LOC110526012 (LOC106585234)


Basic Information

Item Value
gene id LOC110526012
gene name LOC106585234
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44295614 ~ 44309360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606590.2
AGTGCATGTGTTACTAACTTCTTTATGACAGCAGAGGGAATCGCTAGTTGGTAGGGAGCACAGTACAGTAGGAGCGCGAAAAGTCCACATAACTCGTAGATTCACCTGCGGCAAAGATCGTAGTACACTCTTGTAATAATTTCAATGCGCAAGTGTCGCTCTTTTGGGGAAAAAACGCAATGGGAGCCTCGCAGTCTGCGCGCACTGAACATGAGTTCCAAGATCTGGCTGATCGAACTGGATTTTCCCTGGAGCAGATTGGCAACCTCAACAAGAGATTCAGACAGCTGAGCAAGAATGAGGAGACACTAAGTCGACAGGATTTGGCGAGCATCTCTGCTCTAGATAACAATCCACTCCGGGCTCAAATTATTAATGCCTTCTTTGACAAAAGAAACCTCCGTCAGAATGAGGCGGGTACGGTCCAGGTGATTGGCTTTGAGGAGTTCCTTATGGTCATGTCTCACTTTCGTCCGGCAGCTATGCAcatcacagaggaggagagggagaaactgAGGCGGGAAAAACTACGCTTTGTGTTCAACATGCATGACACAGACAGTGACGGCACCATCACTCTGGAGGAGTACAGACGGGCGGTAGAAGAGCTCCTGTCCAAGGCTGGCACAATCGGGCAGGAGACCGCAAAGGCCATTGCAGACGCCGCCATGCTGGAAGTTGCGAGCACCACAAGGGGCAAAATGGAACCTGATGAATTCTATGAAGGAATCACTTTTGAAAATTTTCTTCAGATTCTTAAAACCTTCGATATTGAGACGAGGATGCACGTTCGCTTTTTAAACATGGACACTGCAACCATGCGATGTGGGAAATGAGTCCCCGTCTCCTTTAAAATACATCTGGTACTGATGTTTTTACAGAATGAATCTCTCCGGTCTTCCTCTGAGATGAAGccaaatacctttttttttttaaacttattgaTGGGAGATCATAATCCACTGtgatatacagtgtcttcagaaagtattcataccccttgacttttccactgctccagagtccaatggcggcgagctttggACTTTTGACATaaattatattgtattgtgtttaggccagtgacaagAATGTGACAAGAATGTCAacaat

Function

NR:

description
calcineurin B homologous protein 3-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606590.2 True 1113 mRNA 0.46 8 44295614 44309360

Neighbor

gene id symbol gene type direction distance location
LOC110526009 LOC106585233 coding upstream 376 44284852 ~ 44295238 (+)
LOC110526008 NA coding upstream 35490 44259096 ~ 44260124 (+)
LOC118964874 NA coding upstream 300459 43992833 ~ 43995155 (+)
LOC110526005 LOC106585229 coding upstream 313729 43937835 ~ 43981885 (+)
LOC118965079 NA coding upstream 1270916 43023780 ~ 43024698 (+)
LOC110526014 NA coding downstream 28366 44337537 ~ 44339789 (+)
LOC110526013 LOC106585235 coding downstream 36122 44345482 ~ 44348787 (+)
LOC110526020 NA coding downstream 420707 44730067 ~ 44740687 (+)
LOC110526024 suds3 coding downstream 564025 44873385 ~ 44895982 (+)
LOC110526025 srrm4 coding downstream 752298 45061658 ~ 45152985 (+)
G511256 NA non-coding upstream 11019 44284251 ~ 44284595 (+)
G511249 NA non-coding upstream 17307 44277848 ~ 44278307 (+)
G511247 NA non-coding upstream 20798 44274417 ~ 44274816 (+)
G511197 NA non-coding upstream 83696 44209773 ~ 44211918 (+)
G511194 NA non-coding upstream 90026 44205360 ~ 44205588 (+)
G511281 NA non-coding downstream 30560 44339920 ~ 44342925 (+)
G511284 NA non-coding downstream 39765 44349125 ~ 44350035 (+)
G511283 NA non-coding downstream 40888 44350248 ~ 44351084 (+)
G511285 NA non-coding downstream 43190 44352550 ~ 44352753 (+)
G510416 NA other upstream 637121 43657468 ~ 43658493 (+)
G509160 NA other upstream 1725445 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 2163674 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 2824206 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 3436092 40568637 ~ 40886427 (+)
G512192 LOC106584908 other downstream 875079 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 908367 45187119 ~ 45236944 (+)
G512912 NA other downstream 1326229 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1877640 46076084 ~ 46190292 (+)
G513501 NA other downstream 2050596 46359956 ~ 46360585 (+)

Expression


Co-expression Network