LOC110526009 (LOC106585233)


Basic Information

Item Value
gene id LOC110526009
gene name LOC106585233
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44284852 ~ 44295238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606586.2
CGGAGTAAACAGTAAAGATGGCGACAtctggagcaggaggagaggggtactCCGGCCTGAACGGGATCGTTTCCGAGACAGAACACAAAATAATGACAGACCTACCGGCCGAGTTACTCGAGTACATCTTATGCTTCCCTGTCCTCAAGCATGTCGACATTTGCAACGTTTCCTGCAGCTGCAAGCGGTTACACGACGTTTGCCACGGCAGGGGGAAGGTCTGGGGACACCAGTACAAACTCAGATGGCCAAGATTGCAGAAGCATTACCGCCAGAATGAGTGTTGCGATTGGCTGAAAGAATACAGAACGCGACACACTGTTGGTCTACAAATACGACGAACAGTTGTATCCATCTCAAAGAGATTTTTCACGGAAGTTCCTTGCGTTGGCCAGGTGCTGGGGGACAGCTTTGCTGAGATTGAGTCCCTCGGGGCCCCTGAGCACTTCTGTGAAGACGAGCTGCTTTCCATACTGAACTCAGATAGGAGGAAAAGCCTGACACTGAAGTACTATGCAAAGAAAATCCTTTATTTCCTTCGCCAGCAGAACATTCTGAGGAGTTTAAAGATGTTTCTGGAGCAGCCTGCAGAGCAGCAGTCAGCACTAGAGGGAGCTGTGCTGGTGGACCAGTATTGTAACCCCCTGGCAGATGTGTCGTTGGACGGTATATCCTCCCAGctggaggagatcactgacaaGGTCAAGAAGATGCTGCGGATGAAGAATTCCTCTCATCCAAGCCTGAGGGTCACACAAGGTGACTGCTTTGCTGTGGAGGACTTTGAGCTCGAGAGGCAGGTGGTGGTTGCCCTCAATGCTGTTTTGTACGAGCAGCTTCAGTACAAGGGCAACGAGTGTGATTACTACAATCCTCTCAACTCTTACATACACCAGGTGTTGCTCCGCCGGACAGGCATTCCCATCAGCCTGTCTGTCCTGTACATGACCCTGGCCAGGAAACTGGGGGTTCAGCTAGAGCCCGTAAACTTCCCCAATCACTTCCTGCTTCGCTGGTGCCAGCATCAAAGAGGGAGTGGGGACATCTATGACTTTGTGTACATTGACGCTTTCGGTAAAGGCAAGCAGCTGACGGCTAAGGAGTGTGAGTACCTCATTGGTCACCAGGTGACTGCAGACTACTACAGTGCCATCAGTACCACAGAAGTGCTGCTAAGGATGGTGGGGAATCTGCTCAACATCGGCAAGCGAGGGGAAGGCAATGAAAAATCCTACCAGCTGCTGAGAGACTCTCTGGATCTCTACCTCACCATCAACCCAGACAACGTTCAATACCTTCTACTACAGGCCAGACTCTACTTCCACCTGGGCATCTGGCCTGAGAAGgTCCTAGACATCCTGCAGCACATCCAGGCGTTGGACCCGTCCCAGCATGGGGCGGTAGGCTATCTGGTGCAGCACACCCTGGAGCACATCCAGCACAAGAAGCACCCGGTGGAGCCAGAGGTGAAGAGACGCAGCGCCCCCGAGCACGTAGAAGTGCAGTACAGCGTAGGCCTGATCATGAAACACAAGAGGTCTGGCTACAACTGTGTGATCTATGGCTGGGACCCCAAGTGCACCATGAGCCAGGAGTGGATCACCACAATGAGGGTCCACCAGCTGTCCAGCGGGGCCAACCAGCCATTCTACAACGTCTTAGTGCAGGACGGTACCTGTCGATACGCTGCCCAGGAAAACCTGGAGCCTCATTCCGCTCCTCTGGAGATCGCCCATCCGGAGGTGGGCCGCTATTTCTCAGAGTTCCATGACAGCCACTACGTTGCCAACGAGGAGTTGCAGACACGCTACCCAGAGGACATGGCAGAGACCCTGGGCACCGTACGGGACCTCTACCACAGACTGACGCCCTCCTCAGGGCAGGCCTCAGGGCAACAGGAGAGCCCTAAAGGCACCGGGGGCTCTTCCCAGGACCAGAAGAGCCAGGAGAACCAGGAAGCTATGCCCATGTAGCTTAGCGTCCACTACTTCTCTGCCCTTTCCAAAACAACCCCTAGCCCGTACCACCTAGGCACCtgtgtagatctgaaaggattggatGGGTATAAACAATGTCAGAATTACAACTAGCCTATCATAGGGCATAGTGGAGCTACTACTAGACCCTTCAGCAGGGATAGATTCGGCCGCGAGCCgatttcttttctttcttttttttcttgagGAGCTGGAACGTagttacaaatcatttgtaaactgcaaattgaccacaagaagcccaacagatataatatttgactaaaacataataatttcaaaccctttcttacatttgtatacgatcataTGTTTGGGAATACTTGAACTTATTTCCCAAATTAATATAACTTGGAggtgatttcctggtgtttttacagttttgtatgtccaacaatgaaaatgcaaaaaaagatacataaatatatatttggTTGCTCAGAAGGTTTTaattggggggccaaataaagcCACCTGCAGGCCAAATTCGGCCCGtgggccaccagttggggaaccctgggctaggggttgtttctagATTTTAAGccccctctcttccccatccAATTCCTTTACTTGACAACGTCCTGTCCAGAACCATCAGGGCCCCTGTTCACAAACAACTCAGAGTAGATAGTGCTGATCTCGGATCAGGTCATAGCTGTCAGTATAATCGTATTCACTATGATCTAAaatgctaaactgatcctagatcatcacTCCTAGTCTAAAGTGATTTAGGAATGAGTGCCCTGGAATGCTTCAGTACCTGGATCATGTGCTGTACCACCGATTGCCAACCAACGCCAGTAAAAGCCAAAACCCCTTTTCTCTCCACCTTCAAGAAGATTTACCAAGCTTGTCTCCTTtactctcgctctccatctcaaTCTACTTTCTTCACCTTCCGTCAAGTTCTTCCCAGACCTGACCCCTAGGCCATCACCCTCTCTTTTACCTCCACATGAAACACTATCAAAATGAACGTTACAGTATGAAGCAATGTGAAAATTAACATTTCTGTTACAATATCTCTTTCCATCTTACATTATAATAATGATTCATGCACTTACGAAAGGATGACTTTCGAATTTCTAGAACATGTTATACTTTTTTTTTCTGTATATTTCCAAGTAAaacattgtaggacttttaagGGCTCACAGATGTGTTGAGCTGTGTAAAAAGAAAACCACTAGGACTACAATGACTTGAAACAGTAGAGTGGTGAGACTGGATGAAATTAAAGGAACAAATAAAATGTTTCAAGGTTTA
>XM_036980166.1
CGGAGTAAACAGTAAAGATGGCGACAtctggagcaggaggagaggggtactCCGGCCTGAACGGGATCGTTTCCGAGACAGAACACAAAATAATGACAGACCTACCGGCCGAGTTACTCGAGTACATCTTATGCTTCCCTGTCCTCAAGCATGTCGACATTTGCAACGTTTCCTGCAGCTGCAAGCGGTTACACGACGTTTGCCACGGCAGGGGGAAGGTCTGGGGACACCAGTACAAACTCAGATGGCCAAGATTGCAGAAGCATTACCGCCAGAATGAGTGTTGCGATTGGCTGAAAGAATACAGAACGCGACACACTGTTGGTCTACAAATACGACGAACAGTTGTATCCATCTCAAAGAGATTTTTCACGGAAGTTGTGCTGGGGGACAGCTTTGCTGAGATTGAGTCCCTCGGGGCCCCTGAGCACTTCTGTGAAGACGAGCTGCTTTCCATACTGAACTCAGATAGGAGGAAAAGCCTGACACTGAAGTACTATGCAAAGAAAATCCTTTATTTCCTTCGCCAGCAGAACATTCTGAGGAGTTTAAAGATGTTTCTGGAGCAGCCTGCAGAGCAGCAGTCAGCACTAGAGGGAGCTGTGCTGGTGGACCAGTATTGTAACCCCCTGGCAGATGTGTCGTTGGACGGTATATCCTCCCAGctggaggagatcactgacaaGGTCAAGAAGATGCTGCGGATGAAGAATTCCTCTCATCCAAGCCTGAGGGTCACACAAGGTGACTGCTTTGCTGTGGAGGACTTTGAGCTCGAGAGGCAGGTGGTGGTTGCCCTCAATGCTGTTTTGTACGAGCAGCTTCAGTACAAGGGCAACGAGTGTGATTACTACAATCCTCTCAACTCTTACATACACCAGGTGTTGCTCCGCCGGACAGGCATTCCCATCAGCCTGTCTGTCCTGTACATGACCCTGGCCAGGAAACTGGGGGTTCAGCTAGAGCCCGTAAACTTCCCCAATCACTTCCTGCTTCGCTGGTGCCAGCATCAAAGAGGGAGTGGGGACATCTATGACTTTGTGTACATTGACGCTTTCGGTAAAGGCAAGCAGCTGACGGCTAAGGAGTGTGAGTACCTCATTGGTCACCAGGTGACTGCAGACTACTACAGTGCCATCAGTACCACAGAAGTGCTGCTAAGGATGGTGGGGAATCTGCTCAACATCGGCAAGCGAGGGGAAGGCAATGAAAAATCCTACCAGCTGCTGAGAGACTCTCTGGATCTCTACCTCACCATCAACCCAGACAACGTTCAATACCTTCTACTACAGGCCAGACTCTACTTCCACCTGGGCATCTGGCCTGAGAAGgTCCTAGACATCCTGCAGCACATCCAGGCGTTGGACCCGTCCCAGCATGGGGCGGTAGGCTATCTGGTGCAGCACACCCTGGAGCACATCCAGCACAAGAAGCACCCGGTGGAGCCAGAGGTGAAGAGACGCAGCGCCCCCGAGCACGTAGAAGTGCAGTACAGCGTAGGCCTGATCATGAAACACAAGAGGTCTGGCTACAACTGTGTGATCTATGGCTGGGACCCCAAGTGCACCATGAGCCAGGAGTGGATCACCACAATGAGGGTCCACCAGCTGTCCAGCGGGGCCAACCAGCCATTCTACAACGTCTTAGTGCAGGACGGTACCTGTCGATACGCTGCCCAGGAAAACCTGGAGCCTCATTCCGCTCCTCTGGAGATCGCCCATCCGGAGGTGGGCCGCTATTTCTCAGAGTTCCATGACAGCCACTACGTTGCCAACGAGGAGTTGCAGACACGCTACCCAGAGGACATGGCAGAGACCCTGGGCACCGTACGGGACCTCTACCACAGACTGACGCCCTCCTCAGGGCAGGCCTCAGGGCAACAGGAGAGCCCTAAAGGCACCGGGGGCTCTTCCCAGGACCAGAAGAGCCAGGAGAACCAGGAAGCTATGCCCATGTAGCTTAGCGTCCACTACTTCTCTGCCCTTTCCAAAACAACCCCTAGCCCGTACCACCTAGGCACCtgtgtagatctgaaaggattggatGGGTATAAACAATGTCAGAATTACAACTAGCCTATCATAGGGCATAGTGGAGCTACTACTAGACCCTTCAGCAGGGATAGATTCGGCCGCGAGCCgatttcttttctttcttttttttcttgagGAGCTGGAACGTagttacaaatcatttgtaaactgcaaattgaccacaagaagcccaacagatataatatttgactaaaacataataatttcaaaccctttcttacatttgtatacgatcataTGTTTGGGAATACTTGAACTTATTTCCCAAATTAATATAACTTGGAggtgatttcctggtgtttttacagttttgtatgtccaacaatgaaaatgcaaaaaaagatacataaatatatatttggTTGCTCAGAAGGTTTTaattggggggccaaataaagcCACCTGCAGGCCAAATTCGGCCCGtgggccaccagttggggaaccctgggctaggggttgtttctagATTTTAAGccccctctcttccccatccAATTCCTTTACTTGACAACGTCCTGTCCAGAACCATCAGGGCCCCTGTTCACAAACAACTCAGAGTAGATAGTGCTGATCTCGGATCAGGTCATAGCTGTCAGTATAATCGTATTCACTATGATCTAAaatgctaaactgatcctagatcatcacTCCTAGTCTAAAGTGATTTAGGAATGAGTGCCCTGGAATGCTTCAGTACCTGGATCATGTGCTGTACCACCGATTGCCAACCAACGCCAGTAAAAGCCAAAACCCCTTTTCTCTCCACCTTCAAGAAGATTTACCAAGCTTGTCTCCTTtactctcgctctccatctcaaTCTACTTTCTTCACCTTCCGTCAAGTTCTTCCCAGACCTGACCCCTAGGCCATCACCCTCTCTTTTACCTCCACATGAAACACTATCAAAATGAACGTTACAGTATGAAGCAATGTGAAAATTAACATTTCTGTTACAATATCTCTTTCCATCTTACATTATAATAATGATTCATGCACTTACGAAAGGATGACTTTCGAATTTCTAGAACATGTTATACTTTTTTTTTCTGTATATTTCCAAGTAAaacattgtaggacttttaagGGCTCACAGATGTGTTGAGCTGTGTAAAAAGAAAACCACTAGGACTACAATGACTTGAAACAGTAGAGTGGTGAGACTGGATGAAATTAAAGGAACAAATAAAATGTTTCAAGGTTTA

