c7a (c7-2)


Basic Information

Item Value
gene id c7a
gene name c7-2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41723173 ~ 41729381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124407.1
CTCTCAACATGAAGgactgtctgtcagtctctctgatCTGTCTGTCATGGCTCTTCTTTGGGATGTTCTCACCCATTAATTGTGTGGAGCCAGTGCATTGCCAGTGGGGATCCTATGGAGACTGGTCAGAGTGTGATGGCTGCACTAAAACACAGTCTAGGGCTCGTGCCATGGTGGTATATGCCCAGTTTGGGGGGAGCCCATGCAGTGGAGGGGCCACTCAGACCCAGCCCTGTGTGACTGCTCGAGGCTGCCCCCTGAAGGAAGGCTGTGGAGGGAGGTTCCGCTGCCGCTCAGGGAAGTGTATCAGCCAGTCTATGGTGTGTAATGGAGATCAGGACTGTGAGGAAGACAACCAGGATGAACTGAAGTGTGGCCCAGACAAGACATTCCCTGTTTGTAACAATGACAAACCACCACCCAATGTTGAGCAACTAGGACTGGGGTTTGATGCAGTGACAGGAAAGCAGAGAGGAAGTGTGATCAACACTAAGAGCTATGGAGGCCAGTGCAGGACTGTCCTCAGTGGGGACAACAAGGTCATCTACAGGCTGCCCCAGAGCACTCTGAGGTACAACTTTGAGGTCAAAGTTCAGAATGATTTCAGTGATGAATTCTACACCAGCTCCTGGTCCTACGCCAAGGACATAGTCAAGAGAGAGACAACGACGGGTACAACCACAGGATTCAACAACTATGACTTACATCAGACGGAGGAAAAAAACAGGAACAACCACCTGTTGGTGGTAAAGAACAACGTGGAGGTGGCTCAGTTCCAGAACCAGGCCCCAggatacctctctctgtctgaggagttCTGGAAGGTTCTGTCCACGCTCCCCACTGTGTACGACTACGCTACCTATAGGATGGTGGTGGAGAGGTTTGGAACCCACTACCTGTCTGAGGGGACCCTGGGTGGATACTTCCAAGCCTTACTCAGCATCGACCAGGAAACAGCCACACAGATGGCCAAGGTCACGTGGAAGTATAATGAGTGTACCAAGACCAAACACCGGATTCTGTTTGTTTCATGGACAACCGAGAAATGTAGAAAGGATGAAAAGGAATATACACTACCCAACCCCCCATCCATCAGTAGGTCTGACACGGTAAAGAAGGTGGATGTGGAGGGAGGGGCCACTGCACACATCGCAGCCCTCAAGGCTCTGGACCTCAACACTCCAGGTAGAAACTGGGATATGTACAAGAACTGGGCGGAGTCTGTGCGGACCTTCCCTGCAGTCATCAAACGAAAGATGAGGCCTCTGTATGAGCTGGTGAAGGAGGTGCAGTGTGCTGGGATGAAGAGGTTCCACCTGAAGCGTGCCATAGAGCAGTACCTGAATGAGAGGCACCCATGCCGCTGCCAGCCCTGCAGGAACAACGGCCTAGTGGTGATGGCTGGGGATAAGTGTAGCTGCATTTGTAAACCTGGGACAGACGGACTGGCCTGTGAGAAGGGGAAGGAGGTGGAGGGGCAGGAGGggGTGATACATGGCAGCTGGTCTTGCTGGTCTGGCTGGACTTCTTGCTCCGGAGGTCAGAGGTCACGAACACGTGCATGCAGTAACCCCGCCCCTCAGAGAGGCGGCCATCACTGCAACGGAGAGGTCAGGGAGACCACAGGCTGCGATGACGACCAAGACCTGCAATACCTCCAGACCATGGAGCCTCAGTGCTTTGACCTGACCGTCCCACCTAAGGAGACCTGCAGgagcccacctcctctccctaaTGGCTATGTCCTGGATCCAAAAGATGTGTATCTGGTGGGCAGTAAGATTGAATACACCTGCATAGAGGGCTACCATCTGATTGGAATAAGGATCGCAGAGTGCACTGTTGCTCTGACATGGAGCACACCTTCCAAAGAGTGCAAGAGCTCCAGGTGCCATGTCCCGTCCCTTCTAAATGATGTCACAGGCTCTCCCTGGCAGCCCACCTATGACATAGGGGAACGTATCCCACTGTCCTGCCCTAAGGGGAGACACATAGTGGGAGACAAAGAGATCATCTGTGACTCCAGTCTGCACTGGTCACCggaccccaacaccatcacatGTAGCCAGGCACCGAAAACGCTTGATCACCTTGACGGCCCAGCAGGGCAATGCAAACCATGGGAGAAACTTGCCAAAGACAAATGTATCTGCAAAATGCCTTATGAGTGCACGTCTTCTCTACAGGTGTGTGCCAACAATCTTGAGAATGGTCGGACAAATAGACTGAGCGTGTGCAAGATGCACACCTTAAATTGTCTGGGAAGGAGCTACAACCTGGCGGAGGACAGCGCCTGCGAGTGGCCAACCAACACAACTTCACCCTGCACCGACTGCCAGTTATGGGAGACTTGTGACGGACAAACAAACCAGTGTCGCTGTAAGGACTGGGCTGAGTGCTCAGATCCAGGGTTGAGTGTCTGTGTCCGTATGGGGGATGATGCTAACAGTGCCACCCAGACACTGAGCGAGTGTGAggcaggactgaggaggtgtaaAGGAGAAAAGGTGTCAGTTGTCAGCATACTACCTTGTAGCGCCTAAGAATCGTGTCCTCTCCTCCAACTCACCATGTCTGTGATAATGACAGAAAACACCCTCCTTCAGTTGTTTTACCCTATCTCTGTTTTTTATATCACTCTTCAAAAGCATTGCTTTGAAGACATTAAAGCCATTGAAGTATATTAACCACCCATTAGACTTGTTCTTTTTGTATGCTTTTTGAATGGATTGATAATGCTTATTTTTGTGCCAATAAACAAAAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0005579 membrane attack complex cellular_component

