prodhb (LOC100194675)


Basic Information

Item Value
gene id prodhb
gene name LOC100194675
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 43940790 ~ 43955257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606578.2
GGGCAGATACATGCGAAACTCATTTTAAACAGTCCACAATCGATGCTGCGCTCACCTGCTTAGTTAGTTCCGCTGAGACCAACGCAGCACCTCAAAACTCATGTCTTATGTCAAAACTGTACCAGCCCTTACTCGGGCAGGCGTGGATATAAACGTCAGAAGACTGAATACCCTTTCTAACCGAAGAGCACAGTCCACTGTCGCCTCAACTCAGGCAGACCAGGATGTCACCAACAGAGAGTCCTACTCTTCAAGGAAAAGCAGAAATGCTTCCTCCTCTCCAAAGATCTCTATTGACTTTGAGCTGACACAGGAAGCATACAAGAGTAAAGACAATTTAGAACTGCTCAGAAGTTTGGTGGTTTTCAAACTGTGCTCCTATGACCTTTTGGTTGATAAGAACAAGGAGCTGATGGATATCAGTAAGTTCGTACTGGGGAAGAAGGCATTTGAGCAGTTTATGAAGATGACATTCTATGGCCAGTTTGTGGCGGGAGAGGACCACAAGTCCATCAAGTCTCTGATTCAAAAGAACAGGGCCTTCGGAGTGGGCTCTGTCCTGGACTACAGTGTAGAGGAGGACCTCACACAAGAAGATGCAGTGACTAAAGAGATGGACTCATGTGTGTCTGCTACAGAGAAAGAAGGCATGAGCATGGACCACAGAGAAAAGCAGTATAAGGCTCACCAACAGTTTGGGGACCGTCGAGGGGGAGTGACCGGCGCCAGGACATACTTCTACTCTGATGAGGCCAAATGTGACCAACACATGGAGACCTTCCTAAAGTGTATCAAAGCATCTGGTGGGAGCTCAGTGGATGGCTTCTCTGCCATCAAGATGACTGCACTGGGACGACCTCAGTTCCTGCTCAAGTTCTCGGAGGTGCTGGTGAAATGGAAGCGTTTCTTCAGCTTCCTGGCGGCACAGCAGGGGAGAGATGGCATGGAGGCTCTGGAGCAGAGGCTAGAGCTGCAGCCACTACAGGAGTTTATGACCACGCTGGGGGCCACAGGTGACTTCCATGGCTGGTTCACTGGAGAGAAACAAGGATCAGGAACCATTGACAGGCTGGACTGGAACAGCCTGATCGACGACAGAATAAAGATATCAGATCTGCTGGTTGTCCCAAATTTAGAGACTGGTCAGCTGGAGCCCCTGCTCAATAAgttcacagaggaggaggagaaacagatgaAGAGGATGCTCCAGAGGCTGGACGTACTTGCCAATCATGCAGAGGAGCACAGTGTTCGTCTGATGGTGGATGCAGAGCAGACCTACTTCCAGCCCGCCATCAGCACACTGACTGTGGAGATGCAGAGGATCTACAATAGAGGGAAACCTGTCATCTTCAACACCTACCAGTGCTACCTCAAGGAGGCCTATGATATCGTGACCATGGATGTTGAGTTGTCTAGGCGTGAGGGATGGTTTTTTGGGGCCAAGCTGGTGCGTGGGGCTTATATGTACCAGGAGAGGAGCAGAGCGGAGGAGATCGGATACGAGGACCCCATCAACCCTGACTATGAGACCACTAACATGATGTACCACAAGTGTCTAGACTACATCCTCGATGAGATTGTACTGAACAGAAATGCCAATGTCATGGTTGCTTCTCACAATGAGGACACAGTGAAGCACACCCTCAGGAGGATGAATGAGTTGGGCCTGACTCCCACGGAGAACAAGGTGTACTTTGGACAGCTGCTGGGCATGTGCGACCAAATCAGCTTCCCATTGggccagGCAGGTTTCCCGGTCTATAAATATGTTCCATACGGGCCGGTGAATGAGGTGATACCGTACTTATCCCGTCGTGCCCAGGAGAACAGGGGCTTCATGAAGGGTtcccagagggagagggagatgctgTGGAAGGAGCTAAAACGCAGGCTGGCCTCGGGACAAGTCTTCTACAGACCTCAGCCTGAACCGGGTCTATGaaatcacagctagctagctgtctgtctgtgctgtgtcatgacgttggcctctttgagTATATCaaccccatcccctctccctgccaccccccttgcctccttcaactaggctgctgtggtcagaggtcgtaaattcctgagaagacctcaTGGAGAGTAGTCTCTCATTATAGAGAGTAGTCTTTCAtggagacaaaggaaatccttcctcctcacagaacttgaggtacgaacaaatttcatgttctggagaaagtgtaaaagatcggtgaagaatccagctacgaactggtccgtttgtcacaa
>XM_036980157.1
