LOC110525988 (LOC106584966)


Basic Information

Item Value
gene id LOC110525988
gene name LOC106584966
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42244505 ~ 42249266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606542.2
TCAGCTGTACTATCCAAATGACTGTCAGAAAGTCACAACCAAGGGTGTGGTCTGTGGTAAGTGCATGttgagagagaacagaaagatgATGCGGTGAAAAGGGAGcaaaaaaaaggggtaaaaacagGATTTCCTACACACTGGTATGTGCCGCTGCCTACGTTACTATATAATCTCACAGGAGAAAAGTCATCTTCAGTGAGTCTTACCTCCACAGGACAGCAAACGCTGACAGACGCCCTTCGGACCTCACCCAGGGAGGAAATATTACACTATTTGAGTAACAATCCCGGGGAGATTGTGTGATTCTGGACAAAACGAAAGTACGCCGCAATTCCACCAGTCAGTCTGTTGCCTGCCTGTCATCCCCTGGGTCAGAGATGACTGCCTCCAAGCCCCTGTTCCTCTCAGCCATTATGATCCTCAGCATCTCCTCTTATGTGCTCCACCAGAGGCTCCTACTGCTGGCTCAGACAGGGATCGCTCATCAACACGAACCCAGGAACCTCACCATCCTGCTGTGGCACTGGCCCTTCGGCCGTCCCTACAGCCTGGAGGGAGATGTGTGCAGCGACGAGTACGCTATCCCAGACTGCCTCCTCAGTGACAACACCTCCCTGTTCCCCCAGGCAGACGTGGTGGTCTTCCACCACCATGAGCTGAAGACGGGCCGCTCTGTCCTGCCTCTCCACCTCCCCCGGTCAGTCTCCCAGCGCTGGCTCTGGTTGTCCCTTGAGCCCCCGGTGCACAATGGCAACCTGACCCAGTACAACGGACTGTTCAACTGGACCATGAGCTACCGAGGCGACGCTGACATATCCATGCCCTATGGGAAGATAGTTCCGGTTCCACATAACGGTATCAGTAACGGCAGCAGCTATGTGATCCCCAAGAAGGGGGCTTGTCTGGCCAGCTGGGTGGTCAGCAACTACAGGCCGGACCATGCCAGGAGTCAAGTCTACCAGAGCCTGAGGAAGTACATTCCCATAGAGGTGTATGGACACTGGTCAAAGAGGCCACTGACCGACCAAAGTCTGATACCCACCATTGGCCACTGTAACTTCTACCTGGCTTTTGAAAACTCAGTGGCATTGGACTACATAACTGAGAAGTTGTGGAGGAATGCCTACCAAGCAGGGGCAGTACCTGTGGTTCTGGGGCCCACTCGGGCTAACTATGAGGCCCTTGTGCCACCAGGCTCGTTCATCCATGTCAGTGACTTCAATAGCACAGAGGGGCTGGCTGTCTTCCTACAGCAGTTGGCCACAGACAGAGGACGCTACGAGGGTTACTTCAAGTGGCGTCAGACACATAGAATCAAGATGTAcacagactggagagagaggctcTGTAATATCTGTGTCAACTATCAAAGACTACCAGGTAACAAGGTGTACTACGATCTGGAGGCATGGGCCAGTAGATAACATCATAGATGCTTTTGCTACTGTAGGTTGTTTTGTACTACAACATGTTCAAGAACTTGTACAGTAGCCTGTTTTTTCCCCCATACAAAACAGCAGTCTGCAGTGAAACTTGAAATGCATTCAGTGCTtctgcacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtaagaagggctacataaatacatttgatttgatttggttcagTTCTGGTGGTGAGCCACTTTCACATCAGCTTGATGACATTACAACATTGACTTTTGTTCCTTAATTCAGAAACACCACAGGAAAATCACAACTTCTGTAAAAGAGGGAAGTCATTCCTCTAACACCCATCTTtctgacacaatacatttttagtTCATATGTTAGATGCTTTGatttattattagtagtagtatgtaTTTTTTTCTGTATTTAATCAGGTTGACAAATGTGGGTGGGCAAGTGGGAGGGATAGGGAAGGCTCAGGGGACAAACAAGGGATTTTCGGGTTTCGGAGCGGTTTCActtttgtaaaaatgtatgcTTTAAAACTTCCCATGATGCAATTGTAATGGCACAAGACAATGTCTTTCCCGGCAGTAATATTGAATCTATGAAAGCTTACCCTCAATATTATTGTCGGGAAAGACAACATTGTCTTGTGCCATTACAATTGCACCATGGTCTAGCTAGCCGACACGGTTGTGTCATTTCCTTATTTCCATCATTTTCTTTTTCGTCCTTTTTTATTgaagtttttttttattgaagtTTTAAGTATACAGTATAGTTCATACCCTTTCTTTAGGCATAATGACTAATGCAAGTAAGTTGCCAACCTTAGCATGACTTACTCGACTTAAGCCCTTGGCTCTTATGGGGAGAATAAGGCAGTTGATGAATGTCCTCCATCACACTTGGTTCAAGGTTTTTCCAGATCACACCAATTGAGGCCGTTCTCTCTCCTCCCAAGTCCTTCTGGGTCAACCCCTGTTTCTTTTCCCCTGAAAAAGAATAGTAAACCATAAACAAAATCCCTGTGCCAACACTCACGCAATCCCTCTCAGAGAGATTACTGTGCATTAAAAGTGCTGCATGTCACTCAATTCAAACGACCTCCTCTGTAACCTGATGTAACTGTATGACCAATAGTGATGCATATTATTGGATTTCTAGTTCCAATGAAAGTTACACACACCAACGTTgcatctcaaatggtaccctattccctacatagtgtaatgtatagggaatagtgtgccatttgggatacacacTTAGTTTCCGGAGATGTTGCTTTATAATCTCTATATCTATGGATTCAGGGAACAATAATTGACCACTATGCACATATAGCTCTGGCCACCAGATGTCATGATTGCCTAAAAACTGAATGACATATGGAAACAAGAAAGATATGCTTTTTACATttcttcagtggtgtaaagtactttactatttatattttcaaaatggtttacttttacttcactacattcctaaagaaatgtactttttactccatacacttTACCCGACACCCAAAAAGACACCcaaaaagaaaaaatatatactgtcAAGGTGGTGTGTAAACAAAACTGCTTAAAAATTTGGCAAGATAAGAAGTTGGGGTATGGGGGAGACAAAATACTGATACCTACTTGAATGCTTAGAAGGACAAGAAAGTGATCCagttcacgcacttatcaagagaacatccctggctatccctactgcctctgatctggcgactcactaaacacaaatgctttccTCTCAAAATATCAACATTTCCTGTCTTTTTCTCCTCACTTTGAAAACatctacagtcctattgatcTGGTTGGTTACTGATCTGATTGGTTACTAATAATATCATTTAAAATCCCTCAAATTGTGTCCCATATGTGtttagagtgttggagtgtgcccctggctatccgtaaattttaaaaacaagaaaattgtgctgtct

