085 39679494 ~ 39715116 (-)
LOC110525926 zswim6 coding downstream 138125 39619282 ~ 39670076 (-)
dock8 LOC106585156 coding downstream 291078 39440552 ~ 39517123 (-)
LOC110525932 LOC106585164 coding upstream 6833 39826260 ~ 39877951 (-)
LOC110525935 LOC106580582 coding upstream 82105 39901532 ~ 39905407 (-)
gk gk coding upstream 87143 39906570 ~ 39911822 (-)
npc1l1 npc1l1 coding upstream 115901 39935328 ~ 39946578 (-)
LOC110525938 aebp1 coding upstream 139434 39958861 ~ 39983075 (-)
G506639 NA non-coding downstream 190910 39616938 ~ 39617291 (-)
G505752 NA non-coding downstream 200404 39607572 ~ 39607797 (-)
G505748 NA non-coding downstream 203810 39604097 ~ 39604391 (-)
G505743 NA non-coding downstream 208014 39599927 ~ 39600187 (-)
G505739 NA non-coding downstream 212188 39595797 ~ 39596013 (-)
G506795 NA non-coding upstream 86122 39905549 ~ 39905853 (-)
G506802 NA non-coding upstream 113093 39932520 ~ 39932855 (-)
G506805 NA non-coding upstream 128074 39947501 ~ 39947725 (-)
G506806 NA non-coding upstream 132272 39951699 ~ 39951922 (-)
G506865 NA non-coding upstream 229202 40048629 ~ 40048833 (-)
G506641 NA other downstream 183857 39623685 ~ 39624344 (-)
aopep cssa24h9orf3 other downstream 384711 39313471 ~ 39434971 (-)
G505493 ptch1 other downstream 574991 39232693 ~ 39233210 (-)
G505472 NA other downstream 601932 39205878 ~ 39206269 (-)
G506785 NA other upstream 67595 39887022 ~ 39889931 (-)
G507063 NA other upstream 721232 40540659 ~ 40542329 (-)
G507906 selenop other upstream 1601597 41421024 ~ 41461922 (-)
znf131 znf131 other upstream 1615548 41431651 ~ 41459095 (-)

Expression


Co-expression Network