GGGGCAGATACATGCGAAACTCATTTTAAACAGTCCACAATCGATGCTGCGCTCACCTGCTTAGTTAGTTCCGCTGAGACCAACGCAGCACCTCAAAACTCATGTCTTATGTCAAAACTGTACCAGCCCTTACTCGGGCAGGCGTGGATATAAACGTCAGAAGACTGAATACCCTTTCTAACCGAAGAGCACAGTCCACTGTCGCCTCAACTCAGGCAGACCAGGATGTCACCAACAGAGAGTCCTACTCTTCAAGGAAAAGCAGAAATGCTTCCTCCTCTCCAAAGATCTCTATTGACTTTGAGCTGACACAGGAAGCATACAAGAGTAAAGACAATTTAGAACTGCTCAGAAGTTTGGTGGTTTTCAAACTGTGCTCCTATGACCTTTTGGTTGATAAGAACAAGGAGCTGATGGATATCAGTAAGTTCGTACTGGGGAAGAAGGCATTTGAGCAGTTTATGAAGATGACATTCTATGGCCAGTTTGTGGCGGGAGAGGACCACAAGTCCATCAAGTCTCTGATTCAAAAGAACAGGGCCTTCGGAGTGGGCTCTGTCCTGGACTACAGTGTAGAGGAGGACCTCACACAAGAAGATGCAGTGACTAAAGAGATGGACTCATGTGTGTCTGCTACAGAGAAAGAAGGCATGAGCATGGACCACAGAGAAAAGCAGTATAAGGCTCACCAACAGTTTGGGGACCGTCGAGGGGGAGTGACCGGCGCCAGGACATACTTCTACTCTGATGAGGCCAAATGTGACCAACACATGGAGACCTTCCTAAAGTGTATCAAAGCATCTGGTGGGAGCTCAGTGGATGGCTTCTCTGCCATCAAGATGACTGCACTGGGACGACCTCAGTTCCTGCTCAAGTTCTCGGAGGTGCTGGTGAAATGGAAGCGTTTCTTCAGCTTCCTGGCGGCACAGCAGGGGAGAGATGGCATGGAGGCTCTGGAGCAGAGGCTAGAGCTGCAGCCACTACAGGAGTTTATGACCACGCTGGGGGCCACAGGTGACTTCCATGGCTGGTTCACTGGAGAGAAACAAGGATCAGGAACCATTGACAGGCTGGACTGGAACAGCCTGATCGACGACAGAATAAAGATATCAGATCTGCTGGTTGTCCCAAATTTAGAGACTGGTCAGCTGGAGCCCCTGCTCAATAAgttcacagaggaggaggagaaacagatgaAGAGGATGCTCCAGAGGCTGGACGTACTTGCCAATCATGCAGAGGAGCACAGTGTTCGTCTGATGGTGGATGCAGAGCAGACCTACTTCCAGCCCGCCATCAGCACACTGACTGTGGAGATGCAGAGGATCTACAATAGAGGGAAACCTGTCATCTTCAACACCTACCAGTGCTACCTCAAGGAGGCCTATGATATCGTGACCATGGATGTTGAGTTGTCTAGGCGTGAGGGATGGTTTTTTGGGGCCAAGCTGGTGCGTGGGGCTTATATGTACCAGGAGAGGAGCAGAGCGGAGGAGATCGGATACGAGGACCCCATCAACCCTGACTATGAGACCACTAACATGATGTACCACAAGATGAATGAGTTGGGCCTGACTCCCACGGAGAACAAGGTGTACTTTGGACAGCTGCTGGGCATGTGCGACCAAATCAGCTTCCCATTGggccagGCAGGTTTCCCGGTCTATAAATATGTTCCATACGGGCCGGTGAATGAGGTGATACCGTACTTATCCCGTCGTGCCCAGGAGAACAGGGGCTTCATGAAGGGTtcccagagggagagggagatgctgTGGAAGGAGCTAAAACGCAGGCTGGCCTCGGGACAAGTCTTCTACAGACCTCAGCCTGAACCGGGTCTATGaaatcacagctagctagctgtctgtctgtgctgtgtcatgacgttggcctctttgagTATATCaaccccatcccctctccctgccaccccccttgcctccttcaactaggctgctgtggtcagaggtcgtaaattcctgagaagacctcaTGGAGAGTAGTCTCTCATTATAGAGAGTAGTCTTTCAtggagacaaaggaaatccttcctcctcacagaacttgaggtacgaacaaatttcatgttctggagaaagtgtaaaagatcggtgaagaatccagctacgaactggtccgtttgtcacaa
>TU579749
CTTAGAAGaggcctacataaccaacccataaagtaaaatgcaacatccatttatggccagctatgtaaactctcAAATGTATTTAGTCTGCAATAAATGTCATTCAATTGGTCATattcatttttgtcttcttctaatgcctcttaagcgGAAAGCAAGCTAAAAGTAACTGAACGTAAACAGATTGTGTTACTGAGTTTGTGTAATCCAAAAGTTATGATTCTGATTACAATTTTTGGAAGGTAACTAGTAACCGTCACGGATtatatttagaaagtaacctacccaacgcTGAGAACACAGTTGCTGTTCTTTAGGGTTTATAATGACTTGTGTATAGGTTTGATCCATTGAGATAACAATGTCGTACTATATATACGGTCAAAAATGCCTATTTGTCCATACAGGAGTTTATGACCACGCTGGGGGCCACAGGTGACTTCCATGGCTGGTTCACTGGAGAGAAACAAGGATCAGGAACCATTGACAGGCTGGACTGGAACAGCCTGATCGACGACAGAATAAAGATATCAGATCTGCTGGTTGTCCCAAATTTAGAGACTGGTCAGCTGGAGCCCCTGCTCAATAAgttcacagaggaggaggagaaacagatgaAGAGGATGCTCCAGAGGCTGGACGTACTTGCCAATCATGCAGAGGAGCACAGTGTTCGTCTGATGGTGGATGCAGAGCAGACCTACTTCCAGCCCGCCATCAGCACACTGACTGTGGAGATGCAGAGGATCTACAATAGAGGGAAACCTGTCATCTTCAACACCTACCAGTGCTACCTCAAGGAGGCCTATGATATCGTGACCATGGATGTTGAGTTGTCTAGGCGTGAGGGATGGTTTTTTGGGGCCAAGCTGGTGCGTGGGGCTTATATGTACCAGGAGAGGAGCAGAGCGGAGGAGATCGGATACGAGGACCCCATCAACCCTGACTATGAGACCACTAACATGATGTACCACAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606578.2 False 2250 mRNA 0.50 14 43940790 43955256
XM_036980157.1 False 2152 mRNA 0.50 13 43940790 43955257
TU579749 True 977 TUCP 0.45 5 43946338 43948389

