stxbp1b (LOC106585214)


Basic Information

Item Value
gene id stxbp1b
gene name LOC106585214
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42372531 ~ 42415108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606545.1
CCTACAGTCCTACACAGTATTAGCGGTGGTTGGGTAGagtagagagggaaagaaagaaaagggGAGGCGGAGACACGGCCACGACAGAGACATCATCACCATGGCACCACTCGGACTTAAAGCCATTGTGGGAGAAAAGATTATGAATGATGTCATCAAGAAGGTGCACAAGAAGGGCGAATGGAAGGTTCTGGTAGTAGACAAGCTAAGCAtgaggatgatgtcatcctgcTGTAAGATGACAGATATCATGTCAGATGGCATCACCATTGTTGAAGACATTGGCAAGAAGCGAGAGCCTCTCCCCAGTATGGAGGCCATCTACCTAATAACTCCCAATGATGAGACTGTGGAGGCACTCATAGATGACTTCAGAGACCCGCGGTCGCCCAGATACAGAGGAGCTCACGTCTTCTTCACTGACACAATCCCAGATACATTGTTCAATCTGTTGACAAAATCCCGTGCTTCCAAAGCCATGAAGACCTTGACTGAGATCCACATCGCCTTTCTGCCCTATGAGTCACAGGTGTTTTCCCTGGACAAGACAGATGCCTTCCAGGACTTCTACAGCCCCTACAAGGCTGACATCAAGCACAACATGTTGGCGCGTTGTGCTGAGCAGATCGCCACTCTCTGCAACACCCTGAAGGAATACCCTGGCATCAGATACAGAGGGGAGTACAAAGACTGTGCCACTCTGGCTCAGCTCCTGCAGGACAAGCTAGACGGCTACAAGGCAGACGACCCCACCATGGGAGAGGGTCCGGACAAATCTCGCTCTCAACTCCTGATTCTGGACCGAGGCTTTGACCCAGTCTCTCCCATCCTCCATGAACTCACCCTCCAAGCCATGGGCTATGACCTGCTGGGCATCGAGAACGACGTCTACAAgtaTGACACCAGTGGGATGGGGGAGGTCAAGGAGAAGGCGGTGTTGCTGGATGAGGATGATGACCTGTGGATGAGTCTCAGACACAAGCATATTGCCGAAGTCACCACGGCTGTGACCCGCTCCCTCAAAGAATTCTCAGCCACCAAAAAGATGAACACAGGAGAGAAGACCACAATGAAAGACTTGTCTCAGATGCTGAAGAAGATGCCGCAGTATCAGAAAGAGCTAAGCAAGTACTCTACCCACCTCCACCTGGCTGAAGACTGTATGAACCGATATCAGGGCACGGTGGACAAGCTGTGTCGTGTTGAGCAGGATCTAGCGATGGGTACAGATGCAGAGGGGGAGAAGATCAAGGACCCCATGAGGGCCATCGTACCCGTCCTGCTGGATAAAGATGTCACTGTCTTCGACAAGATCCGCATAATCCTGCTGTACATCTTCATGAAGAACGGTGTTTCGGAGGAGAACCTCTGTAAGCTCCTCCAGCATGCCAACATCCCTCCTGAGGACAGTGACATCATCGCCAACATGGCCCATATGGGCATGCCCATCATCTTAGAGGGGAACCCGACCCGCAAAGTGAAAAAGACTGACCGGAAGGAGCGAGTGAGTGAGCAGACCTACCAGCTCTCCCGATGGACCCCTCTCATCAAGGACATCATGGAGGATGCCATTGAGGACAAACTGGATCCAAAGCAGTACCCCTACATCTCCCAACGCACTGCATCCACTCACAGCAGCGCTCCATCAAGTGCCCGGTACGGTAACTGGCATAAGAACAAGGGCCCCACAGAGATGAAGACAGGTCCCCgagtcatcatcttcatcatcggAGGCATGACCTTCAGCGAGATGCGCTGCGTCTACGAGGTCACACAAGCCAATGGAAAATGGGAAGCAATCATTGGttccacccacacactcactcccaCCAAATACCTAAAGGAGCTGCAGCACCCGGACTTCCTGGACCCCAACGCTGCCCCTGAGGAACCAGAGCCTGCCCCTGCAGAATGAGAACACACACTGAGAAgaTCAACCAATATCTTCACCCCTACACGCCTTCTTCAAGCCCTCAAAGACATGGATAAGCAACAAGATGTTTGAGCTGAACAGCTCCCTGGCTGCAGTTGTCCCTCTCCTAACCTCCAAACTCTCCCAACTGGCATACATGAATAGTCAGGACCCAAGACATAACAAGCCCTTCTACTCTATACATAAGACTGAAGAAAACAAATGGCAGCATCTATTTCTAGCATATCCAAGTCATGTATTCAGATATCATGTTTCAATAGAATTACATAAGATCC
