LOC110525942 (LOC106585173)


Basic Information

Item Value
gene id LOC110525942
gene name LOC106585173
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 40147336 ~ 40154986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980100.1
GGCAAAGCATAAAATACTTGTCATTCAAACGTTTCCATACTTTGCTGTCCATGATCAATGCATtaactggagcgtttcaataaaGCAATTTTGTCCCCAATATCAGTCTATCCTATTTGACAGTTAATTGTATCACGATTATTTGTATGGCAAACGACAGGAGTGCTGGGGACGCTGCTTGGGTTATGCATCATCAAATGCCGTCGAATCCCAAAGCCGCCTGGCCTTCAAATTACAACTCAGAAAATAATAACGTGAACTGGAGTAACGCTATGGCAATGCAAGCATATCCAAATGGCCACAGTGTCTATAACCCTGGTCCAGGCCAGTATCCGGCAAGTTCTTTCCACCCATCCAACCCATTCTACTGTGCAGACCAGATGCCTCCCAGGCAGGCCCCAGGCCAGTACCCTAGCCAGTGCTGCCCAGGACCAGAGCAGAGCACAGGGGGGTCAGGACAACCACACGCCCAGCACCAACATCAGCATCACCACTATCCTGGACCACACTGTCAAGGGGCCTCTGGCTATCTTCCTGGGTCTTACTCGCACTATGGGGAAGGTGGTCCTGCGTTGCCACCAAACCCCCCATACTCCACTGGACAGGCCATTCACCATAGGCCGCAGGCTGAGGCTTGGGCCCACTCGGGTGGGTATGGGCCCTCACACCAGCAGTGGCAGCCAGACAGCCACTATGGGACCCCTGCCCACCCCCAACAACCTCCAGCATGGCCAGGGACAGGCACTGGAGCCCCACCCTCCTATGAAGCCAAGGACCAGCACTACGCAGGACCCCACCAGCACCAGCGTGCCCCACAGGTGGGACCCAAACCCAGACTGGCCCACTCCCCTAACCCCACCAATGGCAAGCCTGTCGACTTCAGCTCACCTCCCCAGATGTACAATAAACCAGGGCGAGGAGGGGCGCAGGAGCCAAAGCCTTCCCAGGGTGAGCTTCCACCCCCAATCCCAGCTCCAGCCCAGCATCAGGGAGTGATCCACAACCCTAGCCTGGCCAAAGTCCAGCAGGTCATGGCCCGGGTGCTTTTGCTCCATGAGGATGTGGACGAGTTTGTGGGTAAAAAATCGGACAAGAGTTACAGGTACCTAGAGGAACTGCTTACTAAGGAGCTGCTGGTGTTGGACTCAGTGGAGACTCAGGGACAGGAAGTGGTAAGGCAGGCCCGGAAGGAGGCTGTGCAGAGGATCCAGGCCATACTGGACCGGCTGGAGAAAAAGGCCTTCTGAACTGAACCAGTTATGTATATGGACGGGTCTTACTGTTCTTTTCTTGTGACATTTGAATTTTCCACAGTCAGGTTGTGGGCCTTATTTCAGATTTAAACCGGTCCCTTAGAATTCATTGGAGTCCTAAGTCCTTGTTTGTTGTCTACACCTCCCGGATCGGAAAGGTTTAGATTGGCTGATTGTCAACAAGGGTTTGGTTTGGAATCGGGCCAGCTTGGGATACTTTATGCAGGTGTGATCACAACATAAGATGCCATTTCAAAGTAGTCATGATGGAAAATTGAATGGTTGTACATATCAAGTTATGATGTTGGGTTAGTTTTCATAACCCGACATTAGTGTCCATGACTGCTTAAAGCGTCTTATGTCATACTTATGCCCGTGCAATGTAGTGTCGCCATGTTCCTTTCGAAGTAGGTAGACATTTCCCCTTAATCACTGGTACAGGGTCAGATAAGTTTTCGGTTTGGATTTGGAGTAGGCTGatctgatcctaggtctgtggttaAAGGCCATGTATTCCTTTCACCATGTTTTCTTAAATGATGTGAACTAATGGCACTGCCATGAGATTTCCCCTTTATCACTCACCCCAACATTGTCACCCACTTGTCATTGCAAGCAGAATGCAAACggtgcattcacacacacagccttccaAATCGGTACTGGGTAATGTATTCTGTTTATTTGACACTTCAGGATATACAAAGGTAGGGTCAATTGCTTTTCAATGCGGTCGATTTTAAAGAAATGTATTGAAATCCACTTAATTGAGAAGTGGCGCAATGAAAATATTGAGCAAGTTTCAATTCACATTCTGAATAGatggaattgatcccaaccctggtatGTACTGTTTTGTAGTTGGTCTACAACTTCTTCACAATGCTATTTCCATTGACTGGTGGTAGACAGTCTaagtgcagatctaggatcagtttgtagAAGGATGAAAATGAAAACTGACCTTCCTTTGGTGTGATCTCTGACCATTCTACCACATAGTTTGACCAATCCAGTCTCGGACCAGTGACTATTTGAGGGAGGAAACGAAGGATGCATTGTCAAAGTATTGGATGAGGAGGTTGGATCAACGATTTCCTAGACTGTGATCGGTTCTTATAAATCACAAGTGCCATAATATCGGCAGGTGCTTTTTcaaatctttaaaaaataaaaataaacaatctCTAAAGCTTTGCATGGAACCAAATGTTATGTTTGTCATATTAGTTTCTCTTTTCCCCCCATGTGCTggtattttttttgtgttaagATTATTGCGTATTAGTTTGATTGATGTGTGTGTAAAAGGTCATGTCTACAGAGGTTTCTGATTAAGTGCATGTTTCCAACGTTTAGATGGAAATATTTGCCTGACTGATTTTAGAAGTGACTATAGCTCAAACTGAGGACTTGCATTAAATggcatattttttaaa