KEGG:

id description
K03996 C7; complement component 7

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124407.1 True 2767 mRNA 0.52 17 41723173 41729381

Neighbor

gene id symbol gene type direction distance location
plcxd3 plcxd3 coding upstream 23052 41678773 ~ 41700121 (+)
oxct1a LOC106580620 coding upstream 45500 41571004 ~ 41677673 (+)
LOC118964869 NA coding upstream 200601 41515545 ~ 41522572 (+)
LOC110525974 selenop coding upstream 261255 41458287 ~ 41461918 (+)
LOC110525969 NA coding upstream 535001 41182848 ~ 41188172 (+)
LOC118964870 NA coding downstream 25298 41754679 ~ 41757203 (+)
htr1aa LOC106585208 coding downstream 42336 41771717 ~ 41773955 (+)
paxx ci142 coding downstream 407672 42137053 ~ 42143608 (+)
LOC110525988 LOC106584966 coding downstream 515124 42244505 ~ 42249266 (+)
stxbp1b LOC106585214 coding downstream 643150 42372531 ~ 42415108 (+)
G507747 NA non-coding upstream 165597 41553432 ~ 41557576 (+)
G507797 NA non-coding upstream 216995 41505901 ~ 41506178 (+)
G507794 NA non-coding upstream 223152 41499560 ~ 41500021 (+)
G507790 NA non-coding upstream 226436 41496387 ~ 41496737 (+)
G508104 NA non-coding downstream 27850 41757231 ~ 41757833 (+)
G508300 NA non-coding downstream 90402 41819783 ~ 41820050 (+)
G508301 NA non-coding downstream 90758 41820139 ~ 41820424 (+)
G508312 NA non-coding downstream 97471 41826852 ~ 41827335 (+)
G508355 NA non-coding downstream 130203 41859584 ~ 41859819 (+)
G507768 LOC105030512 other upstream 251765 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 863651 40568637 ~ 40886427 (+)
G506285 NA other upstream 1156744 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1175660 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1464123 40256994 ~ 40259050 (+)
G508559 dph7 other downstream 399844 42129225 ~ 42131940 (+)
G509160 NA other downstream 837724 42567105 ~ 42570169 (+)
G510416 NA other downstream 1928087 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3455058 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3488346 45187119 ~ 45236944 (+)

Expression


Co-expression Network