LOC118965077


Basic Information

Item Value
gene id LOC118965077
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 40334257 ~ 40335548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052413.1
cAGATCTAACCGTTGACCTCTCCTGTTTCAGTCTGTGGTGACGAGGGAGGGTAACAAGCTGACGGCCATCCTGAATGGGATCGAATATGTCACAGAACTTACAGACGCAAACACCCTCGTCAACACCATGACTCTGTCTGGCATGTCATACAAGAGGACCAGCAAACGAATGTGAAGATCTACTGCACTCTTTGGATTAATAAAATGTGAAAGGCATTGAA
>TU574725
tttttttcttctccatatATGGCCATCCAACTTGGGCCTGTTAAATTGGTCCTAGTTGACTgtagttggtgaccactgctttcAGATCTAACCGTTGACCTCTCCTGTTTCAGTCTGTGGTGACGAGGGAGGGTAACAAGCTGACGGCCATCCTGAATGGGATCGAATATGTCACAGAACTTACAGACGCAAACACCCTCGTCAACACCATGACTCTGTCTGGCATGTCATACAAGAGGACCAGCAAACGAATGTGAAGATCTACTGCACTCTTTGGATTAATAAAATGTGAAAGGCATTGAATGGTCTGGTCTCAGCATTTCATATCAATGGGTTTAACTTCAGGGGAAAATTGAAGTTTGTAATGAGGCAAGGTTTGAGTTGGATGAATGTGGGATTCAATAGAATAGCGTAGTTCCGTAAACATTACACTCGGGCCAAAATGGATTTTCTACATTTTAATGTGACTGCTTTATAGCAAATGTCAACCCAGCAGTGTAGAAATGAAGGCTTTGCTAGTTCCATCTAGTCTGTTGCAATATGGGTCAGAATCCTACCACATTGGGTGCATCAGTTTAAAAGCAGATTCCTCAATT

Function

NR:

description
fatty acid binding protein 1-B.1-like, partial

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052413.1 False 221 mRNA 0.46 2 40334339 40335255
TU574725 True 596 lncRNA 0.42 2 40334257 40335548

Neighbor

gene id symbol gene type direction distance location
LOC110525028 fabpl coding upstream 16906 40314863 ~ 40317433 (+)
LOC110525953 LOC106584961 coding upstream 24484 40286466 ~ 40309855 (+)
LOC110525949 LOC106585178 coding upstream 75289 40256994 ~ 40259050 (+)
LOC110525947 LOC106585175 coding upstream 118885 40204903 ~ 40215454 (+)
LOC110525945 LOC106585174 coding upstream 142531 40185171 ~ 40191808 (+)
LOC118964866 fabpl coding downstream 16157 40351412 ~ 40354009 (+)
LOC110525029 fabpl coding downstream 34910 40370165 ~ 40372761 (+)
LOC110526900 fabpl coding downstream 79612 40414867 ~ 40417444 (+)
LOC110525956 fabpl coding downstream 103404 40438659 ~ 40440911 (+)
LOC110515135 fabpl coding downstream 114312 40449567 ~ 40452162 (+)
G506195 NA non-coding upstream 23131 40310768 ~ 40311208 (+)
G506194 NA non-coding upstream 26629 40307480 ~ 40307710 (+)
G506192 NA non-coding upstream 29284 40304846 ~ 40305055 (+)
G506187 NA non-coding upstream 37114 40297020 ~ 40297225 (+)
G506186 NA non-coding upstream 38121 40295927 ~ 40296218 (+)
G506216 NA non-coding downstream 60090 40395345 ~ 40406885 (+)
G506198 fabpl non-coding downstream 73998 40409253 ~ 40410979 (+)
G506250 NA non-coding downstream 136746 40472001 ~ 40472427 (+)
G506251 NA non-coding downstream 137851 40473106 ~ 40474139 (+)
G506254 NA non-coding downstream 141760 40477015 ~ 40477223 (+)
G506095 atp5a1 other upstream 130453 40196800 ~ 40203886 (+)
G505988 NA other upstream 371241 39962652 ~ 39963098 (+)
LOC110525928 LOC106585161 other upstream 585859 39734703 ~ 39750180 (+)
LOC110525927 smim15 other upstream 654308 39673964 ~ 39680031 (+)
G506281 LOC106585187 other downstream 209608 40544863 ~ 40547513 (+)
G506285 NA other downstream 230812 40566067 ~ 40566429 (+)
fbxl17 fbxl17 other downstream 233471 40568637 ~ 40886427 (+)
G507768 LOC105030512 other downstream 1134296 41469551 ~ 41471408 (+)
G508559 dph7 other downstream 1793970 42129225 ~ 42131940 (+)

Expression


Co-expression Network