noxa1 (noxa1)


Basic Information

Item Value
gene id noxa1
gene name noxa1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42539864 ~ 42549214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606552.2
ACTGTCACAGCCCAGGTGCATTCCGTGCCTTGTTTGCTTGCTCAACCTCCCCACCCCAGGGAATGCGACTGACTTCCTTGTAGAGCAGGGTTGTGGCTCACTCACTGCTGTCGCCAAATTATGCAGCTTTCCCTACCATCCTGAGGGAGACTCAAGGTGCTCAGGTGGAATACTTTACCAGGAACCTATAACTGTCCATAGGATTCTCTTCTTGTTTATGTTTTAAGTGTTAGAGGGAGAACCTGAGGAGGATGTTGTACACAGAGTTTTTGCGGTTGTGGGATGAGGCGGTAAAGGCAGTGGATGCCAGAGACTGGCAGGGAGCCCTGTCTAAACTCAACCAGATCACTGAACCTACCTCCCGGACTCTGTTTCTGACCGCCTCTGCTCACCTCGCCTTGGGGCAGCTGGAGCCTGCCATCCAGGCTCTAGACCAGACCATAGCAAAGGATGAGCGACTTGCAGTTGGCTTCTTCCAAAGAGCTGGAGCATTCATGATGGCTAGCAGGCTGGAGGAGGCTCTGAATGACTGTACCTCGGCTCAGAAACACATGAGAGGGAACATGGTCATTGATTACAAACAGCTGGGGCTACGCTACAAGCTCTACAGTTGGCAGGTCTTGTATAATGCAGCAGCTGTCCACTCTAGACTGGACCAGTTGGACAAAGCCCGGGACATTCTGATCTCAGCCTCCCAGGAGAAAGGAAGATGGGGGCGAGGAGGGAACTTGGAGGTGGCTTTAGACATGATCTCTAGGGGAGAGGTGCTGCCTGTCCTCCTGGTGCCAGAGGGGCAGGTGTTCCGCCCCAGGAAACAGGACGTAGAacagctgggagagagagacttccTGGGCAAACCAAAGGTCATTTCCTCTATGATTCCCAATGATGACTTTGGTGGATTTGAACCTCTCAGGGTTCAGAAACCTGGATACTACGAGCCCAAGGTGGATAGAGTGGAGGATTCTCGCTACATGTGTCTGCGTACCCCTTACATATCCGGGGGCCCTGGTCAGCTGACGGTGCCAGGGGGAGCCATGGTGTTTGTCTTCAGTGATATGGAAAGAGATGGACTGGCCACGGTCATACACGATGGACAGAAAGGACTTGTCCCCATGACACTGCTAGACCCAGTGGATATCAAGAAGTCCAAAGGCAGGAGAAATAATAaaAGTATTCCCAGTGGGATCCCCCTCCCACCGGGCCTCAGGCCGCCCACTCGCCCACAGAACCAGCCCAGCCCCATAGCATCTCCTCAGGAGAGCCCAGTTAGACAGACACCACCACCATCCTATGCCTCTGCCACCTACCCACCAATCAGTTCCACACCGCTACGCAAGTACACATCCACAGTAGACAGCCCCACTGAACTGGATCCCACTTCACCCCAGGGAGCAGAGGctgggtctgtggtggtaaaGGTGCATTACAGATACACCGTGGCTCTGAGTGTCCCTTTAGGCACGCCGTACGATGACCTACAGGAGAGAATTGCAAACAAATTGGGGCAGCCAGCCTCACACTTGCGCCTCAGacACAGGCAGCATGGCTCCCAGGTGCTGAAGCCtctggatggggaggaggggctcAGGGCCCTGCTGGAGGTGGCAGAGGCAGGCAGAACCACACTGTGGTGCCAGACTGAGGACCGCCTGGACAACCGTACCATTCTCTACCAGATGGTGGCACTGTATGACTATGCAGCAGAGGGCCCAGAGGACTTGGAGTTCAGTGAGGGAGACTCTATTGACATTCTCAGTGAAGTCAACGAGGAGTGGCTGGAGGGACACTGTGCTGGTTACATTGGCATCTTCCCCAGCTGTTTTGCCTACCGGGAAGAAGAGACCCCCACaaccaggggtgcaactttcactggggatggggggggtcatgtcccccccacattctgaaatggcATTTTTGGCCCCCCGAGTTGTATCATTGCAATGTGATACAAAAAGAGGCaaaggtgtgctttaggaccatgcctccgagtggtcgggtaggctgtttggagtgttcagCCAGCTGGATTTAGGACCGCTTGGATACCACAGAGCAGGCTGACAGGCTGTCTGAAGGCAAAGCTTCTGGAAGGCTGGCTGGACCGGCACAGGAGAGTTGAGCAtagttcagtgtgtatgtgttgcGCTTTTTCACAGAGTGGTAAAAATTGGCTACTCTTTAGGCGACTGATGTAACTGACAAGGTAGCTAGTGTTTATTCGCAGTGCTGAGCTAGTATTGTAActgacatgtaacgttagctactgAGGTGAATGAATTAGCTACGCCAGCTAGTACTgtagctaccacagccaggtCAGTTCTAGCATCTAGCTATCTATCAGCTAGCGATATGAGGTGTCTATTATTACTATCTAACAGCAGTTGTTTGTATGGAAATGTTTTTTAGCCTTCGTTTTCTTCTGTTTCAACAGAAGTAAATGAACTTGTCAAGCTTTCACAACTTGATGTATCattagaaagagagagctggcaaaaggttggctaatgttagctatgaTTTTTGACTCAAtcacactagacctgaatcaaatgaTGAAACCATCAGCCAAATGATTGAAAATTGATATTCTAATGTTTTTTCAGTGCAATGTGAGTTTTTATTAGTCAGTATGGCAATGTAACtttattgatctgtcagtttctCTAGCTAATTCCCTGcttttcacactgacacagtAATAAACAGCTCTAACATTA