Neighbor

gene id symbol gene type direction distance location
LOC110526003 LOC106585228 coding downstream 127380 43689304 ~ 43813410 (-)
LOC110526002 LOC106585226 coding downstream 922271 43005570 ~ 43018519 (-)
zgc:101858 LOC106585225 coding downstream 942932 42992049 ~ 42997858 (-)
LOC110525998 LOC106585223 coding downstream 1152302 42766320 ~ 42788488 (-)
LOC110525997 LOC106585221 coding downstream 1211196 42654984 ~ 42729594 (-)
LOC110526006 LOC106584969 coding upstream 89789 44045046 ~ 44099131 (-)
nf2a nf2 coding upstream 255593 44209338 ~ 44272386 (-)
fbxw8 fbxw8 coding upstream 354637 44309894 ~ 44345449 (-)
LOC110526015 gatsl3 coding upstream 410599 44365856 ~ 44394019 (-)
LOC110526901 NA coding upstream 447554 44402811 ~ 44409947 (-)
G510322 NA non-coding downstream 406601 43533913 ~ 43534189 (-)
G510304 NA non-coding downstream 421327 43519206 ~ 43519463 (-)
G510221 NA non-coding downstream 479867 43460694 ~ 43460923 (-)
G510214 NA non-coding downstream 483306 43457032 ~ 43457484 (-)
G510162 NA non-coding downstream 527817 43412758 ~ 43412973 (-)
G510947 NA non-coding upstream 43511 43998768 ~ 43999038 (-)
G510951 NA non-coding upstream 46636 44001893 ~ 44002194 (-)
G511181 NA non-coding upstream 226001 44181258 ~ 44181689 (-)
G511189 NA non-coding upstream 247879 44203136 ~ 44203395 (-)
G511342 NA non-coding upstream 326718 44281975 ~ 44282194 (-)
G510310 NA other downstream 416682 43523714 ~ 43524108 (-)
G509952 NA other downstream 815403 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 817698 43122546 ~ 43123092 (-)
G509902 NA other downstream 863633 43076692 ~ 43077157 (-)
G509432 NA other downstream 1294921 42643519 ~ 42645869 (-)
znrf3 LOC106584905 other upstream 1319381 45270568 ~ 45384850 (-)
apba1a apba1 other upstream 2404631 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 2415433 46367701 ~ 46430607 (-)
G514434 NA other upstream 2955401 46910658 ~ 46910950 (-)

Expression


Co-expression Network