Function

NR:

description
alpha-(1,3)-fucosyltransferase 7-like

GO: NA

KEGG:

id description
K07635 FUT7; galactoside alpha-1,3-fucosyltransferase 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606542.2 True 3424 mRNA 0.44 2 42244505 42249266

Neighbor

gene id symbol gene type direction distance location
paxx ci142 coding upstream 100897 42137053 ~ 42143608 (+)
htr1aa LOC106585208 coding upstream 470550 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 487302 41754679 ~ 41757203 (+)
c7a c7-2 coding upstream 515124 41723173 ~ 41729381 (+)
plcxd3 plcxd3 coding upstream 544384 41678773 ~ 41700121 (+)
stxbp1b LOC106585214 coding downstream 123265 42372531 ~ 42415108 (+)
camsap1b LOC106585218 coding downstream 354042 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 396768 42646034 ~ 42655499 (+)
LOC118964872 NA coding downstream 529995 42779261 ~ 42780791 (+)
LOC110525999 LOC106585222 coding downstream 561048 42810314 ~ 42825158 (+)
G508558 LOC106585210 non-coding upstream 97261 42145407 ~ 42147244 (+)
G508561 NA non-coding upstream 99272 42144051 ~ 42145233 (+)
G508562 NA non-coding upstream 116908 42125122 ~ 42127597 (+)
G508554 NA non-coding upstream 120479 42123517 ~ 42124026 (+)
G508542 NA non-coding upstream 139413 42104868 ~ 42105092 (+)
G508677 LOC106585213 non-coding downstream 70626 42319892 ~ 42332493 (+)
G508717 NA non-coding downstream 122698 42371964 ~ 42372193 (+)
G509060 NA non-coding downstream 169455 42418721 ~ 42418976 (+)
G509061 NA non-coding downstream 170326 42419592 ~ 42421183 (+)
G509062 NA non-coding downstream 172076 42421342 ~ 42422146 (+)
G508559 dph7 other upstream 112565 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 773097 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1384983 40568637 ~ 40886427 (+)
G506285 NA other upstream 1678076 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1696992 40544863 ~ 40547513 (+)
G509160 NA other downstream 317839 42567105 ~ 42570169 (+)
G510416 NA other downstream 1408202 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2935173 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2968461 45187119 ~ 45236944 (+)
G512912 NA other downstream 3386323 45635589 ~ 45636250 (+)

Expression


Co-expression Network