LOC110525935 (LOC106580582)


Basic Information

Item Value
gene id LOC110525935
gene name LOC106580582
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 39901532 ~ 39905407 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606461.2
gagagagagagagagagagagagagagagagagcgagagagagcgagagagagcgagagagcatgtATGGCCATGTATGGGACTGTGGTACACACTGCAGGCCTATTATAAGAGGGCAGAAGATAACATGAGCCATACATAAACTCTACCCAGCATCACACCTAGTCCTGGGCACAGAGAGCCACTATAACACACAGACATGGCCAGTAAGAAGGCTGCTaataagagacagagaggagcccAGAAGAGCTGCTCCAATGTCTTCTCCATGTTCGAACAGTGTCAGATACAGGAGTTCAAGGAGGCTTTCGGATGTATTGACCAAGACAGAGATGGTGTGATCAAAAAACAGGACCTGAGAGAAACCTATGGACAGCTAGGGAAGCTGAACGTTAAGGATGAGGAACTGGATGAGATGTTGAACGAGGGGAAGGGTCCCATCAACTTTACTGTGTTCCTCACTCTATTTGGAGAGAAACTCAACGGCACAGACCCCGAGGACACCATCCTCGCTGCCTTCAAGCTCTTCGACCCAAACGGCACAGGTTTCGTCAACAAGGATGAGTTTAAACGGTTACTGATGAACCAGGCGGATAAATTCACAGCAGAGGAGGTGGACCAGGCGTTCTCTGTGGCGCCAATTGACGTGGCCGGCAACATCGATTACAAGTCACTGTGTTACATCATCACCCACGGAGACGAGAAGGAGGAGTCCTAAAGGCCCTCAGCAAAAAACCCTGACCCCCGACCCATAACCCCTGATAGGGCAGAACTGGAATCTCCTCTGTGGTTGTCTTTTGCCAATCCAGTAAAGAAATCAAATCAA

Function

NR:

description
PREDICTED: myosin regulatory light chain 2, atrial isoform-like

GO: NA

KEGG:

id description
K12754 MYL7; myosin regulatory light chain 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606461.2 True 826 mRNA 0.50 7 39901532 39905407

Neighbor

gene id symbol gene type direction distance location
LOC110525932 LOC106585164 coding downstream 23581 39826260 ~ 39877951 (-)
LOC110525027 LOC106584957 coding downstream 82105 39808201 ~ 39819427 (-)
LOC110525931 LOC106585163 coding downstream 96191 39790133 ~ 39805341 (-)
LOC110525929 LOC106585162 coding downstream 122994 39751726 ~ 39778538 (-)
ndufaf2 ndufaf2 coding downstream 186416 39679494 ~ 39715116 (-)
gk gk coding upstream 1163 39906570 ~ 39911822 (-)
npc1l1 npc1l1 coding upstream 29921 39935328 ~ 39946578 (-)
LOC110525938 aebp1 coding upstream 53454 39958861 ~ 39983075 (-)
LOC110525939 LOC106585169 coding upstream 116312 40021719 ~ 40033727 (-)
star star coding upstream 130799 40036206 ~ 40040599 (-)
G506639 NA non-coding downstream 284241 39616938 ~ 39617291 (-)
G505752 NA non-coding downstream 293735 39607572 ~ 39607797 (-)
G505748 NA non-coding downstream 297141 39604097 ~ 39604391 (-)
G505743 NA non-coding downstream 301345 39599927 ~ 39600187 (-)
G505739 NA non-coding downstream 305519 39595797 ~ 39596013 (-)
G506795 NA non-coding upstream 142 39905549 ~ 39905853 (-)
G506802 NA non-coding upstream 27113 39932520 ~ 39932855 (-)
G506805 NA non-coding upstream 42094 39947501 ~ 39947725 (-)
G506806 NA non-coding upstream 46292 39951699 ~ 39951922 (-)
G506865 NA non-coding upstream 143222 40048629 ~ 40048833 (-)
G506785 NA other downstream 11601 39887022 ~ 39889931 (-)
G506641 NA other downstream 277188 39623685 ~ 39624344 (-)
aopep cssa24h9orf3 other downstream 478042 39313471 ~ 39434971 (-)
G507063 NA other upstream 635252 40540659 ~ 40542329 (-)
G507906 selenop other upstream 1515617 41421024 ~ 41461922 (-)
znf131 znf131 other upstream 1529568 41431651 ~ 41459095 (-)
G508303 NA other upstream 1915448 41820855 ~ 41821210 (-)
G508891 NA other upstream 2238690 42144097 ~ 42144885 (-)

Expression


Co-expression Network