ipo11 (ipo11)


Basic Information

Item Value
gene id ipo11
gene name ipo11
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 41889859 ~ 42124064 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606535.2
GGCACTATTGTACGTCATCAAAACGCGTCTTGCTTGCTGTGGATCGCGCCCTTCCAAGCGACAGCGTGTGCGTTTGTAGCTGCGAACAGCTGACACAAGATTAGTCAAGTTTCAGTGTTTCTATCAAGATATCATTTCTTAGGCGTCTCTAGGTATGGATATGGAGAGTGCCAGCTCGGTGGTCCTACAGGCCCTGACCCAGGCCACCAGTCAGGATACCGCTCTACTGAAGCCTGCTGAGGAGCAGCTACGACAGTGGGAGACACAACCTGGCTTCTATTCTGTACTGCTGAATAtcttcaacaaccacatgttggATGTTAACGTCCGATGGCTTGCCGTGCTCTACTTCAAAAACGGCATCGACAGGTACTGGAGGAGAGTCGCGCCAAAtGCTCTGTCAGAAGATGAGAAGACGTCGCTGCGAGCTGGCCTGATCACCAACTTCAACGAGCCCGTCAACCAGATAGCCACCCAGATAGCAGTGCTGATAGCCAAGGTGGCTCGTCTGGACTGTCCCCGCCAGTGGCCAGAGCTGATACCCATCCTGCTTGAGTCAGTGAAGGGTCAGGATGGGCTGCAGCAGCACAGGGCTCTACTCACCTTCTACCACGTCACCAAGACCCTGGCCTCCAAGCGCCTGGCCCAGGACAAACGACTGTTTCAAGACCTGGCGTCGGGCATCTACAGCTTTGCCTGCTCCCTGTGGAGCCACCACACAGACTGCTTCCTCCAGCAAGTCCTAGCCGTGGATCAGGCCCATGCCCTCAGCTCACTGGAGAGGACTCTACTGTCACTTAAAGTACTTCGGAAGCTGACGGTCCATGGATTCCAGGAGCCACAACAGAATATGGAAGTGATGGGCTTCCTCAATGCAGTTTTTGAGAGACTGAAACAGTTCCTAGAATGCAGTCGGCAGGTAGACCCAGACAGCCCATGTCGAGAGAAGCTTGAGAAGACTATCATACTGTACACTAAAGTGttattagATTTCCTGGAGGTCCACCCGTGTGCGTTCATCCCACTGATCCAGCGCTCTCTGGAATTTGCTGTCAGCTACGTGTTCACGGCGGCCGGTGAGGGCCTCGTCTTCGAGCGCTTCACCGTCCAGTGCATGAACCTCATCAAAACCATCGTCAAGAACGAGGCCTACAAACCCTGCAAGAACATCGAGGACAGTAAGCCGGAGAGTCTGGAGGCCCACAAGATCAAGACTGCATTCTTTACACACCCCACCCTCACAGAGATCGGACGGCGTCTCGTCTCCCACTACTTTCTGTTGACCAAGGAAGAGCTGGCCATGTGGGAGGAGGACCCCGAGGGCTTCGCTGTTGAAGAAACAGGGGGTGACTCCTGGAAATACAGTCTACGGCCTTGTACAGAAGTGTTGTTCTTGGACATATTCCACAACTACAGTCAGACTCTGACACCAGTGCTGCTGGAGATGGTGCTGAATCTACAAGGACCAAGCAATGTGGAGGATCCTGTTCAGCTTCTGATGAAGGATGCAGTGTACAATGCAGTGGGGCTGGCGGCATACGAGCTGTTTGACAACATTGACTTTGACCAGTGGTTCAACAATCAGCTGCTGGGCGAGCTACAAGTGAGCCACCACAGGTACAAGCTGATTCGTCGGCGGGTGATCTGGCTCATAGGTCAGTGGATTTCAGTGAAGTTTAAATCCGAACTACGGCCGCTGCTCTACGAGGTCATCCTTAACCTCATGCAGGACCCAGACCTAgtgGTGCGGATCGAGACGGCCACAACTCTGAAACTCACTGTCGACGACTTTGAGTTCCGGACAGAACAGTTCTTACCGTATCTGGAGTCTATTTTCAGCCTGCTATTCCAGCTGTTGCAGCAGGTGACAGAGTGTGACACTAAGATGCAGGTCCTCCATGTGATCTCATGTGTCATTGAGAGGGTTAACATCCAGATCCGGCCATATGTAGGCTGTCTGGTCCAGTACCTGCCACTGCTTTGGAAACAATCAGAAGAACACAACATGCTGCGCTGTGCCATACTCACCACACTGGTTCACCTTGTACAGGGCCTGGGGGCGGAGAGTAAGAACCTGTATCTCTTCCTGCTTCCTGTGATCCAGCTGAGTACAGATGTCTCGCAACCACCGCATGTCTACCTGCTAGAGGACGGACTTGAGCTGtgGTTGGTAACGTTGGAGAATAGTCCGGCAATCACCCCAGAGCTGCTGAGAATCTTCCAGAACATGTCGGCTCTCCTGGAGATGAGCTCAGAGAACCTGAGGACATGCTTCCAGATAGTCAACGCCTACATCTACCTGTCAGCTACTGACTTCCTACAGAACTATGCTGAGGGCCTGTGCAGATCCTTCTGTAATCTACTCAAAGATATCACCAACGAAGGACAAGTCCAAGTTctgaaggtggtAGAAGTAGCTCTGAAGGTTAGCCCCGTGTTAGGAGCCCACATGTTCCAGCCCCTGCTGCCTTCTGTCTTCAGAGGGATCGTGGATGGAGAGcggTACCCGGTGGTGATGTCCACCTACCTGGGAATCATGGGAAGAGTCCTGCTGCAGAACGCtagtttcttctcctctctcctcacacagatGGCCAGCGAGTACAACCAGGAGaTTGGCCAGTTGTTAGGTGGTGTGATAGAGATGTGGGTTGACCGCATGGACAACATCACACAGCCGGAGAGGAGGAAACTGTCGTCTCTGGCTCTGCTCTCCCTCTTACCGTCAGACAACAGTGTGGTCCAGGAGAAGTTCTGTGGCATCATCAACATCTGTGTGGAGGCGCTGCATGACGTGATGACAGAAGACTCCGACACAGGAACCCTCAAAGACTGTATGTTGATGAGCCATTTCGAGGAACCCAAGCTGACTGACGATGAGGAGCCTCCCACAGAACAGGACAAGAGGAAGAAACTGTTGGCCCTGGAGGATCCGGTGCACAGTGTCTCCTTACAGCAGTATGTGTATGAGAAGCTGAAGGCCCAGCAGGCTCTGATGGGGGACCAGGGCTTTGGGGCTCTGATGGAGACGGTGGACACAGAGATCGTCAGGCAGCTCCAGGAGTTCCTACAGGGCctctgagagagatggagagaggagagactctACCTATCTCTACCCTTTCCCTCCTGTAACCTCAATGCATCCATCTCCAGACCTATACTATCTATCTCTCCTGATAGGCCTTTAGAGAGCACAGGAGAGAAAAGACCTCAACCTCTGCCCCCTACTAACCATCTCGGCTGTACCTTATCCGTAGCCTACCTTTCCTCTCCTCGACCCCCTATTGGGCACGGAAGAGAGAGGACTGCAACATGTACCTCTACTACCCATGTCTACTTTTACCCATAATTCACTTGTCCTTTACCCACAACCCCCTCTTCTCTACCAAACCCTACCCTAACTACAACCTACCTAGAACCTTCCTTTACCCACAAaccacctttttttttttaaacacacacagaaacatgaaTAGAGCTTCCATTCTAACAGTTATTCTGCTTCTCTAGTTTTAGCATGGGGTAAATACTTAGGAGGATGTTAAGAGACGGGGGATTGAGGGAATATAACAATACGACACAAAGACAACCTTCTGAAGAGGCAGGAgccttggattttttttttttttttactgggaAAGCGTGTGTGGCGTGATGGGAATATGGCTTCACTGACCGAAAGACCCAAACAGTGTTTACAGATCAATTCTTAAAGGCGAATAGCGAGCAAAAGTGTactttgtatgtatgtatgtatgtaaagtATGGATGACTCTGCATGAAGATATTTAACTTTTtagtttagctagctaatttCTCTTCATGGTTCTTTGTTCTGTATTGTTTCTCACACCCTGAGATCATCAAGTTGACAGGACTATTGAGAGATGCAGACACTGTTTTTGGGGCGTGTATATTTTCATATCATCGGACTATGAATTCAATTAATTGACTGCGAGATTAAAGCGATTTTTAacaagtgatttgtaaaagtgtTGAACCACATTTCTATATGAATGCTGCTGCTATTTTACGGTGTGTCACAAGGTGTGTCAGAGCACTTTAAaaacaaaactttttttttttcccccatttgTTTTATCTTCCTGAAATGTCATGGTTCTTCATGTCTCATGGTTGTAGCATGACGGTAGAAGAACTCGGGACATTGAAGCAGGATGGAAGTTATTCTTAGGCACAAATCTAGGATCAGCTAACCCCACTCTAATCCTACCCATTAGGGGTGGAAAAGCAAAACTGACCTCTGATCAGCATCTTGGGGCAACTTGATCCTACTCCCGGTTGTGTATGAAATGCCATATAATCATATTGAGGACATACATAAACTGAAGCGTGATTTGAGTGATGTTTTGGACAGAAACCGTTTTTCACAGGGATGACAGTGGACTAGAGAATCGGTTGCACTTCATTTAATGGTACATAAATGTCCATTGTCCAAACATTGTAATTATACAATAAGCTAGGAATGACTCTTCTTTGATATTCATTCGAACAAGCACCACTACCACTTGGTACCAGCCAGATGCAAATTGTGTTGAATTATTTGAAATAAATACCAGAAAGTAGCCATTGTTACCACGTAATAATCCTAGTAAATACAGTGGAAACTGGACTGTAAAATAAAGTGTTATCCAATTCTCTTCCCCTAGTTCCATAGACACTGTGATTGAGTTCAGTAGCAGTCAAGCAAAACAAAGGCCTTATGCTTTCAGCCTTACCTTAATTCTAATATCCTTTCTTTCCAATGTtgctttttttatatatatatatataaatatatatatatatatatatatatatattagctgATTTCTGTACTGGTATTAGAATGATGGGAGCAATGGTGACATTGAACACAACAGCAGTAGAAAATATGTCTTTAGCTAAATTCTAATAGAAAGACCTTGTTCTTTTTTTCAACAGCTTCAATAAAATGCAGTACATGGCTGAAA
>XM_036980135.1
GGCACTATTGTACGTCATCAAAACGCGTCTTGCTTGCTGTGGATCGCGCCCTTCCAAGCGACAGCGTGTGCGTTTGTAGCTGCGAACAGCTGACACAAGATTAGTCAAGTTTCAGTGTTTCTATCAAGATATCATTTCTTAGGCGTCTCTAGGTATGGATATGGAGAGTGCCAGCTCGGTGGTCCTACAGGCCCTGACCCAGGCCACCAGTCAGGATACCGCTCTACTGAAGCCTGCTGAGGAGCAGCTACGACAGTGGGAGACACAACCTGGCTTCTATTCTGTACTGCTGAATAtcttcaacaaccacatgttggATGTTAACGTCCGATGGCTTGCCGTGCTCTACTTCAAAAACGGCATCGACAGGTACTGGAGGAGAGTCGCGCCAAAtGCTCTGTCAGAAGATGAGAAGACGTCGCTGCGAGCTGGCCTGATCACCAACTTCAACGAGCCCGTCAACCAGATAGCCACCCAGATAGCAGTGCTGATAGCCAAGGTGGCTCGTCTGGACTGTCCCCGCCAGTGGCCAGAGCTGATACCCATCCTGCTTGAGTCAGTGAAGGGTCAGGATGGGCTGCAGCAGCACAGGGCTCTACTCACCTTCTACCACGTCACCAAGACCCTGGCCTCCAAGCGCCTGGCCCAGGACAAACGACTGTTTCAAGACCTGGCGTCGGGCATCTACAGCTTTGCCTGCTCCCTGTGGAGCCACCACACAGACTGCTTCCTCCAGCAAGTCCTAGCCGTGGATCAGGCCCATGCCCTCAGCTCACTGGAGAGGACTCTACTGTCACTTAAAGTACTTCGGAAGCTGACGGTCCATGGATTCCAGGAGCCACAACAGAATATGGAAGTGATGGGCTTCCTCAATGCAGTTTTTGAGAGACTGAAACAGTTCCTAGAATGCAGTCGGCAGGTAGACCCAGACAGCCCATGTCGAGAGAAGCTTGAGAAGACTATCATACTGTACACTAAAGTGttattagATTTCCTGGAGGTCCACCCGTGTGCGTTCATCCCACTGATCCAGCGCTCTCTGGAATTTGCTGTCAGCTACGTGTTCACGGCGGCCGGTGAGGGCCTCGTCTTCGAGCGCTTCACCGTCCAGTGCATGAACCTCATCAAAACCATCGTCAAGAACGAGGCCTACAAACCCTGCAAGAACATCGAGGACAGTAAGCCGGAGAGTCTGGAGGCCCACAAGATCAAGACTGCATTCTTTACACACCCCACCCTCACAGAGATCGGACGGCGTCTCGTCTCCCACTACTTTCTGTTGACCAAGGAAGAGCTGGCCATGTGGGAGGAGGACCCCGAGGGCTTCGCTGTTGAAGAAACAGGGGGTGACTCCTGGAAATACAGTCTACGGGTGCGGATCGAGACGGCCACAACTCTGAAACTCACTGTCGACGACTTTGAGTTCCGGACAGAACAGTTCTTACCGTATCTGGAGTCTATTTTCAGCCTGCTATTCCAGCTGTTGCAGCAGGTGACAGAGTGTGACACTAAGATGCAGGTCCTCCATGTGATCTCATGTGTCATTGAGAGGGTTAACATCCAGATCCGGCCATATGTAGGCTGTCTGGTCCAGTACCTGCCACTGCTTTGGAAACAATCAGAAGAACACAACATGCTGCGCTGTGCCATACTCACCACACTGGTTCACCTTGTACAGGGCCTGGGGGCGGAGAGTAAGAACCTGTATCTCTTCCTGCTTCCTGTGATCCAGCTGAGTACAGATGTCTCGCAACCACCGCATGTCTACCTGCTAGAGGACGGACTTGAGCTGtgGTTGGTAACGTTGGAGAATAGTCCGGCAATCACCCCAGAGCTGCTGAGAATCTTCCAGAACATGTCGGCTCTCCTGGAGATGAGCTCAGAGAACCTGAGGACATGCTTCCAGATAGTCAACGCCTACATCTACCTGTCAGCTACTGACTTCCTACAGAACTATGCTGAGGGCCTGTGCAGATCCTTCTGTAATCTACTCAAAGATATCACCAACGAAGGACAAGTCCAAGTTctgaaggtggtAGAAGTAGCTCTGAAGGTTAGCCCCGTGTTAGGAGCCCACATGTTCCAGCCCCTGCTGCCTTCTGTCTTCAGAGGGATCGTGGATGGAGAGcggTACCCGGTGGTGATGTCCACCTACCTGGGAATCATGGGAAGAGTCCTGCTGCAGAACGCtagtttcttctcctctctcctcacacagatGGCCAGCGAGTACAACCAGGAGaTTGGCCAGTTGTTAGGTGGTGTGATAGAGATGTGGGTTGACCGCATGGACAACATCACACAGCCGGAGAGGAGGAAACTGTCGTCTCTGGCTCTGCTCTCCCTCTTACCGTCAGACAACAGTGTGGTCCAGGAGAAGTTCTGTGGCATCATCAACATCTGTGTGGAGGCGCTGCATGACGTGATGACAGAAGACTCCGACACAGGAACCCTCAAAGACTGTATGTTGATGAGCCATTTCGAGGAACCCAAGCTGACTGACGATGAGGAGCCTCCCACAGAACAGGACAAGAGGAAGAAACTGTTGGCCCTGGAGGATCCGGTGCACAGTGTCTCCTTACAGCAGTATGTGTATGAGAAGCTGAAGGCCCAGCAGGCTCTGATGGGGGACCAGGGCTTTGGGGCTCTGATGGAGACGGTGGACACAGAGATCGTCAGGCAGCTCCAGGAGTTCCTACAGGGCctctgagagagatggagagaggagagactctACCTATCTCTACCCTTTCCCTCCTGTAACCTCAATGCATCCATCTCCAGACCTATACTATCTATCTCTCCTGATAGGCCTTTAGAGAGCACAGGAGAGAAAAGACCTCAACCTCTGCCCCCTACTAACCATCTCGGCTGTACCTTATCCGTAGCCTACCTTTCCTCTCCTCGACCCCCTATTGGGCACGGAAGAGAGAGGACTGCAACATGTACCTCTACTACCCATGTCTACTTTTACCCATAATTCACTTGTCCTTTACCCACAACCCCCTCTTCTCTACCAAACCCTACCCTAACTACAACCTACCTAGAACCTTCCTTTACCCACAAaccacctttttttttttaaacacacacagaaacatgaaTAGAGCTTCCATTCTAACAGTTATTCTGCTTCTCTAGTTTTAGCATGGGGTAAATACTTAGGAGGATGTTAAGAGACGGGGGATTGAGGGAATATAACAATACGACACAAAGACAACCTTCTGAAGAGGCAGGAgccttggattttttttttttttttactgggaAAGCGTGTGTGGCGTGATGGGAATATGGCTTCACTGACCGAAAGACCCAAACAGTGTTTACAGATCAATTCTTAAAGGCGAATAGCGAGCAAAAGTGTactttgtatgtatgtatgtatgtaaagtATGGATGACTCTGCATGAAGATATTTAACTTTTtagtttagctagctaatttCTCTTCATGGTTCTTTGTTCTGTATTGTTTCTCACACCCTGAGATCATCAAGTTGACAGGACTATTGAGAGATGCAGACACTGTTTTTGGGGCGTGTATATTTTCATATCATCGGACTATGAATTCAATTAATTGACTGCGAGATTAAAGCGATTTTTAacaagtgatttgtaaaagtgtTGAACCACATTTCTATATGAATGCTGCTGCTATTTTACGGTGTGTCACAAGGTGTGTCAGAGCACTTTAAaaacaaaactttttttttttcccccatttgTTTTATCTTCCTGAAATGTCATGGTTCTTCATGTCTCATGGTTGTAGCATGACGGTAGAAGAACTCGGGACATTGAAGCAGGATGGAAGTTATTCTTAGGCACAAATCTAGGATCAGCTAACCCCACTCTAATCCTACCCATTAGGGGTGGAAAAGCAAAACTGACCTCTGATCAGCATCTTGGGGCAACTTGATCCTACTCCCGGTTGTGTATGAAATGCCATATAATCATATTGAGGACATACATAAACTGAAGCGTGATTTGAGTGATGTTTTGGACAGAAACCGTTTTTCACAGGGATGACAGTGGACTAGAGAATCGGTTGCACTTCATTTAATGGTACATAAATGTCCATTGTCCAAACATTGTAATTATACAATAAGCTAGGAATGACTCTTCTTTGATATTCATTCGAACAAGCACCACTACCACTTGGTACCAGCCAGATGCAAATTGTGTTGAATTATTTGAAATAAATACCAGAAAGTAGCCATTGTTACCACGTAATAATCCTAGTAAATACAGTGGAAACTGGACTGTAAAATAAAGTGTTATCCAATTCTCTTCCCCTAGTTCCATAGACACTGTGATTGAGTTCAGTAGCAGTCAAGCAAAACAAAGGCCTTATGCTTTCAGCCTTACCTTAATTCTAATATCCTTTCTTTCCAATGTtgctttttttatatatatatatataaatatatatatatatatatatatatatattagctgATTTCTGTACTGGTATTAGAATGATGGGAGCAATGGTGACATTGAACACAACAGCAGTAGAAAATATGTCTTTAGCTAAATTCTAATAGAAAGACCTTGTTCTTTTTTTCAACAGCTTCAATAAAATGCAGTACATGGCTGAAA

