Gene
RNA
| Item | Value |
|---|---|
| gene id | avp |
| gene name | neu4 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40517591 ~ 40519539 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| neu4 | Enables exo-alpha-sialidase activity. Acts upstream of or within ganglioside metabolic process. Located in endoplasmic reticulum. Is expressed in several structures, including heart; integument; lens; pleuroperitoneal region; and solid lens vesicle. Orthologous to human NEU4 (neuraminidase 4). |
| description |
|---|
| vasotocin-neurophysin VT 2 |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0005185 | neurohypophyseal hormone activity | molecular_function |
| id | description |
|---|---|
| K05242 | AVP; arginine vasopressin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021606493.1 | True | 1203 | mRNA | 0.44 | 3 | 40517591 | 40519539 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525959 | LOC106585184 | coding | upstream | 11479 | 40500657 ~ 40506112 (+) |
| LOC110525957 | LOC106585182 | coding | upstream | 27739 | 40476037 ~ 40489852 (+) |
| LOC110525958 | LOC106585182 | coding | upstream | 41683 | 40469471 ~ 40475908 (+) |
| LOC110515135 | fabpl | coding | upstream | 65429 | 40449567 ~ 40452162 (+) |
| LOC110525956 | fabpl | coding | upstream | 76680 | 40438659 ~ 40440911 (+) |
| ccl27a | ccl28 | coding | downstream | 1435 | 40520974 ~ 40524282 (+) |
| slc35d2 | LOC106585185 | coding | downstream | 8299 | 40527838 ~ 40533844 (+) |
| fbxl17 | fbxl17 | coding | downstream | 49098 | 40568637 ~ 40886427 (+) |
| efna5b | LOC106585191 | coding | downstream | 455840 | 40975379 ~ 41084448 (+) |
| LOC110525969 | NA | coding | downstream | 663309 | 41182848 ~ 41188172 (+) |
| G506247 | NA | non-coding | upstream | 24359 | 40492027 ~ 40493232 (+) |
| G506248 | NA | non-coding | upstream | 25823 | 40491346 ~ 40491768 (+) |
| G506249 | NA | non-coding | upstream | 26673 | 40490578 ~ 40490918 (+) |
| G506254 | NA | non-coding | upstream | 40368 | 40477015 ~ 40477223 (+) |
| G506280 | NA | non-coding | downstream | 20962 | 40540501 ~ 40540903 (+) |
| G506281 | LOC106585187 | non-coding | downstream | 26774 | 40544863 ~ 40547513 (+) |
| G506336 | NA | non-coding | downstream | 118294 | 40637833 ~ 40639089 (+) |
| G506382 | NA | non-coding | downstream | 180521 | 40700060 ~ 40700389 (+) |
| LOC110525949 | LOC106585178 | other | upstream | 258541 | 40256994 ~ 40259050 (+) |
| G506095 | atp5a1 | other | upstream | 313705 | 40196800 ~ 40203886 (+) |
| G505988 | NA | other | upstream | 554493 | 39962652 ~ 39963098 (+) |
| LOC110525928 | LOC106585161 | other | upstream | 769111 | 39734703 ~ 39750180 (+) |
| LOC110525927 | smim15 | other | upstream | 837560 | 39673964 ~ 39680031 (+) |
| G506285 | NA | other | downstream | 46528 | 40566067 ~ 40566429 (+) |
| G507768 | LOC105030512 | other | downstream | 950012 | 41469551 ~ 41471408 (+) |
| G508559 | dph7 | other | downstream | 1609686 | 42129225 ~ 42131940 (+) |