Function

NR:

description
F-box only protein 21 isoform X3

GO: NA

KEGG:

id description
K10301 FBXO21; F-box protein 21

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606586.2 False 3272 mRNA 0.48 12 44284852 44295238
XM_036980166.1 True 3257 mRNA 0.48 12 44284852 44295238

Neighbor

gene id symbol gene type direction distance location
LOC110526008 NA coding upstream 24728 44259096 ~ 44260124 (+)
LOC118964874 NA coding upstream 289697 43992833 ~ 43995155 (+)
LOC110526005 LOC106585229 coding upstream 302967 43937835 ~ 43981885 (+)
LOC118965079 NA coding upstream 1260154 43023780 ~ 43024698 (+)
col27a1b LOC106585224 coding upstream 1292621 42853787 ~ 42992257 (+)
LOC110526012 LOC106585234 coding downstream 376 44295614 ~ 44309360 (+)
LOC110526014 NA coding downstream 42488 44337537 ~ 44339789 (+)
LOC110526013 LOC106585235 coding downstream 50244 44345482 ~ 44348787 (+)
LOC110526020 NA coding downstream 434829 44730067 ~ 44740687 (+)
LOC110526024 suds3 coding downstream 578147 44873385 ~ 44895982 (+)
G511256 NA non-coding upstream 257 44284251 ~ 44284595 (+)
G511249 NA non-coding upstream 6545 44277848 ~ 44278307 (+)
G511247 NA non-coding upstream 10036 44274417 ~ 44274816 (+)
G511197 NA non-coding upstream 72934 44209773 ~ 44211918 (+)
G511194 NA non-coding upstream 79264 44205360 ~ 44205588 (+)
G511281 NA non-coding downstream 44682 44339920 ~ 44342925 (+)
G511284 NA non-coding downstream 53887 44349125 ~ 44350035 (+)
G511283 NA non-coding downstream 55010 44350248 ~ 44351084 (+)
G511285 NA non-coding downstream 57312 44352550 ~ 44352753 (+)
G510416 NA other upstream 626359 43657468 ~ 43658493 (+)
G509160 NA other upstream 1714683 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2152912 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2813444 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3425330 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 889201 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 922489 45187119 ~ 45236944 (+)
G512912 NA other downstream 1340351 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1891762 46076084 ~ 46190292 (+)
G513501 NA other downstream 2064718 46359956 ~ 46360585 (+)

Expression


Co-expression Network