LOC110525969


Basic Information

Item Value
gene id LOC110525969
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41182848 ~ 41188172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473854.2
GCAATGTTTCAATTTGTCACTTTTTGCTTAAAGGTCCAACCTGTCCAACCTTCCAGAAGTTTGAGTGGGCGAAGACTGTGGCGCCGGAGTTAAAGCACATCAAAGTTGTTTTACCATGGCACATGATCGGGATGGACCTCATCGGCTCCTTCACGAAATCCAGGAAAGGCAACAGCTGGTGTCTGAAGGGGACCGATCACTTTACCAAGTGGGTGGAGGCAATACCCATTAAGTTCAGTAAAGGAAGAGAACGTGCTTAACTCTAAATACCCATCTGCAACCCATTAAAAAGGGTGCTTGGAACCAAAATtagatttttgtttttttatgatacaaaACTAGTGAGACCATCTCCAAGGATATAGTGGGCATCTTCAACACCCACTTTTCTCCTGAGGTCATCTTGAGTGACCGAGGTCAGGTACAGATGTTATAGGTTATATTCTGTCACCAatggtttgttttgtttattttgttacaatctgtttttgtttttccatGGTAGATAATCAGACATATTTCAATATCTTACATTGTCAATAGATATCACTTTCCTACCCCCCTCCTCCAGGTTTGGTGAATGGACCAACCAGGCACTTGTGATTGACTTAGTGTTGTTTGCCTATTGCTATTTTTGCTTAACGATCTTTCAGATCACTGAAACGCCACCTGATGTGGTGGAAGTTGTCGAAACCAGATCAGGACGCCTTCGAGAATTACCTTCAGGCACGGACTGAGAAGGATGTGGAGGTCTTTGACCATGTAAAAATTATTGTCCGTTGTTTGTTTTCTGGACCTCCAAGAGCTATAtaagaaatgtatttgtaatgTGAAACATAATTGCATGTGTTCCTGTCATCCAACAAGGTGAGACTGAACATGGACAAGGCgcaggagaaacagaaggagcGCTACCGGAGCAGAGTCAAGAAGGGGACCAAGTGCTACGACATCCAGGGCAAATTACTTGGTTTGGAAGAAGAACGAAAGGAAGGCAGAGACCTTGGAAATCTCGCTGCTCCTAGCTGTGGTCACGATCTGTTAAAGGTTACCTCGGAAGCCAACTATCTTCTGCGGTTGGACGGTCTACCACTGGAAGCATTGACGCCCTACACTTCAGTGAAGCCCAATTTACAAAGACCATCGACTGTCCGAGCCCCCCAGGAGGTATCCCGTCTACCAGAACCAGTGAGTTCGGATTAGTCTGATTCTCTGTGCTCTGAATCGGAGGAGGACTAGCTTGAGGTAGGCTACATGTTTGAAAAGTACATATCTCTGTGTTAATCCGTCAAATTTTCTCACAGTAAAGTGTaacctgtgtgtttgcttgtttacgTCGGTCTCCTACCATGTCCCCTTCaactctgctcctgttctccaAGAGCTAGGGGTTTTGGCCAACACCCAgatccacctgatgtcctccattGCCAACCATTCTTTTCATTACCTCATCTACAGCTACTGTTGTCATTACGCCATCTACAGCTACGGTTATCATTATCTGCTAAGAAAGCTGTCTTGCGCTATCCTACTGGGCACATAATATGTGAGAGACACAGATTGACTAAAAACATTAGCACTGCAAAACCTCTGAACAAAGCGAACAGCAGTGCCTGGACTTTGCAGTCTCCTTCTTCAAGTCCCCCCTTCGGAGACTGGGtgcctgttgagaacaagtgacaGGCAGAATCTCCCACCCACACAGCAACCACCTCCTATATTCCACACACCAGAATGTATTTAGCCATTGCCATGTGAAAATAAATGCATGACACAACTGTACCAAAAAATATCAACGTTTCTGTGTTACAATCTTAAGTATTGACGGGTTGCTTTTCACAACATGTTCATTGCTGTAAGGTATCCTCTGATGGTATTTATTTGTTCCTCATTATTCATTGAATGTAGTAAATCCTGCCGTAGGGATAGCGTGCAACTCACAGGTGAGGGCAACGACCTCTTCCTTGAGTCTGAGAGCTGATCCCTCTTTTGTTCTAGCAAGACCTGTGCTCTTGGGGTAATTCTCAAAAtgcattttaaatgtttttttaaaggaagTGTCAGGGAACATTATTTTTTACACGTATCTAACCTTTGTGTAGTgacagtctccatatatactgtacttcCATAAATGTTTTATACTGGTATCAGGGGACTTTATGTATTAACCTATCAAATATTGTAGTTGggcaacatatgagatgtgaataTAAAACATTTCATTCTGAAGTCGGAGTGTACTTTCTCTTGATTCAGCTCAAATAACGGCCGCCATTGATTTAAAGAAATGTTATGACATTTTTTTACGTGGTTGCGTCATATTTCTTTGTATACTTTCCATTGAAGCTTGCATCAatgcatgcttcaaaatatgtacAAACGGAGTTTGCATTTTGAGAAGTGCCCTCCATGCTCCATTTTGCATGCTTTCATTTGGAATCGTACTCCGATCCTCCCGTGCTCCAATTTTAGTTGTATGCATTTTGAGAATTACCCATCGACTTTGACAGACCATTTAAATTTCTTGAATCCTTCCTTCCAAAATGATTTTGTTCATTTACTCAATAGTGATTTCACGTTTATTTATATTGCTTGGTTAAAATACAATACTCTAAAACAGTCGATTTGTTGACTCATTTAAtcacattaaaacacatttcctTTTCTTTTGACTGTGTGCTACTACAGGCGGCAACCTGATCTCatagcatttcgtattattctgtatggaTATTTTTATGTGTaaatattaatttgtggatgtccatccatTTCAGGTAATATGTtatgagttacaattcatatggtatgttacgaattgcagttctatgatatgttatgaatttcaaTTGTAAACTATGTTATGAACGCAATACGTAGGATATGTTGCCAATTCCAATTTGTTGTAactaatgctaatgttagctaggctaggggttacgGTTAGGAGTGAGgtgaaagggttaaggttaggagttatgTTCAAGGTTAgcgttaggggaagggttagctaacatgctaagtagttgcaaagtagctaaaaagtagtaagtagatGCAAAGCTGGTAATTGGACAAAATGCTAGTTGTCCATGAGATTTGAACACTCAAtttttgggttgctagacatttgcTTATACGACTAACCAACCTCATTTTTGCATGAAAGGAGAATTTTCCTGAATTTCTGAAGTCAATCAGCAGAGGGAGGGCGGGTGTTCCCcccagcagagggaacacccccctatccacatcgatggaacagtagtggagagggtagtaagttttaagttcctcggcgtacacatcacagacaaactgtattg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106570113 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473854.2 True 3332 mRNA 0.41 4 41182848 41188172

