LOC110526900 (fabpl)


Basic Information

Item Value
gene id LOC110526900
gene name fabpl
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 40414867 ~ 40417444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608082.2
AGTTAATGAGTGCAGGGCTGGATAGATGGGCGTATAAAGACGAGCAGGGAGCTGTGGCTGACTCTACTGTCACTGTCATATAGTCACCATGTCTTTCTCAGGGAAATACCAGATGGAGTCACATGACAACTTTGAGTCTTTCATGGAGGCTGTTGGTCTCCCTGATGAGCTTATCCAGGAGGGCAAAGACATCAAGAGCATCTCTGAGATTGAAGAGACTGGAGACCACTTCAAGGTGACTGTCAccacggggacaaagatcctcACCAACTCCTTCACCATTGGCCAGGAGACGGAGCTCGAGTCGCCGACCGGGGAGAAGGTCAATTCTGTGGTGACGAGGGAGGGTAACAAGCTGACGGCCATCCTGAATGGGATCGAATATGTCACAGAACTTACAGACGCAAACACCCTCGTCAACACCATGACTCTGTCTGGCATGTCATACAAGAGGACCAGCAAACGAATGTGAAGATCTACTGCACTCTTTGGATTAATAAAATGTGAAAGGCATTGAA

Function

NR:

description
fatty acid binding protein 1-B.1-like

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608082.2 True 518 mRNA 0.49 4 40414867 40417444

Neighbor

gene id symbol gene type direction distance location
LOC110525029 fabpl coding upstream 42106 40370165 ~ 40372761 (+)
LOC118964866 fabpl coding upstream 60858 40351412 ~ 40354009 (+)
LOC118965077 NA coding upstream 79612 40334257 ~ 40335548 (+)
LOC110525028 fabpl coding upstream 97434 40314863 ~ 40317433 (+)
LOC110525953 LOC106584961 coding upstream 105012 40286466 ~ 40309855 (+)
LOC110525956 fabpl coding downstream 21215 40438659 ~ 40440911 (+)
LOC110515135 fabpl coding downstream 32123 40449567 ~ 40452162 (+)
LOC110525958 LOC106585182 coding downstream 52027 40469471 ~ 40475908 (+)
LOC110525957 LOC106585182 coding downstream 58593 40476037 ~ 40489852 (+)
LOC110525959 LOC106585184 coding downstream 83213 40500657 ~ 40506112 (+)
G506198 fabpl non-coding upstream 3888 40409253 ~ 40410979 (+)
G506216 NA non-coding upstream 7982 40395345 ~ 40406885 (+)
G506195 NA non-coding upstream 103659 40310768 ~ 40311208 (+)
G506194 NA non-coding upstream 107157 40307480 ~ 40307710 (+)
G506250 NA non-coding downstream 54557 40472001 ~ 40472427 (+)
G506251 NA non-coding downstream 55662 40473106 ~ 40474139 (+)
G506254 NA non-coding downstream 59571 40477015 ~ 40477223 (+)
G506249 NA non-coding downstream 73134 40490578 ~ 40490918 (+)
G506248 NA non-coding downstream 73902 40491346 ~ 40491768 (+)
LOC110525949 LOC106585178 other upstream 155817 40256994 ~ 40259050 (+)
G506095 atp5a1 other upstream 210981 40196800 ~ 40203886 (+)
G505988 NA other upstream 451769 39962652 ~ 39963098 (+)
LOC110525928 LOC106585161 other upstream 666387 39734703 ~ 39750180 (+)
LOC110525927 smim15 other upstream 734836 39673964 ~ 39680031 (+)
G506281 LOC106585187 other downstream 127419 40544863 ~ 40547513 (+)
G506285 NA other downstream 148623 40566067 ~ 40566429 (+)
fbxl17 fbxl17 other downstream 151282 40568637 ~ 40886427 (+)
G507768 LOC105030512 other downstream 1052107 41469551 ~ 41471408 (+)
G508559 dph7 other downstream 1711781 42129225 ~ 42131940 (+)

Expression


Co-expression Network