Gene
RNA
| Item | Value |
|---|---|
| gene id | nf2a |
| gene name | nf2 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 44209338 ~ 44272386 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| nf2 | Predicted to enable actin binding activity. Involved in several processes, including Schwann cell proliferation; positive regulation of stress fiber assembly; and regulation of signal transduction. Located in several cellular components, including early endosome; nucleolus; and perinuclear region of cytoplasm. Implicated in familial meningioma; neurilemmomatosis; and neurofibromatosis 2. Biomarker of acoustic neuroma. |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021606584.2 | False | 3427 | mRNA | 0.48 | 17 | 44210850 | 44271697 |
| XM_021606583.2 | False | 3994 | mRNA | 0.46 | 16 | 44210850 | 44272385 |
| XM_036980165.1 | False | 3283 | mRNA | 0.45 | 13 | 44228585 | 44272386 |
| TU580173 | False | 1328 | TUCP | 0.44 | 1 | 44209338 | 44210665 |
| TU580171 | False | 2359 | TUCP | 0.41 | 1 | 44209465 | 44211823 |
| TU580172 | True | 1201 | TUCP | 0.45 | 1 | 44209465 | 44210665 |
44,170,000
44,180,000
44,190,000
44,200,000
44,210,000
44,220,000
44,230,000
44,240,000
44,250,000
44,260,000
44,270,000
44,280,000
44,290,000
44,300,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526006 | LOC106584969 | coding | downstream | 111719 | 44045046 ~ 44099131 (-) |
| prodhb | LOC100194675 | coding | downstream | 255593 | 43940790 ~ 43955257 (-) |
| LOC110526003 | LOC106585228 | coding | downstream | 397440 | 43689304 ~ 43813410 (-) |
| LOC110526002 | LOC106585226 | coding | downstream | 1192331 | 43005570 ~ 43018519 (-) |
| zgc:101858 | LOC106585225 | coding | downstream | 1212992 | 42992049 ~ 42997858 (-) |
| fbxw8 | fbxw8 | coding | upstream | 37508 | 44309894 ~ 44345449 (-) |
| LOC110526015 | gatsl3 | coding | upstream | 93470 | 44365856 ~ 44394019 (-) |
| LOC110526901 | NA | coding | upstream | 130425 | 44402811 ~ 44409947 (-) |
| lrrc74b | lrrc74b | coding | upstream | 139310 | 44411696 ~ 44435774 (-) |
| nos1 | LOC106585241 | coding | upstream | 163906 | 44436292 ~ 44501179 (-) |
| G511189 | NA | non-coding | downstream | 7455 | 44203136 ~ 44203395 (-) |
| G511181 | NA | non-coding | downstream | 29161 | 44181258 ~ 44181689 (-) |
| G510951 | NA | non-coding | downstream | 208656 | 44001893 ~ 44002194 (-) |
| G510947 | NA | non-coding | downstream | 211812 | 43998768 ~ 43999038 (-) |
| G510322 | NA | non-coding | downstream | 676661 | 43533913 ~ 43534189 (-) |
| G511342 | NA | non-coding | upstream | 9589 | 44281975 ~ 44282194 (-) |
| G511345 | NA | non-coding | upstream | 11888 | 44284274 ~ 44284580 (-) |
| G511375 | NA | non-coding | upstream | 77271 | 44349657 ~ 44350163 (-) |
| G511376 | NA | non-coding | upstream | 78041 | 44350427 ~ 44351990 (-) |
| G510310 | NA | other | downstream | 686742 | 43523714 ~ 43524108 (-) |
| G509952 | NA | other | downstream | 1085463 | 43124581 ~ 43125387 (-) |
| G509949 | LOC106578716 | other | downstream | 1087758 | 43122546 ~ 43123092 (-) |
| G509902 | NA | other | downstream | 1133693 | 43076692 ~ 43077157 (-) |
| znrf3 | LOC106584905 | other | upstream | 1002252 | 45270568 ~ 45384850 (-) |
| apba1a | apba1 | other | upstream | 2087502 | 46263121 ~ 46360886 (-) |
| LOC110526044 | LOC107699739 | other | upstream | 2098304 | 46367701 ~ 46430607 (-) |
| G514434 | NA | other | upstream | 2638272 | 46910658 ~ 46910950 (-) |
| G514777 | NA | other | upstream | 2743776 | 47016162 ~ 47016496 (-) |