>XM_021606470.2
CAAAGCATAAAATACTTGTCATTCAAACGTTTCCATACTTTGCTGTCCATGATCAATGCATtaactggagcgtttcaataaaGCAATTTTGTCCCCAATATCAGTCTATCCTATTTGACAGTTAATTGTATCACGATTATTTGTATGGCAAACGACAGGAGTGCTGGGGACGCTGCTTGGGTTATGCATCATCAAATGCCGTCGAATCCCAAAGCCGCCTGGCCTTCAAATTACAACTCAGAAAATAATAACGTGAACTGGAGTAACGCTATGGATGCTTCCCAATACCCTGGTTACTCCTCAAACTACTGGTACCCCCAGTCACATTCCACAGCAGGGCACTATGCAAATGCATATCCTTCAGGATCTGACGTGCAGCCACCTTACAACCCACAGGCAATGCAAGCATATCCAAATGGCCACAGTGTCTATAACCCTGGTCCAGGCCAGTATCCGGCAAGTTCTTTCCACCCATCCAACCCATTCTACTGTGCAGACCAGATGCCTCCCAGGCAGGCCCCAGGCCAGTACCCTAGCCAGTGCTGCCCAGGACCAGAGCAGAGCACAGGGGGGTCAGGACAACCACACGCCCAGCACCAACATCAGCATCACCACTATCCTGGACCACACTGTCAAGGGGCCTCTGGCTATCTTCCTGGGTCTTACTCGCACTATGGGGAAGGTGGTCCTGCGTTGCCACCAAACCCCCCATACTCCACTGGACAGGCCATTCACCATAGGCCGCAGGCTGAGGCTTGGGCCCACTCGGGTGGGTATGGGCCCTCACACCAGCAGTGGCAGCCAGACAGCCACTATGGGACCCCTGCCCACCCCCAACAACCTCCAGCATGGCCAGGGACAGGCACTGGAGCCCCACCCTCCTATGAAGCCAAGGACCAGCACTACGCAGGACCCCACCAGCACCAGCGTGCCCCACAGGTGGGACCCAAACCCAGACTGGCCCACTCCCCTAACCCCACCAATGGCAAGCCTGTCGACTTCAGCTCACCTCCCCAGATGTACAATAAACCAGGGCGAGGAGGGGCGCAGGAGCCAAAGCCTTCCCAGGGTGAGCTTCCACCCCCAATCCCAGCTCCAGCCCAGCATCAGGGAGTGATCCACAACCCTAGCCTGGCCAAAGTCCAGCAGGTCATGGCCCGGGTGCTTTTGCTCCATGAGGATGTGGACGAGTTTGTGGGTAAAAAATCGGACAAGAGTTACAGGTACCTAGAGGAACTGCTTACTAAGGAGCTGCTGGTGTTGGACTCAGTGGAGACTCAGGGACAGGAAGTGGTAAGGCAGGCCCGGAAGGAGGCTGTGCAGAGGATCCAGGCCATACTGGACCGGCTGGAGAAAAAGGCCTTCTGAACTGAACCAGTTATGTATATGGACGGGTCTTACTGTTCTTTTCTTGTGACATTTGAATTTTCCACAGTCAGGTTGTGGGCCTTATTTCAGATTTAAACCGGTCCCTTAGAATTCATTGGAGTCCTAAGTCCTTGTTTGTTGTCTACACCTCCCGGATCGGAAAGGTTTAGATTGGCTGATTGTCAACAAGGGTTTGGTTTGGAATCGGGCCAGCTTGGGATACTTTATGCAGGTGTGATCACAACATAAGATGCCATTTCAAAGTAGTCATGATGGAAAATTGAATGGTTGTACATATCAAGTTATGATGTTGGGTTAGTTTTCATAACCCGACATTAGTGTCCATGACTGCTTAAAGCGTCTTATGTCATACTTATGCCCGTGCAATGTAGTGTCGCCATGTTCCTTTCGAAGTAGGTAGACATTTCCCCTTAATCACTGGTACAGGGTCAGATAAGTTTTCGGTTTGGATTTGGAGTAGGCTGatctgatcctaggtctgtggttaAAGGCCATGTATTCCTTTCACCATGTTTTCTTAAATGATGTGAACTAATGGCACTGCCATGAGATTTCCCCTTTATCACTCACCCCAACATTGTCACCCACTTGTCATTGCAAGCAGAATGCAAACggtgcattcacacacacagccttccaAATCGGTACTGGGTAATGTATTCTGTTTATTTGACACTTCAGGATATACAAAGGTAGGGTCAATTGCTTTTCAATGCGGTCGATTTTAAAGAAATGTATTGAAATCCACTTAATTGAGAAGTGGCGCAATGAAAATATTGAGCAAGTTTCAATTCACATTCTGAATAGatggaattgatcccaaccctggtatGTACTGTTTTGTAGTTGGTCTACAACTTCTTCACAATGCTATTTCCATTGACTGGTGGTAGACAGTCTaagtgcagatctaggatcagtttgtagAAGGATGAAAATGAAAACTGACCTTCCTTTGGTGTGATCTCTGACCATTCTACCACATAGTTTGACCAATCCAGTCTCGGACCAGTGACTATTTGAGGGAGGAAACGAAGGATGCATTGTCAAAGTATTGGATGAGGAGGTTGGATCAACGATTTCCTAGACTGTGATCGGTTCTTATAAATCACAAGTGCCATAATATCGGCAGGTGCTTTTTcaaatctttaaaaaataaaaataaacaatctCTAAAGCTTTGCATGGAACCAAATGTTATGTTTGTCATATTAGTTTCTCTTTTCCCCCCATGTGCTggtattttttttgtgttaagATTATTGCGTATTAGTTTGATTGATGTGTGTGTAAAAGGTCATGTCTACAGAGGTTTCTGATTAAGTGCATGTTTCCAACGTTTAGATGGAAATATTTGCCTGACTGATTTTAGAAGTGACTATAGCTCAAACTGAGGACTTGCATTAAATggcatattttttaaa

