Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964872 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42779261 ~ 42780791 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052112.1 | True | 793 | mRNA | 0.45 | 3 | 42779261 | 42780791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525996 | LOC106585219 | coding | upstream | 127533 | 42646034 ~ 42655499 (+) |
| camsap1b | LOC106585218 | coding | upstream | 133357 | 42603308 ~ 42645904 (+) |
| stxbp1b | LOC106585214 | coding | upstream | 364153 | 42372531 ~ 42415108 (+) |
| LOC110525988 | LOC106584966 | coding | upstream | 529995 | 42244505 ~ 42249266 (+) |
| paxx | ci142 | coding | upstream | 635653 | 42137053 ~ 42143608 (+) |
| LOC110525999 | LOC106585222 | coding | downstream | 29523 | 42810314 ~ 42825158 (+) |
| LOC118965026 | LOC106585222 | coding | downstream | 49020 | 42829811 ~ 42836106 (+) |
| col27a1b | LOC106585224 | coding | downstream | 72996 | 42853787 ~ 42992257 (+) |
| LOC118965079 | NA | coding | downstream | 243072 | 43023780 ~ 43024698 (+) |
| LOC110526005 | LOC106585229 | coding | downstream | 1175386 | 43937835 ~ 43981885 (+) |
| G509500 | NA | non-coding | upstream | 12913 | 42766120 ~ 42766348 (+) |
| G509272 | NA | non-coding | upstream | 22290 | 42756766 ~ 42756971 (+) |
| G509267 | NA | non-coding | upstream | 27647 | 42751408 ~ 42751614 (+) |
| G509266 | NA | non-coding | upstream | 28993 | 42750031 ~ 42750268 (+) |
| G509260 | NA | non-coding | upstream | 36048 | 42742014 ~ 42743213 (+) |
| G509697 | NA | non-coding | downstream | 189765 | 42970556 ~ 42970917 (+) |
| G509700 | NA | non-coding | downstream | 192983 | 42973774 ~ 42974022 (+) |
| G509719 | NA | non-coding | downstream | 220941 | 43001732 ~ 43002009 (+) |
| G509160 | NA | other | upstream | 209092 | 42567105 ~ 42570169 (+) |
| G508559 | dph7 | other | upstream | 647321 | 42129225 ~ 42131940 (+) |
| G507768 | LOC105030512 | other | upstream | 1307853 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 1919739 | 40568637 ~ 40886427 (+) |
| G506285 | NA | other | upstream | 2212832 | 40566067 ~ 40566429 (+) |
| G510416 | NA | other | downstream | 876677 | 43657468 ~ 43658493 (+) |
| G512192 | LOC106584908 | other | downstream | 2403648 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 2436936 | 45187119 ~ 45236944 (+) |
| G512912 | NA | other | downstream | 2854798 | 45635589 ~ 45636250 (+) |
| LOC110526042 | LOC106584891 | other | downstream | 3406209 | 46076084 ~ 46190292 (+) |