Function

symbol description
ipo11 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytosol and nuclear envelope. Orthologous to human IPO11 (importin 11).

NR:

description
importin-11

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K25201 IPO11, RANBP11; importin-11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606535.2 False 4976 mRNA 0.48 29 41889859 42124064
XM_036980135.1 True 4604 mRNA 0.47 25 41889859 42124064

Neighbor

gene id symbol gene type direction distance location
si:dkey-250l23.4 LOC106584965 coding downstream 120648 41759479 ~ 41769211 (-)
rgs7bpa LOC106585207 coding downstream 136899 41735103 ~ 41752960 (-)
c6h5orf51 LOC106585203 coding downstream 319202 41566051 ~ 41570657 (-)
fbxo4 fbxo4 coding downstream 323866 41562084 ~ 41565993 (-)
ghra LOC106585200 coding downstream 349709 41474979 ~ 41540150 (-)
dph7 dph7 coding upstream 5154 42129218 ~ 42139055 (-)
LOC110525987 LOC106585210 coding upstream 22438 42146502 ~ 42241438 (-)
npdc1b LOC106585212 coding upstream 128419 42252483 ~ 42301749 (-)
LOC110525990 LOC106585213 coding upstream 178857 42302921 ~ 42360392 (-)
LOC118964871 NA coding upstream 280775 42404839 ~ 42417077 (-)
G508747 NA non-coding downstream 26725 41862918 ~ 41863134 (-)
G508743 NA non-coding downstream 31281 41858277 ~ 41858578 (-)
G508742 NA non-coding downstream 31855 41857774 ~ 41858004 (-)
G508339 NA non-coding downstream 47771 41841856 ~ 41842088 (-)
G508316 NA non-coding downstream 62310 41827314 ~ 41827549 (-)
G508888 NA non-coding upstream 18319 42142383 ~ 42143840 (-)
G509045 NA non-coding upstream 262009 42386073 ~ 42386706 (-)
G509034 LOC106585214 non-coding upstream 274912 42372441 ~ 42403220 (-)
G509058 NA non-coding upstream 293761 42417825 ~ 42418041 (-)
G508303 NA other downstream 68649 41820855 ~ 41821210 (-)
G507906 selenop other downstream 427937 41421024 ~ 41461922 (-)
znf131 znf131 other downstream 450845 41431651 ~ 41459095 (-)
G507063 NA other downstream 1347530 40540659 ~ 40542329 (-)
G506785 NA other downstream 1999928 39887022 ~ 39889931 (-)
G508891 NA other upstream 20033 42144097 ~ 42144885 (-)
G509432 NA other upstream 519455 42643519 ~ 42645869 (-)
G509902 NA other upstream 952628 43076692 ~ 43077157 (-)
G509949 LOC106578716 other upstream 998482 43122546 ~ 43123092 (-)

Expression


Co-expression Network