Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526005 |
| gene name | LOC106585229 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 43937835 ~ 43981885 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036980158.1 | False | 6038 | mRNA | 0.46 | 11 | 43956177 | 43981885 |
| XM_036980159.1 | False | 6035 | mRNA | 0.46 | 11 | 43956177 | 43981885 |
| XM_036980160.1 | False | 6011 | mRNA | 0.46 | 11 | 43956177 | 43981885 |
| XM_036980161.1 | False | 6008 | mRNA | 0.46 | 11 | 43956177 | 43981885 |
| XM_036980162.1 | False | 5648 | mRNA | 0.47 | 11 | 43957042 | 43981885 |
| TU579451 | True | 1329 | lncRNA | 0.36 | 2 | 43937835 | 43981829 |
43,930,000
43,940,000
43,950,000
43,960,000
43,970,000
43,980,000
43,990,000
44,000,000
44,010,000
44,020,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965079 | NA | coding | upstream | 931479 | 43023780 ~ 43024698 (+) |
| col27a1b | LOC106585224 | coding | upstream | 963946 | 42853787 ~ 42992257 (+) |
| LOC118965026 | LOC106585222 | coding | upstream | 1120071 | 42829811 ~ 42836106 (+) |
| LOC110525999 | LOC106585222 | coding | upstream | 1131019 | 42810314 ~ 42825158 (+) |
| LOC118964872 | NA | coding | upstream | 1175386 | 42779261 ~ 42780791 (+) |
| LOC118964874 | NA | coding | downstream | 10948 | 43992833 ~ 43995155 (+) |
| LOC110526008 | NA | coding | downstream | 277211 | 44259096 ~ 44260124 (+) |
| LOC110526009 | LOC106585233 | coding | downstream | 302967 | 44284852 ~ 44295238 (+) |
| LOC110526012 | LOC106585234 | coding | downstream | 313729 | 44295614 ~ 44309360 (+) |
| LOC110526014 | NA | coding | downstream | 355841 | 44337537 ~ 44339789 (+) |
| G510324 | NA | non-coding | upstream | 421026 | 43534841 ~ 43535151 (+) |
| G510311 | NA | non-coding | upstream | 431328 | 43524623 ~ 43524849 (+) |
| G510308 | NA | non-coding | upstream | 434054 | 43521648 ~ 43522123 (+) |
| G510268 | NA | non-coding | upstream | 463825 | 43492149 ~ 43492352 (+) |
| G510152 | NA | non-coding | upstream | 549381 | 43406446 ~ 43406796 (+) |
| G510932 | NA | non-coding | downstream | 8067 | 43989952 ~ 43990487 (+) |
| G510946 | NA | non-coding | downstream | 16898 | 43998783 ~ 43998991 (+) |
| G510950 | NA | non-coding | downstream | 20008 | 44001893 ~ 44002194 (+) |
| G510986 | NA | non-coding | downstream | 47805 | 44029690 ~ 44029918 (+) |
| G510416 | NA | other | upstream | 297684 | 43657468 ~ 43658493 (+) |
| G509160 | NA | other | upstream | 1386008 | 42567105 ~ 42570169 (+) |
| G508559 | dph7 | other | upstream | 1824237 | 42129225 ~ 42131940 (+) |
| G507768 | LOC105030512 | other | upstream | 2484769 | 41469551 ~ 41471408 (+) |
| fbxl17 | fbxl17 | other | upstream | 3096655 | 40568637 ~ 40886427 (+) |
| G512192 | LOC106584908 | other | downstream | 1202554 | 45184439 ~ 45185869 (+) |
| LOC110526028 | ccdc60 | other | downstream | 1235842 | 45187119 ~ 45236944 (+) |
| G512912 | NA | other | downstream | 1653704 | 45635589 ~ 45636250 (+) |
| LOC110526042 | LOC106584891 | other | downstream | 2205115 | 46076084 ~ 46190292 (+) |
| G513501 | NA | other | downstream | 2378071 | 46359956 ~ 46360585 (+) |