Function

NR:

description
BAG family molecular chaperone regulator 4-like

GO: NA

KEGG:

id description
K09558 BAG4; BCL2-associated athanogene 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980100.1 False 2692 mRNA 0.47 4 40147336 40154986
XM_021606470.2 True 2813 mRNA 0.47 5 40147338 40154986

Neighbor

gene id symbol gene type direction distance location
LOC110525934 LOC106580580 coding upstream 225613 39916138 ~ 39921723 (+)
LOC110525933 LOC106585165 coding upstream 245811 39882777 ~ 39901525 (+)
LOC110525928 LOC106585161 coding upstream 397156 39734703 ~ 39750180 (+)
LOC110525927 smim15 coding upstream 469071 39673964 ~ 39680031 (+)
pgm5 LOC106585157 coding upstream 563909 39536644 ~ 39583427 (+)
LOC118965025 NA coding downstream 5178 40160164 ~ 40165614 (+)
LOC110525943 NA coding downstream 17334 40172320 ~ 40178096 (+)
LOC110525945 LOC106585174 coding downstream 30185 40185171 ~ 40191808 (+)
LOC110525947 LOC106585175 coding downstream 49917 40204903 ~ 40215454 (+)
LOC110525949 LOC106585178 coding downstream 102008 40256994 ~ 40259050 (+)
G506039 LOC108412098 non-coding upstream 84722 40061587 ~ 40062614 (+)
G506038 NA non-coding upstream 90395 40056039 ~ 40056941 (+)
G506035 NA non-coding upstream 94643 40052458 ~ 40052693 (+)
G506033 LOC106584485 non-coding upstream 96851 40050225 ~ 40050485 (+)
G506019 LOC106585169 non-coding upstream 120941 40021735 ~ 40026395 (+)
G506112 NA non-coding downstream 11358 40166344 ~ 40166961 (+)
G506127 NA non-coding downstream 25385 40180371 ~ 40180617 (+)
G506129 NA non-coding downstream 27184 40182170 ~ 40182387 (+)
G506100 NA non-coding downstream 38846 40193832 ~ 40194236 (+)
G506096 NA non-coding downstream 39602 40194588 ~ 40196747 (+)
G505988 NA other upstream 184238 39962652 ~ 39963098 (+)
fancc fancc other upstream 835462 39269915 ~ 39312098 (+)
G499111 NA other upstream 5995599 34151140 ~ 34151737 (+)
G506095 atp5a1 other downstream 41814 40196800 ~ 40203886 (+)
G506281 LOC106585187 other downstream 389877 40544863 ~ 40547513 (+)
G506285 NA other downstream 411081 40566067 ~ 40566429 (+)
fbxl17 fbxl17 other downstream 413740 40568637 ~ 40886427 (+)

Expression


Co-expression Network