LOC118964870


Basic Information

Item Value
gene id LOC118964870
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41754679 ~ 41757203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052109.1
ccactaggctagtgaAAGACCTTGAGGAAGATGCAGGAATCCGGCAGAGTGTGAAAGGATACACTGATAATATGCTGGTGATTTTCTGTTGTTGCAGCTTAATTTGCTTACAgtagtgtgtctgtgttactAGCCTGGCCAGATGCCACTAAGCTGAGGTTTTATGAATTTATGTCACTCTGTCTCAGCACATATTTGGAGAGGTCCTGTGCCACATAGAAGTGGCCTTGGATGGACGCTACGCCGCCGTGAGACGAGCAGAGTGCAACCTGGGTAATCTGGTCATCTATGCCATGCTGGAGGCCACTCATGCTGAGGTGGCTTTTTTAAAACTCAGGGCTTGGAGAACGGAATCCGCAACTACCTTGCTCTGGATGGAAGATTTCCCCAGGTTTCTGGGATCCATTTTGGCTTTGATCTCATTGGAAAACCTGGCAGAGTCATCGCTGAGACTGTGAAGGTTCAAGGGCAACGATGACTACACCATGTTCAGTGGCGGACCTCATGGGCACATAAGGCACGTTTTATGAATTTATGTCACTCTGTCTCAGCACATGCTTGGAGAGGTCCTGTGCCACATAGACGTGGCCTTGGATGGATGCTACGCCGCCGTGAGACGAGCAGAGTGCAACCTGGGTAATCTGGTCATCTAGGCTATGCTGGAGGCCACTCATGCTGAGGTGGCTTTTTTAAACTCAGagcaGACTTGTTGAATACAGAAAGAGTTTGGCATCCAGGTTAGAAACAAGCCATCAATCAACAGGTGTAGgttcttcatttgatcactcttttgttactGCACAGTAGGAAATCAGAACCTGTCAACCGTCCTTATCAACCACTTTGAGTCTGGCCGTATAGTCAGATGCATGAAGAGGTGCAAGTCTGGTCACATGATGGGCCTTATCAAGGTGTCCACCACCCCCTCTGTGTCTGCCATTGAGAGATCCAAGAAtgagagtctggagggagaggtgggagtgGCTGTGGTGCCCGGAGTGGAGGGCAGGATATTCCACGTCCACCCTGAGGGCCATTCAGAAACAGAAAGCTAACAGTAGGCAGGGCTGTTCCTCGTCTGAGAATTCCACAGAGCAACTAAGCCAGGGCTCCATAGTCACCGTGGGAACCAGGGGACATTACATCAAGTCTTTTGCATCTCTCATCTACTGCTTGCTTTTATCAGCCTCATAAACAAGGCAGATTGTCAATAAACACAGAAACATGAGATTAAAGTCATTCATTGTATTACTTCCAGGAACATTGTGCAATTCATTGACATTGCACTCGAAATGACTCTAACTGTGAACATCGAAAACTAGTATATtaccaaaaatgtatttattttgaatGATAAGCAGAGAGGGTCTACATTTGTGACGTAAGACGGTGTTGGTGTATCAGTATTTGAATGGAGGAAATAAGAAGAAGTGTCTACATGTGTCCATGATAACATTACAGTAATAAAGTCAG

Function

NR:

description
PREDICTED: trifunctional nucleotide phosphoesterase protein YfkN-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052109.1 True 1473 mRNA 0.46 6 41754679 41757203

Neighbor

gene id symbol gene type direction distance location
c7a c7-2 coding upstream 25298 41723173 ~ 41729381 (+)
plcxd3 plcxd3 coding upstream 54558 41678773 ~ 41700121 (+)
oxct1a LOC106580620 coding upstream 77006 41571004 ~ 41677673 (+)
LOC118964869 NA coding upstream 232107 41515545 ~ 41522572 (+)
LOC110525974 selenop coding upstream 292761 41458287 ~ 41461918 (+)
htr1aa LOC106585208 coding downstream 14514 41771717 ~ 41773955 (+)
paxx ci142 coding downstream 379850 42137053 ~ 42143608 (+)
LOC110525988 LOC106584966 coding downstream 487302 42244505 ~ 42249266 (+)
stxbp1b LOC106585214 coding downstream 615328 42372531 ~ 42415108 (+)
camsap1b LOC106585218 coding downstream 846105 42603308 ~ 42645904 (+)
G507747 NA non-coding upstream 197103 41553432 ~ 41557576 (+)
G507797 NA non-coding upstream 248501 41505901 ~ 41506178 (+)
G507794 NA non-coding upstream 254658 41499560 ~ 41500021 (+)
G507790 NA non-coding upstream 257942 41496387 ~ 41496737 (+)
G508104 NA non-coding downstream 28 41757231 ~ 41757833 (+)
G508300 NA non-coding downstream 62580 41819783 ~ 41820050 (+)
G508301 NA non-coding downstream 62936 41820139 ~ 41820424 (+)
G508312 NA non-coding downstream 69649 41826852 ~ 41827335 (+)
G508355 NA non-coding downstream 102381 41859584 ~ 41859819 (+)
G507768 LOC105030512 other upstream 283271 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 895157 40568637 ~ 40886427 (+)
G506285 NA other upstream 1188250 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1207166 40544863 ~ 40547513 (+)
LOC110525949 LOC106585178 other upstream 1495629 40256994 ~ 40259050 (+)
G508559 dph7 other downstream 372022 42129225 ~ 42131940 (+)
G509160 NA other downstream 809902 42567105 ~ 42570169 (+)
G510416 NA other downstream 1900265 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 3427236 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 3460524 45187119 ~ 45236944 (+)

Expression


Co-expression Network