Function

symbol description
noxa1 Predicted to enable superoxide-generating NADPH oxidase activator activity. Predicted to be involved in superoxide anion generation. Predicted to act upstream of or within superoxide metabolic process. Predicted to be part of NADPH oxidase complex. Predicted to be active in cytosol. Orthologous to human NOXA1 (NADPH oxidase activator 1).

NR:

description
NADPH oxidase activator 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606552.2 True 2726 mRNA 0.51 16 42539864 42549214

Neighbor

gene id symbol gene type direction distance location
LOC110525992 LOC106585216 coding downstream 19369 42422990 ~ 42520495 (-)
LOC118964871 NA coding downstream 126613 42404839 ~ 42417077 (-)
LOC110525990 LOC106585213 coding downstream 179472 42302921 ~ 42360392 (-)
npdc1b LOC106585212 coding downstream 238115 42252483 ~ 42301749 (-)
LOC110525987 LOC106585210 coding downstream 298426 42146502 ~ 42241438 (-)
LOC110525994 LOC106585220 coding upstream 27315 42576529 ~ 42587286 (-)
LOC110525997 LOC106585221 coding upstream 105770 42654984 ~ 42729594 (-)
LOC110525998 LOC106585223 coding upstream 217325 42766320 ~ 42788488 (-)
zgc:101858 LOC106585225 coding upstream 442835 42992049 ~ 42997858 (-)
LOC110526002 LOC106585226 coding upstream 456356 43005570 ~ 43018519 (-)
G509296 NA non-coding downstream 93281 42446355 ~ 42446583 (-)
G509292 NA non-coding downstream 106916 42432713 ~ 42432948 (-)
G509286 NA non-coding downstream 111735 42427834 ~ 42428129 (-)
G509285 NA non-coding downstream 112902 42426744 ~ 42426962 (-)
G509284 NA non-coding downstream 113249 42426283 ~ 42426615 (-)
G509341 NA non-coding upstream 17839 42567053 ~ 42571449 (-)
G509342 NA non-coding upstream 24782 42573996 ~ 42574822 (-)
G509480 NA non-coding upstream 190776 42739990 ~ 42740374 (-)
G509483 NA non-coding upstream 196850 42746064 ~ 42746279 (-)
G509487 NA non-coding upstream 200308 42749522 ~ 42749918 (-)
G509034 LOC106585214 other downstream 136644 42372441 ~ 42403220 (-)
G508891 NA other downstream 394979 42144097 ~ 42144885 (-)
G508303 NA other downstream 718654 41820855 ~ 41821210 (-)
G507906 selenop other downstream 1077942 41421024 ~ 41461922 (-)
G509432 NA other upstream 94305 42643519 ~ 42645869 (-)
G509902 NA other upstream 527478 43076692 ~ 43077157 (-)
G509949 LOC106578716 other upstream 573332 43122546 ~ 43123092 (-)
G509952 NA other upstream 575367 43124581 ~ 43125387 (-)
G510310 NA other upstream 974500 43523714 ~ 43524108 (-)

Expression


Co-expression Network