>XM_021606548.1
CCTACAGTCCTACACAGTATTAGCGGTGGTTGGGTAGagtagagagggaaagaaagaaaagggGAGGCGGAGACACGGCCACGACAGAGACATCATCACCATGGCACCACTCGGACTTAAAGCCATTGTGGGAGAAAAGATTATGAATGATGTCATCAAGAAGGTGCACAAGAAGGGCGAATGGAAGGTTCTGGTAGTAGACAAGCTAAGCAtgaggatgatgtcatcctgcTGTAAGATGACAGATATCATGTCAGATGGCATCACCATTGTTGAAGACATTGGCAAGAAGCGAGAGCCTCTCCCCAGTATGGAGGCCATCTACCTAATAACTCCCAATGATGAGACTGTGGAGGCACTCATAGATGACTTCAGAGACCCGCGGTCGCCCAGATACAGAGGAGCTCACGTCTTCTTCACTGACACAATCCCAGATACATTGTTCAATCTGTTGACAAAATCCCGTGCTTCCAAAGCCATGAAGACCTTGACTGAGATCCACATCGCCTTTCTGCCCTATGAGTCACAGGTGTTTTCCCTGGACAAGACAGATGCCTTCCAGGACTTCTACAGCCCCTACAAGGCTGACATCAAGCACAACATGTTGGCGCGTTGTGCTGAGCAGATCGCCACTCTCTGCAACACCCTGAAGGAATACCCTGGCATCAGATACAGAGGGGAGTACAAAGACTGTGCCACTCTGGCTCAGCTCCTGCAGGACAAGCTAGACGGCTACAAGGCAGACGACCCCACCATGGGAGAGGGTCCGGACAAATCTCGCTCTCAACTCCTGATTCTGGACCGAGGCTTTGACCCAGTCTCTCCCATCCTCCATGAACTCACCCTCCAAGCCATGGGCTATGACCTGCTGGGCATCGAGAACGACGTCTACAAgtaTGACACCAGTGGGATGGGGGAGGTCAAGGAGAAGGCGGTGTTGCTGGATGAGGATGATGACCTGTGGATGAGTCTCAGACACAAGCATATTGCCGAAGTCACCACGGCTGTGACCCGCTCCCTCAAAGAATTCTCAGCCACCAAAAAGATGAACACAGGAGAGAAGACCACAATGAAAGACTTGTCTCAGATGCTGAAGAAGATGCCGCAGTATCAGAAAGAGCTAAGCAAGTACTCTACCCACCTCCACCTGGCTGAAGACTGTATGAACCGATATCAGGGCACGGTGGACAAGCTGTGTCGTGTTGAGCAGGATCTAGCGATGGGTACAGATGCAGAGGGGGAGAAGATCAAGGACCCCATGAGGGCCATCGTACCCGTCCTGCTGGATAAAGATGTCACTGTCTTCGACAAGATCCGCATAATCCTGCTGTACATCTTCATGAAGAACGGTGTTTCGGAGGAGAACCTCTGTAAGCTCCTCCAGCATGCCAACATCCCTCCTGAGGACAGTGACATCATCGCCAACATGGCCCATATGGGCATGCCCATCATCTTAGAGGGGAACCCGACCCGCAAAGTGAAAAAGACTGACCGGAAGGAGCGAGTGAGTGAGCAGACCTACCAGCTCTCCCGATGGACCCCTCTCATCAAGGACATCATGGAGGATGCCATTGAGGACAAACTGGATCCAAAGCAGTACCCCTACATCTCCCAACGCACTGCATCCACTCACAGCAGCGCTCCATCAAGTGCCCGGTACGGTAACTGGCATAAGAACAAGGGCCCCACAGAGATGAAGACAGGTCCCCgagtcatcatcttcatcatcggAGGCATGACCTTCAGCGAGATGCGCTGCGTCTACGAGGTCACACAAGCCAATGGAAAATGGGAAGCAATCATTGgaTCAACCAATATCTTCACCCCTACACGCCTTCTTCAAGCCCTCAAAGACATGGATAAGCAACAAGATGTTTGAGCTGAACAGCTCCCTGGCTGCAGTTGTCCCTCTCCTAACCTCCAAACTCTCCCAACTGGCATACATGAATAGTCAGGACCCAAGACATAACAAGCCCTTCTACTCTATACATAAGACTGAAGAAAACAAATGGCAGCATCTATTTCTAGCATATCCAAGTCATGTATTCAGATATCATGTTTCAATAGAATTACATAAGATCC