Neighbor

gene id symbol gene type direction distance location
efna5b LOC106585191 coding upstream 98400 40975379 ~ 41084448 (+)
fbxl17 fbxl17 coding upstream 296421 40568637 ~ 40886427 (+)
slc35d2 LOC106585185 coding upstream 649004 40527838 ~ 40533844 (+)
ccl27a ccl28 coding upstream 658566 40520974 ~ 40524282 (+)
avp neu4 coding upstream 663309 40517591 ~ 40519539 (+)
LOC110525974 selenop coding downstream 270115 41458287 ~ 41461918 (+)
LOC118964869 NA coding downstream 327567 41515545 ~ 41522572 (+)
oxct1a LOC106580620 coding downstream 382832 41571004 ~ 41677673 (+)
plcxd3 plcxd3 coding downstream 490601 41678773 ~ 41700121 (+)
c7a c7-2 coding downstream 535001 41723173 ~ 41729381 (+)
G506635 NA non-coding upstream 43508 41139119 ~ 41139340 (+)
G506627 NA non-coding upstream 58359 41124282 ~ 41124489 (+)
G506622 NA non-coding upstream 63445 41119064 ~ 41119403 (+)
G506602 NA non-coding upstream 92666 41089899 ~ 41090182 (+)
G506524 NA non-coding upstream 93897 41086417 ~ 41088951 (+)
G507632 NA non-coding downstream 83730 41271902 ~ 41272129 (+)
G507634 NA non-coding downstream 85492 41273664 ~ 41273958 (+)
G507636 NA non-coding downstream 86923 41275095 ~ 41275435 (+)
G507637 NA non-coding downstream 88116 41276288 ~ 41276523 (+)
G507699 NA non-coding downstream 243964 41432136 ~ 41433278 (+)
G506285 NA other upstream 616419 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 635335 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 923798 40256994 ~ 40259050 (+)
G506095 atp5a1 other upstream 978962 40196800 ~ 40203886 (+)
G507768 LOC105030512 other downstream 281379 41469551 ~ 41471408 (+)
G508559 dph7 other downstream 941053 42129225 ~ 42131940 (+)
G509160 NA other downstream 1378933 42567105 ~ 42570169 (+)
G510416 NA other downstream 2469296 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3996267 45184439 ~ 45185869 (+)

Expression


Co-expression Network