Function

NR:

description
syntaxin-binding protein 1-like isoform X2

GO:

id name namespace
GO:0006904 vesicle docking involved in exocytosis biological_process

KEGG:

id description
K15292 STXBP1, MUNC18-1; syntaxin-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606545.1 False 2208 mRNA 0.51 20 42372531 42415108
XM_021606548.1 True 2082 mRNA 0.51 19 42372531 42415108

Neighbor

gene id symbol gene type direction distance location
LOC110525988 LOC106584966 coding upstream 123265 42244505 ~ 42249266 (+)
paxx ci142 coding upstream 228923 42137053 ~ 42143608 (+)
htr1aa LOC106585208 coding upstream 598576 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 615328 41754679 ~ 41757203 (+)
c7a c7-2 coding upstream 643150 41723173 ~ 41729381 (+)
camsap1b LOC106585218 coding downstream 188200 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 230926 42646034 ~ 42655499 (+)
LOC118964872 NA coding downstream 364153 42779261 ~ 42780791 (+)
LOC110525999 LOC106585222 coding downstream 395206 42810314 ~ 42825158 (+)
LOC118965026 LOC106585222 coding downstream 414703 42829811 ~ 42836106 (+)
G508717 NA non-coding upstream 338 42371964 ~ 42372193 (+)
G508677 LOC106585213 non-coding upstream 40038 42319892 ~ 42332493 (+)
G508558 LOC106585210 non-coding upstream 225287 42145407 ~ 42147244 (+)
G508561 NA non-coding upstream 227298 42144051 ~ 42145233 (+)
G508562 NA non-coding upstream 244934 42125122 ~ 42127597 (+)
G509060 NA non-coding downstream 3613 42418721 ~ 42418976 (+)
G509061 NA non-coding downstream 4484 42419592 ~ 42421183 (+)
G509062 NA non-coding downstream 6234 42421342 ~ 42422146 (+)
G509064 NA non-coding downstream 13197 42428305 ~ 42428596 (+)
G509068 NA non-coding downstream 17253 42432361 ~ 42432614 (+)
G508559 dph7 other upstream 240591 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 901123 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1513009 40568637 ~ 40886427 (+)
G506285 NA other upstream 1806102 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 1825018 40544863 ~ 40547513 (+)
G509160 NA other downstream 151997 42567105 ~ 42570169 (+)
G510416 NA other downstream 1242360 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2769331 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2802619 45187119 ~ 45236944 (+)
G512912 NA other downstream 3220481 45635589 ~ 45636250 (+)

Expression


Co-expression Network